RNA–Protein interactions for RNA: ENST00000479398.5

PKP4-209, Transcript of plakophilin 4, humanhuman

TSL 5

Gene PKP4, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-209ENST00000479398 HLA-DQB1P01920 261 aa16.24■□□□□ 0.19
PKP4-209ENST00000479398 PTHLHP12272 177 aa16.24■□□□□ 0.19
PKP4-209ENST00000479398 THBS3P49746 956 aa16.24■□□□□ 0.19
PKP4-209ENST00000479398 LUMP51884 338 aaPredicted RBP16.24■□□□□ 0.19
PKP4-209ENST00000479398 PLGLAQ15195 96 aa16.24■□□□□ 0.19
PKP4-209ENST00000479398 CXorf66Q5JRM2 361 aaPredicted RBP16.24■□□□□ 0.19
PKP4-209ENST00000479398 GVQW1Q8N7I0 195 aa16.24■□□□□ 0.19
PKP4-209ENST00000479398 RNF152Q8N8N0 203 aa16.24■□□□□ 0.19
PKP4-209ENST00000479398 BEST4Q8NFU0 473 aa16.24■□□□□ 0.19
PKP4-209ENST00000479398 METTL1Q9UBP6 276 aaKnown RBP16.24■□□□□ 0.19
PKP4-209ENST00000479398 MEGF8Q7Z7M0 2845 aa16.23■□□□□ 0.19
PKP4-209ENST00000479398 NOTCH1P46531 2555 aa16.23■□□□□ 0.19
PKP4-209ENST00000479398 G3V318 75 aa16.23■□□□□ 0.19
PKP4-209ENST00000479398 PF4P02776 101 aa16.23■□□□□ 0.19
PKP4-209ENST00000479398 RPLP1P05386 114 aaKnown RBP16.23■□□□□ 0.19
PKP4-209ENST00000479398 PPIFP30405 207 aaKnown RBP16.23■□□□□ 0.19
PKP4-209ENST00000479398 SLC6A1P30531 599 aa16.23■□□□□ 0.19
PKP4-209ENST00000479398 CX3CL1P78423 397 aa16.23■□□□□ 0.19
PKP4-209ENST00000479398 SAMD5Q5TGI4 173 aa16.23■□□□□ 0.19
PKP4-209ENST00000479398 C18orf65Q6ZTR6 163 aa16.23■□□□□ 0.19
PKP4-209ENST00000479398 ADTRPQ96IZ2 230 aa16.23■□□□□ 0.19
PKP4-209ENST00000479398 MRPS26Q9BYN8 205 aaKnown RBP16.23■□□□□ 0.19
PKP4-209ENST00000479398 PARP11Q9NR21 331 aa16.23■□□□□ 0.19
PKP4-209ENST00000479398 NOTCH3Q9UM47 2321 aa16.23■□□□□ 0.19
PKP4-209ENST00000479398 SPDEFO95238 335 aa16.22■□□□□ 0.19
PKP4-209ENST00000479398 RRASP10301 218 aa16.22■□□□□ 0.19
PKP4-209ENST00000479398 CD33P20138 364 aa16.22■□□□□ 0.19
PKP4-209ENST00000479398 DUTP33316 252 aaKnown RBP16.22■□□□□ 0.19
PKP4-209ENST00000479398 CBX5P45973 191 aa16.22■□□□□ 0.19
PKP4-209ENST00000479398 LGALS7P47929 136 aa16.22■□□□□ 0.19
PKP4-209ENST00000479398 CTF1Q16619 201 aa16.22■□□□□ 0.19
PKP4-209ENST00000479398 GPR107Q5VW38 600 aa16.22■□□□□ 0.19
PKP4-209ENST00000479398 LCNL1Q6ZST4 164 aa16.22■□□□□ 0.19
PKP4-209ENST00000479398 ZNF695Q8IW36 515 aa16.22■□□□□ 0.19
PKP4-209ENST00000479398 ZNF645Q8N7E2 425 aa16.22■□□□□ 0.19
PKP4-209ENST00000479398 BVESQ8NE79 360 aa16.22■□□□□ 0.19
PKP4-209ENST00000479398 CLCC1Q96S66 551 aa16.22■□□□□ 0.19
PKP4-209ENST00000479398 NAA50Q9GZZ1 169 aaKnown RBP16.22■□□□□ 0.19
PKP4-209ENST00000479398 COMMD3Q9UBI1 195 aa16.22■□□□□ 0.19
PKP4-209ENST00000479398 TRAV41A0A0B4J266 112 aa16.21■□□□□ 0.19
PKP4-209ENST00000479398 NUDT19A8MXV4 375 aa16.21■□□□□ 0.19
PKP4-209ENST00000479398 TUSC2O75896 110 aa16.21■□□□□ 0.19
PKP4-209ENST00000479398 SLC22A5O76082 557 aa16.21■□□□□ 0.19
PKP4-209ENST00000479398 PSMB8P28062 276 aa16.21■□□□□ 0.19
PKP4-209ENST00000479398 CDX1P47902 265 aaPredicted RBP16.21■□□□□ 0.19
PKP4-209ENST00000479398 ALDH3B2P48448 385 aa16.21■□□□□ 0.19
PKP4-209ENST00000479398 RORCP51449 518 aa16.21■□□□□ 0.19
PKP4-209ENST00000479398 ARPC4P59998 168 aa16.21■□□□□ 0.19
PKP4-209ENST00000479398 OXLD1Q5BKU9 147 aa16.21■□□□□ 0.19
PKP4-209ENST00000479398 TMEM69Q5SWH9 247 aa16.21■□□□□ 0.19
PKP4-209ENST00000479398 ZNF562Q6V9R5 426 aa16.21■□□□□ 0.19
PKP4-209ENST00000479398 C8orf86Q6ZUL3 223 aa16.21■□□□□ 0.19
PKP4-209ENST00000479398 KLHL30-AS1Q8NEE0 82 aa16.21■□□□□ 0.19
PKP4-209ENST00000479398 DDB2Q92466 427 aa16.21■□□□□ 0.19
PKP4-209ENST00000479398 CMTM3Q96MX0 182 aa16.21■□□□□ 0.19
PKP4-209ENST00000479398 FBXO7Q9Y3I1 522 aa16.21■□□□□ 0.19
PKP4-209ENST00000479398 NUBP2Q9Y5Y2 271 aa16.21■□□□□ 0.19
PKP4-209ENST00000479398 IGKV1D-13A0A0B4J2D9 117 aa16.2■□□□□ 0.18
PKP4-209ENST00000479398 LINC00473A8K010 186 aa16.2■□□□□ 0.18
PKP4-209ENST00000479398 WIPF1O43516 503 aa16.2■□□□□ 0.18
PKP4-209ENST00000479398 GABARAPO95166 117 aa16.2■□□□□ 0.18
PKP4-209ENST00000479398 IGLV2-23P01705 113 aa16.2■□□□□ 0.18
PKP4-209ENST00000479398 IGKV1-13P0DP09 117 aa16.2■□□□□ 0.18
PKP4-209ENST00000479398 EGR2P11161 476 aaPredicted RBP16.2■□□□□ 0.18
PKP4-209ENST00000479398 CRIP2P52943 208 aaPredicted RBP16.2■□□□□ 0.18
PKP4-209ENST00000479398 TAS2R20P59543 309 aa16.2■□□□□ 0.18
PKP4-209ENST00000479398 NDPQ00604 133 aa16.2■□□□□ 0.18
PKP4-209ENST00000479398 CBX3Q13185 183 aa16.2■□□□□ 0.18
PKP4-209ENST00000479398 RTL8BQ17RB0 113 aa16.2■□□□□ 0.18
PKP4-209ENST00000479398 BEAN1Q3B7T3 259 aa16.2■□□□□ 0.18
PKP4-209ENST00000479398 TMEM177Q53S58 311 aa16.2■□□□□ 0.18
PKP4-209ENST00000479398 MINDY2Q8NBR6 621 aa16.2■□□□□ 0.18
PKP4-209ENST00000479398 ACOT12Q8WYK0 555 aa16.2■□□□□ 0.18
PKP4-209ENST00000479398 MEIS3P1A6NDR6 274 aa16.19■□□□□ 0.18
PKP4-209ENST00000479398 SLC25A17O43808 307 aa16.19■□□□□ 0.18
PKP4-209ENST00000479398 IGLV1-40P01703 118 aa16.19■□□□□ 0.18
PKP4-209ENST00000479398 IGLV2-14P01704 120 aa16.19■□□□□ 0.18
PKP4-209ENST00000479398 EIF4EP06730 217 aaKnown RBP16.19■□□□□ 0.18
PKP4-209ENST00000479398 FCER2P06734 321 aa16.19■□□□□ 0.18
PKP4-209ENST00000479398 CRYGBP07316 175 aa16.19■□□□□ 0.18
PKP4-209ENST00000479398 FCGR2CP31995 323 aa16.19■□□□□ 0.18
PKP4-209ENST00000479398 MYCNOSP40205 109 aa16.19■□□□□ 0.18
PKP4-209ENST00000479398 TMEM267Q0VDI3 215 aaPredicted RBP16.19■□□□□ 0.18
PKP4-209ENST00000479398 KPRPQ5T749 579 aaPredicted RBP16.19■□□□□ 0.18
PKP4-209ENST00000479398 ETV3LQ6ZN32 361 aa16.19■□□□□ 0.18
PKP4-209ENST00000479398 KLK15Q9H2R5 256 aa16.19■□□□□ 0.18
PKP4-209ENST00000479398 NECAP2Q9NVZ3 263 aa16.19■□□□□ 0.18
PKP4-209ENST00000479398 RBMX2Q9Y388 322 aaKnown RBP16.19■□□□□ 0.18
PKP4-209ENST00000479398 SRRM4A7MD48 611 aaKnown RBP16.18■□□□□ 0.18
PKP4-209ENST00000479398 SHOXO15266 292 aa16.18■□□□□ 0.18
PKP4-209ENST00000479398 CA2P00918 260 aa16.18■□□□□ 0.18
PKP4-209ENST00000479398 APOA1P02647 267 aa16.18■□□□□ 0.18
PKP4-209ENST00000479398 C19orf54Q5BKX5 351 aa16.18■□□□□ 0.18
PKP4-209ENST00000479398 TMEM65Q6PI78 240 aa16.18■□□□□ 0.18
PKP4-209ENST00000479398 GPR141Q7Z602 305 aa16.18■□□□□ 0.18
PKP4-209ENST00000479398 PPP1R27Q86WC6 154 aa16.18■□□□□ 0.18
PKP4-209ENST00000479398 MRPL41Q8IXM3 137 aaKnown RBP16.18■□□□□ 0.18
PKP4-209ENST00000479398 LINC00482Q8N8I6 264 aa16.18■□□□□ 0.18
PKP4-209ENST00000479398 OR5AP2Q8NGF4 316 aa16.18■□□□□ 0.18
PKP4-209ENST00000479398 SNAPC3Q92966 411 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms