RNA–Protein interactions for RNA: ENST00000487026.5

LIME1-206, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LIME1, Length 805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-206ENST00000487026 SORL1Q92673 2214 aa18.94■□□□□ 0.62
LIME1-206ENST00000487026 A0A075B6Q4 140 aa18.94■□□□□ 0.62
LIME1-206ENST00000487026 SHISA3A0PJX4 238 aa18.94■□□□□ 0.62
LIME1-206ENST00000487026 ARPC1BO15143 372 aaKnown RBP18.94■□□□□ 0.62
LIME1-206ENST00000487026 FABP7O15540 132 aa18.94■□□□□ 0.62
LIME1-206ENST00000487026 SLC25A17O43808 307 aa18.94■□□□□ 0.62
LIME1-206ENST00000487026 APOA2P02652 100 aa18.94■□□□□ 0.62
LIME1-206ENST00000487026 OR8U9P0C7N5 309 aa18.94■□□□□ 0.62
LIME1-206ENST00000487026 GSTT2P0CG29 244 aa18.94■□□□□ 0.62
LIME1-206ENST00000487026 GSTT2BP0CG30 244 aa18.94■□□□□ 0.62
LIME1-206ENST00000487026 PSMD7P51665 324 aa18.94■□□□□ 0.62
LIME1-206ENST00000487026 TPPP2P59282 170 aa18.94■□□□□ 0.62
LIME1-206ENST00000487026 MRPS15P82914 257 aaKnown RBP18.94■□□□□ 0.62
LIME1-206ENST00000487026 OR4A4PQ8NGN8 299 aa18.94■□□□□ 0.62
LIME1-206ENST00000487026 GRPEL2Q8TAA5 225 aa18.94■□□□□ 0.62
LIME1-206ENST00000487026 FLYWCH2Q96CP2 140 aaKnown RBP18.94■□□□□ 0.62
LIME1-206ENST00000487026 CNBD2Q96M20 576 aa18.94■□□□□ 0.62
LIME1-206ENST00000487026 GNB3P16520 340 aa18.93■□□□□ 0.62
LIME1-206ENST00000487026 FXYD3Q14802 87 aa18.93■□□□□ 0.62
LIME1-206ENST00000487026 PYHIN1Q6K0P9 492 aa18.93■□□□□ 0.62
LIME1-206ENST00000487026 IZUMO2Q6UXV1 221 aa18.93■□□□□ 0.62
LIME1-206ENST00000487026 PDPNQ86YL7 162 aa18.93■□□□□ 0.62
LIME1-206ENST00000487026 ARPC1AQ92747 370 aa18.93■□□□□ 0.62
LIME1-206ENST00000487026 SLC35D1Q9NTN3 355 aa18.93■□□□□ 0.62
LIME1-206ENST00000487026 ZNF230Q9UIE0 474 aaPredicted RBP18.93■□□□□ 0.62
LIME1-206ENST00000487026 RYR3Q15413 4870 aa18.93■□□□□ 0.62
LIME1-206ENST00000487026 A0A0B4J203 849 aa18.92■□□□□ 0.62
LIME1-206ENST00000487026 TRGV3P03979 118 aa18.92■□□□□ 0.62
LIME1-206ENST00000487026 FCGR3AP08637 254 aa18.92■□□□□ 0.62
LIME1-206ENST00000487026 SPNP16150 400 aa18.92■□□□□ 0.62
LIME1-206ENST00000487026 PJVKQ0ZLH3 352 aa18.92■□□□□ 0.62
LIME1-206ENST00000487026 OR5T1Q8NG75 326 aa18.92■□□□□ 0.62
LIME1-206ENST00000487026 OR10R2Q8NGX6 335 aa18.92■□□□□ 0.62
LIME1-206ENST00000487026 RHOVQ96L33 236 aa18.92■□□□□ 0.62
LIME1-206ENST00000487026 OR2D2Q9H210 308 aa18.92■□□□□ 0.62
LIME1-206ENST00000487026 ZNF355PQ9NSJ1 428 aa18.92■□□□□ 0.62
LIME1-206ENST00000487026 SDHAF2Q9NX18 166 aa18.92■□□□□ 0.62
LIME1-206ENST00000487026 SMAD5-AS1Q9Y6J3 95 aa18.92■□□□□ 0.62
LIME1-206ENST00000487026 PDCD5O14737 125 aa18.91■□□□□ 0.62
LIME1-206ENST00000487026 SPDEFO95238 335 aa18.91■□□□□ 0.62
LIME1-206ENST00000487026 IGLV2-23P01705 113 aa18.91■□□□□ 0.62
LIME1-206ENST00000487026 HSPB1P04792 205 aaKnown RBP18.91■□□□□ 0.62
LIME1-206ENST00000487026 CD40LGP29965 261 aa18.91■□□□□ 0.62
LIME1-206ENST00000487026 SERPINB10P48595 397 aa18.91■□□□□ 0.62
LIME1-206ENST00000487026 TBCEQ15813 527 aaPredicted RBP18.91■□□□□ 0.62
LIME1-206ENST00000487026 ACSM6Q6P461 480 aa18.91■□□□□ 0.62
LIME1-206ENST00000487026 ZNF367Q7RTV3 350 aa18.91■□□□□ 0.62
LIME1-206ENST00000487026 ZNF436-AS1Q8NC38 126 aaPredicted RBP18.91■□□□□ 0.62
LIME1-206ENST00000487026 OR10J5Q8NHC4 309 aa18.91■□□□□ 0.62
LIME1-206ENST00000487026 C5orf30Q96GV9 206 aa18.91■□□□□ 0.62
LIME1-206ENST00000487026 HUWE1Q7Z6Z7 4374 aaKnown RBP18.91■□□□□ 0.62
LIME1-206ENST00000487026 TRBV6-7A0A0A0MS04 114 aa18.9■□□□□ 0.62
LIME1-206ENST00000487026 TRAV1-2A0A0B4J238 106 aa18.9■□□□□ 0.62
LIME1-206ENST00000487026 IFITM5A6NNB3 132 aa18.9■□□□□ 0.62
LIME1-206ENST00000487026 CNIH1O95406 144 aa18.9■□□□□ 0.62
LIME1-206ENST00000487026 RANBP1P43487 201 aa18.9■□□□□ 0.62
LIME1-206ENST00000487026 SSBP2P81877 361 aaPredicted RBP18.9■□□□□ 0.62
LIME1-206ENST00000487026 CABLES2Q9BTV7 478 aa18.9■□□□□ 0.62
LIME1-206ENST00000487026 RAB27BO00194 218 aa18.89■□□□□ 0.61
LIME1-206ENST00000487026 VCX3BQ9H321 246 aa18.89■□□□□ 0.61
LIME1-206ENST00000487026 SLA2Q9H6Q3 261 aa18.89■□□□□ 0.61
LIME1-206ENST00000487026 STAB2Q8WWQ8 2551 aa18.88■□□□□ 0.61
LIME1-206ENST00000487026 MFNGO00587 321 aa18.88■□□□□ 0.61
LIME1-206ENST00000487026 CRYGBP07316 175 aa18.88■□□□□ 0.61
LIME1-206ENST00000487026 GADD45AP24522 165 aa18.88■□□□□ 0.61
LIME1-206ENST00000487026 OVCH2Q7RTZ1 564 aa18.88■□□□□ 0.61
LIME1-206ENST00000487026 HAPLN4Q86UW8 402 aa18.88■□□□□ 0.61
LIME1-206ENST00000487026 BVESQ8NE79 360 aa18.88■□□□□ 0.61
LIME1-206ENST00000487026 NDUFB11Q9NX14 153 aa18.88■□□□□ 0.61
LIME1-206ENST00000487026 ELF5Q9UKW6 265 aaPredicted RBP18.88■□□□□ 0.61
LIME1-206ENST00000487026 TRDV1A0A1B0GX56 115 aa18.87■□□□□ 0.61
LIME1-206ENST00000487026 SMIM30A4D0T7 59 aa18.87■□□□□ 0.61
LIME1-206ENST00000487026 SRRM4A7MD48 611 aaKnown RBP18.87■□□□□ 0.61
LIME1-206ENST00000487026 HIST1H1DP16402 221 aaKnown RBP18.87■□□□□ 0.61
LIME1-206ENST00000487026 RAB3BP20337 219 aa18.87■□□□□ 0.61
LIME1-206ENST00000487026 MYL9P24844 172 aa18.87■□□□□ 0.61
LIME1-206ENST00000487026 LGALS7P47929 136 aa18.87■□□□□ 0.61
LIME1-206ENST00000487026 PITPNAQ00169 270 aa18.87■□□□□ 0.61
LIME1-206ENST00000487026 C22orf42Q6IC83 251 aa18.87■□□□□ 0.61
LIME1-206ENST00000487026 SBSPONQ8IVN8 264 aa18.87■□□□□ 0.61
LIME1-206ENST00000487026 POC5Q8NA72 575 aa18.87■□□□□ 0.61
LIME1-206ENST00000487026 HARBI1Q96MB7 349 aa18.87■□□□□ 0.61
LIME1-206ENST00000487026 BLOC1S6Q9UL45 172 aa18.87■□□□□ 0.61
LIME1-206ENST00000487026 RBM7Q9Y580 266 aaKnown RBP18.87■□□□□ 0.61
LIME1-206ENST00000487026 IGKV1D-8A0A087WSZ0 117 aa18.86■□□□□ 0.61
LIME1-206ENST00000487026 ANKRD34BA5PLL1 514 aa18.86■□□□□ 0.61
LIME1-206ENST00000487026 GP9P14770 177 aa18.86■□□□□ 0.61
LIME1-206ENST00000487026 RAB6AP20340 208 aa18.86■□□□□ 0.61
LIME1-206ENST00000487026 HSPA13P48723 471 aa18.86■□□□□ 0.61
LIME1-206ENST00000487026 ARFRP1Q13795 201 aa18.86■□□□□ 0.61
LIME1-206ENST00000487026 NR2C2APQ86WQ0 139 aa18.86■□□□□ 0.61
LIME1-206ENST00000487026 OR4C12Q96R67 309 aa18.86■□□□□ 0.61
LIME1-206ENST00000487026 GINS4Q9BRT9 223 aa18.86■□□□□ 0.61
LIME1-206ENST00000487026 C13orf42A0A1B0GVH6 325 aa18.85■□□□□ 0.61
LIME1-206ENST00000487026 TRIM64CA6NLI5 447 aa18.85■□□□□ 0.61
LIME1-206ENST00000487026 SHOXO15266 292 aa18.85■□□□□ 0.61
LIME1-206ENST00000487026 TALDO1P37837 337 aa18.85■□□□□ 0.61
LIME1-206ENST00000487026 DEFA5Q01523 94 aa18.85■□□□□ 0.61
LIME1-206ENST00000487026 OR6Q1Q8NGQ2 317 aa18.85■□□□□ 0.61
LIME1-206ENST00000487026 ATG5Q9H1Y0 275 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms