RNA–Protein interactions for RNA: ENST00000489108.1

USP48-210, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 443 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-210ENST00000489108 OR52B4Q8NGK2 314 aa12.07□□□□□ -0.48
USP48-210ENST00000489108 SETD6Q8TBK2 473 aa12.07□□□□□ -0.48
USP48-210ENST00000489108 PHLDA1Q8WV24 401 aaPredicted RBP12.07□□□□□ -0.48
USP48-210ENST00000489108 NEDD4LQ96PU5 975 aa12.07□□□□□ -0.48
USP48-210ENST00000489108 PHB2Q99623 299 aa12.07□□□□□ -0.48
USP48-210ENST00000489108 MRPS18AQ9NVS2 196 aaKnown RBP12.07□□□□□ -0.48
USP48-210ENST00000489108 OR1A1Q9P1Q5 309 aa12.07□□□□□ -0.48
USP48-210ENST00000489108 ZNF230Q9UIE0 474 aaPredicted RBP12.07□□□□□ -0.48
USP48-210ENST00000489108 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.06□□□□□ -0.48
USP48-210ENST00000489108 HLA-AP01891 365 aaKnown RBP12.06□□□□□ -0.48
USP48-210ENST00000489108 OR9G9P0C7N8 305 aa12.06□□□□□ -0.48
USP48-210ENST00000489108 BMI1P35226 326 aa12.06□□□□□ -0.48
USP48-210ENST00000489108 CAPGP40121 348 aa12.06□□□□□ -0.48
USP48-210ENST00000489108 ETV1P50549 477 aa12.06□□□□□ -0.48
USP48-210ENST00000489108 RPS11P62280 158 aaKnown RBP eCLIP12.06□□□□□ -0.48
USP48-210ENST00000489108 PRR20EP86478 221 aa12.06□□□□□ -0.48
USP48-210ENST00000489108 PRR20CP86479 221 aa12.06□□□□□ -0.48
USP48-210ENST00000489108 PRR20DP86480 221 aa12.06□□□□□ -0.48
USP48-210ENST00000489108 PRR20BP86481 221 aa12.06□□□□□ -0.48
USP48-210ENST00000489108 PRR20AP86496 221 aa12.06□□□□□ -0.48
USP48-210ENST00000489108 MRGPRG-AS1Q2M3A8 158 aa12.06□□□□□ -0.48
USP48-210ENST00000489108 Q499Y3 187 aa12.06□□□□□ -0.48
USP48-210ENST00000489108 ZNF880Q6PDB4 577 aa12.06□□□□□ -0.48
USP48-210ENST00000489108 C6orf201Q7Z4U5 140 aa12.06□□□□□ -0.48
USP48-210ENST00000489108 TMEM61Q8N0U2 210 aa12.06□□□□□ -0.48
USP48-210ENST00000489108 RHOXF1Q8NHV9 184 aa12.06□□□□□ -0.48
USP48-210ENST00000489108 KCNG3Q8TAE7 436 aa12.06□□□□□ -0.48
USP48-210ENST00000489108 CACNG8Q8WXS5 425 aa12.06□□□□□ -0.48
USP48-210ENST00000489108 SMIM19Q96E16 107 aa12.06□□□□□ -0.48
USP48-210ENST00000489108 Q96MT0 163 aa12.06□□□□□ -0.48
USP48-210ENST00000489108 CHMP1AQ9HD42 196 aaPredicted RBP12.06□□□□□ -0.48
USP48-210ENST00000489108 SLC35D1Q9NTN3 355 aa12.06□□□□□ -0.48
USP48-210ENST00000489108 ORC6Q9Y5N6 252 aa12.06□□□□□ -0.48
USP48-210ENST00000489108 PPP5D1E7EU14 171 aa12.05□□□□□ -0.48
USP48-210ENST00000489108 OR2C1O95371 312 aa12.05□□□□□ -0.48
USP48-210ENST00000489108 NAPSAO96009 420 aa12.05□□□□□ -0.48
USP48-210ENST00000489108 LALBAP00709 142 aa12.05□□□□□ -0.48
USP48-210ENST00000489108 ATF4P18848 351 aaPredicted RBP12.05□□□□□ -0.48
USP48-210ENST00000489108 CBLN1P23435 193 aa12.05□□□□□ -0.48
USP48-210ENST00000489108 ZNF45Q02386 682 aa12.05□□□□□ -0.48
USP48-210ENST00000489108 CDH26Q8IXH8 852 aa12.05□□□□□ -0.48
USP48-210ENST00000489108 EDARADDQ8WWZ3 215 aa12.05□□□□□ -0.48
USP48-210ENST00000489108 THRSPQ92748 146 aa12.05□□□□□ -0.48
USP48-210ENST00000489108 ZNF221Q9UK13 617 aa12.05□□□□□ -0.48
USP48-210ENST00000489108 TP53TG1Q9Y2A0 90 aa12.05□□□□□ -0.48
USP48-210ENST00000489108 DMRT1Q9Y5R6 373 aa12.05□□□□□ -0.48
USP48-210ENST00000489108 MUC4Q99102 2169 aa12.05□□□□□ -0.48
USP48-210ENST00000489108 TRBV5-7A0A0A0MS05 114 aa12.04□□□□□ -0.48
USP48-210ENST00000489108 FAM223BA6NKX1 122 aa12.04□□□□□ -0.48
USP48-210ENST00000489108 SRRM4A7MD48 611 aaKnown RBP12.04□□□□□ -0.48
USP48-210ENST00000489108 M0R1X1 148 aa12.04□□□□□ -0.48
USP48-210ENST00000489108 SCAF4O95104 1147 aaKnown RBP12.04□□□□□ -0.48
USP48-210ENST00000489108 ZBTB25P24278 435 aa12.04□□□□□ -0.48
USP48-210ENST00000489108 DEFB135Q30KP9 77 aa12.04□□□□□ -0.48
USP48-210ENST00000489108 TM4SF20Q53R12 229 aa12.04□□□□□ -0.48
USP48-210ENST00000489108 ZNF57Q68EA5 555 aaPredicted RBP12.04□□□□□ -0.48
USP48-210ENST00000489108 OR10K2Q6IF99 312 aa12.04□□□□□ -0.48
USP48-210ENST00000489108 Q6ZWC4 215 aa12.04□□□□□ -0.48
USP48-210ENST00000489108 FAM223AQ8IWN6 122 aa12.04□□□□□ -0.48
USP48-210ENST00000489108 PTX4Q96A99 478 aa12.04□□□□□ -0.48
USP48-210ENST00000489108 FGF20Q9NP95 211 aaPredicted RBP12.04□□□□□ -0.48
USP48-210ENST00000489108 BABAM2Q9NXR7 383 aa12.04□□□□□ -0.48
USP48-210ENST00000489108 RPL36Q9Y3U8 105 aaKnown RBP12.04□□□□□ -0.48
USP48-210ENST00000489108 TRBV9A0A0B4J1U6 114 aa12.03□□□□□ -0.48
USP48-210ENST00000489108 LGALS9O00182 355 aa12.03□□□□□ -0.48
USP48-210ENST00000489108 EI24O14681 340 aa12.03□□□□□ -0.48
USP48-210ENST00000489108 ATP8B1O43520 1251 aa12.03□□□□□ -0.48
USP48-210ENST00000489108 TUSC2O75896 110 aa12.03□□□□□ -0.48
USP48-210ENST00000489108 TMPRSS11AQ6ZMR5 421 aa12.03□□□□□ -0.48
USP48-210ENST00000489108 ZFP41Q8N8Y5 198 aa12.03□□□□□ -0.48
USP48-210ENST00000489108 HARBI1Q96MB7 349 aa12.03□□□□□ -0.48
USP48-210ENST00000489108 MLXQ9UH92 298 aa12.03□□□□□ -0.48
USP48-210ENST00000489108 DYNC1I1O14576 645 aa12.02□□□□□ -0.49
USP48-210ENST00000489108 MPPED1O15442 326 aa12.02□□□□□ -0.49
USP48-210ENST00000489108 GGCTO75223 188 aaKnown RBP12.02□□□□□ -0.49
USP48-210ENST00000489108 SCTP09683 121 aa12.02□□□□□ -0.49
USP48-210ENST00000489108 HTR2CP28335 458 aa12.02□□□□□ -0.49
USP48-210ENST00000489108 TNXAQ16473 311 aa12.02□□□□□ -0.49
USP48-210ENST00000489108 ANKRD55Q3KP44 614 aa12.02□□□□□ -0.49
USP48-210ENST00000489108 YIF1BQ5BJH7 314 aa12.02□□□□□ -0.49
USP48-210ENST00000489108 SHOXO15266 292 aa12.01□□□□□ -0.49
USP48-210ENST00000489108 APOC4P55056 127 aa12.01□□□□□ -0.49
USP48-210ENST00000489108 C1orf146Q5VVC0 180 aa12.01□□□□□ -0.49
USP48-210ENST00000489108 MOB1BQ7L9L4 216 aa12.01□□□□□ -0.49
USP48-210ENST00000489108 GPHB5Q86YW7 130 aa12.01□□□□□ -0.49
USP48-210ENST00000489108 TMEM217Q8N7C4 229 aa12.01□□□□□ -0.49
USP48-210ENST00000489108 UXS1Q8NBZ7 420 aa12.01□□□□□ -0.49
USP48-210ENST00000489108 NECAP1Q8NC96 275 aa12.01□□□□□ -0.49
USP48-210ENST00000489108 SRSF12Q8WXF0 261 aaKnown RBP12.01□□□□□ -0.49
USP48-210ENST00000489108 RNF183Q96D59 192 aa12.01□□□□□ -0.49
USP48-210ENST00000489108 PGLYRP3Q96LB9 341 aa12.01□□□□□ -0.49
USP48-210ENST00000489108 UQCC2Q9BRT2 126 aa12.01□□□□□ -0.49
USP48-210ENST00000489108 HDHD3Q9BSH5 251 aaPredicted RBP12.01□□□□□ -0.49
USP48-210ENST00000489108 GHRLQ9UBU3 117 aa12.01□□□□□ -0.49
USP48-210ENST00000489108 EXOSC1Q9Y3B2 195 aaKnown RBP12.01□□□□□ -0.49
USP48-210ENST00000489108 DNAH6Q9C0G6 4158 aa12□□□□□ -0.49
USP48-210ENST00000489108 OR2J3O76001 311 aa12□□□□□ -0.49
USP48-210ENST00000489108 RPS27AP62979 156 aaKnown RBP12□□□□□ -0.49
USP48-210ENST00000489108 HLA-DRB3P79483 266 aa12□□□□□ -0.49
USP48-210ENST00000489108 SMN1Q16637 294 aaKnown RBP12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms