RNA–Protein interactions for RNA: ENST00000485842.5

HPS4-214, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-214ENST00000485842 SRSF4Q08170 494 aaKnown RBP9.41□□□□□ -0.9
HPS4-214ENST00000485842 DYRK1AQ13627 763 aa9.41□□□□□ -0.9
HPS4-214ENST00000485842 PYHIN1Q6K0P9 492 aa9.41□□□□□ -0.9
HPS4-214ENST00000485842 OVCH2Q7RTZ1 564 aa9.41□□□□□ -0.9
HPS4-214ENST00000485842 LYSMD2Q8IV50 215 aa9.41□□□□□ -0.9
HPS4-214ENST00000485842 Q8N9W7 124 aa9.41□□□□□ -0.9
HPS4-214ENST00000485842 OR8H1Q8NGG4 311 aa9.41□□□□□ -0.9
HPS4-214ENST00000485842 SMIM4Q8WVI0 70 aa9.41□□□□□ -0.9
HPS4-214ENST00000485842 RASL11BQ9BPW5 248 aa9.41□□□□□ -0.9
HPS4-214ENST00000485842 ZNF2Q9BSG1 426 aaPredicted RBP9.41□□□□□ -0.9
HPS4-214ENST00000485842 SLC5A7Q9GZV3 580 aa9.41□□□□□ -0.9
HPS4-214ENST00000485842 CCL28Q9NRJ3 127 aa9.41□□□□□ -0.9
HPS4-214ENST00000485842 SERTAD4Q9NUC0 356 aa9.41□□□□□ -0.9
HPS4-214ENST00000485842 KIAA1456Q9P272 454 aa9.41□□□□□ -0.9
HPS4-214ENST00000485842 MTFP1Q9UDX5 166 aa9.41□□□□□ -0.9
HPS4-214ENST00000485842 GAB2Q9UQC2 676 aa9.41□□□□□ -0.9
HPS4-214ENST00000485842 RBMX2Q9Y388 322 aaKnown RBP9.41□□□□□ -0.9
HPS4-214ENST00000485842 FABP12A6NFH5 140 aa9.4□□□□□ -0.9
HPS4-214ENST00000485842 LINC00473A8K010 186 aa9.4□□□□□ -0.9
HPS4-214ENST00000485842 TNFSF12O43508 249 aa9.4□□□□□ -0.9
HPS4-214ENST00000485842 SLC22A5O76082 557 aa9.4□□□□□ -0.9
HPS4-214ENST00000485842 DUTP33316 252 aaKnown RBP9.4□□□□□ -0.9
HPS4-214ENST00000485842 KRTAP10-3P60369 221 aa9.4□□□□□ -0.9
HPS4-214ENST00000485842 TSPAN5P62079 268 aa9.4□□□□□ -0.9
HPS4-214ENST00000485842 RPS16P62249 146 aaKnown RBP9.4□□□□□ -0.9
HPS4-214ENST00000485842 MRPS10P82664 201 aaKnown RBP9.4□□□□□ -0.9
HPS4-214ENST00000485842 CBX3Q13185 183 aa9.4□□□□□ -0.9
HPS4-214ENST00000485842 PLGLAQ15195 96 aa9.4□□□□□ -0.9
HPS4-214ENST00000485842 RTL8BQ17RB0 113 aa9.4□□□□□ -0.9
HPS4-214ENST00000485842 ACTBL2Q562R1 376 aa9.4□□□□□ -0.9
HPS4-214ENST00000485842 SHISA2Q6UWI4 295 aa9.4□□□□□ -0.9
HPS4-214ENST00000485842 KCTD9Q7L273 389 aa9.4□□□□□ -0.9
HPS4-214ENST00000485842 PDPNQ86YL7 162 aa9.4□□□□□ -0.9
HPS4-214ENST00000485842 FAM71E2Q8N5Q1 922 aa9.4□□□□□ -0.9
HPS4-214ENST00000485842 BVESQ8NE79 360 aa9.4□□□□□ -0.9
HPS4-214ENST00000485842 GIMAP1Q8WWP7 306 aa9.4□□□□□ -0.9
HPS4-214ENST00000485842 ADTRPQ96IZ2 230 aa9.4□□□□□ -0.9
HPS4-214ENST00000485842 FXYD6Q9H0Q3 95 aa9.4□□□□□ -0.9
HPS4-214ENST00000485842 PLSCR3Q9NRY6 295 aa9.4□□□□□ -0.9
HPS4-214ENST00000485842 LIN7CQ9NUP9 197 aaKnown RBP9.4□□□□□ -0.9
HPS4-214ENST00000485842 TAS2R8Q9NYW2 309 aa9.4□□□□□ -0.9
HPS4-214ENST00000485842 RABL2AQ9UBK7 228 aaPredicted RBP9.4□□□□□ -0.9
HPS4-214ENST00000485842 RABL2BQ9UNT1 228 aa9.4□□□□□ -0.9
HPS4-214ENST00000485842 A3GALT2U3KPV4 340 aa9.4□□□□□ -0.9
HPS4-214ENST00000485842 CD3DP04234 171 aa9.39□□□□□ -0.91
HPS4-214ENST00000485842 IGKV1-16P04430 117 aa9.39□□□□□ -0.91
HPS4-214ENST00000485842 RNASE10Q5GAN6 216 aaKnown RBP9.39□□□□□ -0.91
HPS4-214ENST00000485842 OR2B11Q5JQS5 317 aa9.39□□□□□ -0.91
HPS4-214ENST00000485842 ZNF660Q6AZW8 331 aaPredicted RBP9.39□□□□□ -0.91
HPS4-214ENST00000485842 SLC35E3Q7Z769 313 aa9.39□□□□□ -0.91
HPS4-214ENST00000485842 C11orf44Q8N8P7 122 aa9.39□□□□□ -0.91
HPS4-214ENST00000485842 OR6F1Q8NGZ6 308 aa9.39□□□□□ -0.91
HPS4-214ENST00000485842 TCTEX1D2Q8WW35 142 aa9.39□□□□□ -0.91
HPS4-214ENST00000485842 MOB3AQ96BX8 217 aa9.39□□□□□ -0.91
HPS4-214ENST00000485842 FLYWCH2Q96CP2 140 aaKnown RBP9.39□□□□□ -0.91
HPS4-214ENST00000485842 HARBI1Q96MB7 349 aa9.39□□□□□ -0.91
HPS4-214ENST00000485842 GPHA2Q96T91 129 aa9.39□□□□□ -0.91
HPS4-214ENST00000485842 TINAGL1Q9GZM7 467 aaPredicted RBP9.39□□□□□ -0.91
HPS4-214ENST00000485842 FBXL15Q9H469 300 aa9.39□□□□□ -0.91
HPS4-214ENST00000485842 RRHO14718 337 aa9.38□□□□□ -0.91
HPS4-214ENST00000485842 CTDSPLO15194 276 aa9.38□□□□□ -0.91
HPS4-214ENST00000485842 NDUFA3O95167 84 aa9.38□□□□□ -0.91
HPS4-214ENST00000485842 CRYZL1O95825 349 aa9.38□□□□□ -0.91
HPS4-214ENST00000485842 IGLV2-14P01704 120 aa9.38□□□□□ -0.91
HPS4-214ENST00000485842 IFNA6P05013 189 aa9.38□□□□□ -0.91
HPS4-214ENST00000485842 RRASP10301 218 aa9.38□□□□□ -0.91
HPS4-214ENST00000485842 TAS2R19P59542 299 aa9.38□□□□□ -0.91
HPS4-214ENST00000485842 RPL30P62888 115 aaKnown RBP9.38□□□□□ -0.91
HPS4-214ENST00000485842 TAGLNQ01995 201 aaKnown RBP9.38□□□□□ -0.91
HPS4-214ENST00000485842 SSBP1Q04837 148 aaKnown RBP9.38□□□□□ -0.91
HPS4-214ENST00000485842 C5orf64Q2M2E5 130 aa9.38□□□□□ -0.91
HPS4-214ENST00000485842 PYDC2Q56P42 97 aa9.38□□□□□ -0.91
HPS4-214ENST00000485842 VAX1Q5SQQ9 334 aa9.38□□□□□ -0.91
HPS4-214ENST00000485842 HIST2H2BDQ6DRA6 164 aa9.38□□□□□ -0.91
HPS4-214ENST00000485842 DHRS11Q6UWP2 260 aa9.38□□□□□ -0.91
HPS4-214ENST00000485842 NPBQ8NG41 125 aa9.38□□□□□ -0.91
HPS4-214ENST00000485842 DDB2Q92466 427 aa9.38□□□□□ -0.91
HPS4-214ENST00000485842 TSNAXQ99598 290 aaKnown RBP9.38□□□□□ -0.91
HPS4-214ENST00000485842 HSD17B10Q99714 261 aaKnown RBP9.38□□□□□ -0.91
HPS4-214ENST00000485842 HSPB9Q9BQS6 159 aa9.38□□□□□ -0.91
HPS4-214ENST00000485842 ZNF107Q9UII5 783 aaPredicted RBP9.38□□□□□ -0.91
HPS4-214ENST00000485842 LINC00527Q9UJ94 153 aa9.38□□□□□ -0.91
HPS4-214ENST00000485842 PRELID3BQ9Y3B1 194 aa9.38□□□□□ -0.91
HPS4-214ENST00000485842 V9GYH0 126 aa9.38□□□□□ -0.91
HPS4-214ENST00000485842 LINC01548A6NM66 108 aa9.37□□□□□ -0.91
HPS4-214ENST00000485842 SHOXO15266 292 aa9.37□□□□□ -0.91
HPS4-214ENST00000485842 KCNAB3O43448 404 aa9.37□□□□□ -0.91
HPS4-214ENST00000485842 SLC25A17O43808 307 aa9.37□□□□□ -0.91
HPS4-214ENST00000485842 FCGR3BO75015 233 aa9.37□□□□□ -0.91
HPS4-214ENST00000485842 RAB3DO95716 219 aa9.37□□□□□ -0.91
HPS4-214ENST00000485842 IGHG2P01859 326 aa9.37□□□□□ -0.91
HPS4-214ENST00000485842 CSF1P09603 554 aa9.37□□□□□ -0.91
HPS4-214ENST00000485842 TBPP20226 339 aa9.37□□□□□ -0.91
HPS4-214ENST00000485842 PSG5Q15238 335 aa9.37□□□□□ -0.91
HPS4-214ENST00000485842 MSMO1Q15800 293 aa9.37□□□□□ -0.91
HPS4-214ENST00000485842 ZNF66Q6ZN08 573 aa9.37□□□□□ -0.91
HPS4-214ENST00000485842 ZNF818PQ6ZRF7 136 aa9.37□□□□□ -0.91
HPS4-214ENST00000485842 CCDC190Q86UF4 302 aa9.37□□□□□ -0.91
HPS4-214ENST00000485842 FOXRED2Q8IWF2 684 aa9.37□□□□□ -0.91
HPS4-214ENST00000485842 MFSD4AQ8N468 514 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms