RNA–Protein interactions for RNA: ENST00000478896.2

VCL-205, Transcript of vinculin, humanhuman

TSL 5

Gene VCL, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-205ENST00000478896 OR9G4Q8NGQ1 327 aa10.14□□□□□ -0.79
VCL-205ENST00000478896 FBLIM1Q8WUP2 373 aa10.14□□□□□ -0.79
VCL-205ENST00000478896 UFD1Q92890 307 aa10.14□□□□□ -0.79
VCL-205ENST00000478896 PTX4Q96A99 478 aa10.14□□□□□ -0.79
VCL-205ENST00000478896 ARHGAP5-AS1Q96IT6 56 aa10.14□□□□□ -0.79
VCL-205ENST00000478896 HARBI1Q96MB7 349 aa10.14□□□□□ -0.79
VCL-205ENST00000478896 PHB2Q99623 299 aa10.14□□□□□ -0.79
VCL-205ENST00000478896 OR2D2Q9H210 308 aa10.14□□□□□ -0.79
VCL-205ENST00000478896 C19orf73Q9NVV2 129 aa10.14□□□□□ -0.79
VCL-205ENST00000478896 FKBP14Q9NWM8 211 aa10.14□□□□□ -0.79
VCL-205ENST00000478896 HSF4Q9ULV5 492 aa10.14□□□□□ -0.79
VCL-205ENST00000478896 RYR2Q92736 4967 aa10.14□□□□□ -0.79
VCL-205ENST00000478896 DNAH7Q8WXX0 4024 aa10.13□□□□□ -0.79
VCL-205ENST00000478896 A8MZ25 164 aa10.13□□□□□ -0.79
VCL-205ENST00000478896 PTGES3LE9PB15 166 aa10.13□□□□□ -0.79
VCL-205ENST00000478896 SLC17A2O00624 439 aa10.13□□□□□ -0.79
VCL-205ENST00000478896 PROP1O75360 226 aa10.13□□□□□ -0.79
VCL-205ENST00000478896 UCHL1P09936 223 aa10.13□□□□□ -0.79
VCL-205ENST00000478896 LGALS7P47929 136 aa10.13□□□□□ -0.79
VCL-205ENST00000478896 SYNJ2BPP57105 145 aa10.13□□□□□ -0.79
VCL-205ENST00000478896 RAB11BQ15907 218 aa10.13□□□□□ -0.79
VCL-205ENST00000478896 TATDN3Q17R31 274 aa10.13□□□□□ -0.79
VCL-205ENST00000478896 RPEL1Q2QD12 228 aa10.13□□□□□ -0.79
VCL-205ENST00000478896 LIPKQ5VXJ0 399 aa10.13□□□□□ -0.79
VCL-205ENST00000478896 ADAMTSL5Q6ZMM2 481 aa10.13□□□□□ -0.79
VCL-205ENST00000478896 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.13□□□□□ -0.79
VCL-205ENST00000478896 TMEM203Q969S6 136 aa10.13□□□□□ -0.79
VCL-205ENST00000478896 TMEM68Q96MH6 324 aa10.13□□□□□ -0.79
VCL-205ENST00000478896 PECRQ9BY49 303 aa10.13□□□□□ -0.79
VCL-205ENST00000478896 VCXQ9H320 206 aa10.13□□□□□ -0.79
VCL-205ENST00000478896 TUBA4BQ9H853 241 aa10.13□□□□□ -0.79
VCL-205ENST00000478896 EDA2RQ9HAV5 297 aa10.13□□□□□ -0.79
VCL-205ENST00000478896 COA4Q9NYJ1 87 aa10.13□□□□□ -0.79
VCL-205ENST00000478896 AK6Q9Y3D8 172 aaKnown RBP10.13□□□□□ -0.79
VCL-205ENST00000478896 TRDCB7Z8K6 153 aa10.12□□□□□ -0.79
VCL-205ENST00000478896 SHOXO15266 292 aa10.12□□□□□ -0.79
VCL-205ENST00000478896 IFNA6P05013 189 aa10.12□□□□□ -0.79
VCL-205ENST00000478896 HSMCR30P0CW71 290 aa10.12□□□□□ -0.79
VCL-205ENST00000478896 APELAP0DMC3 54 aa10.12□□□□□ -0.79
VCL-205ENST00000478896 AADACP22760 399 aa10.12□□□□□ -0.79
VCL-205ENST00000478896 SERPINB10P48595 397 aa10.12□□□□□ -0.79
VCL-205ENST00000478896 RNLSQ5VYX0 342 aa10.12□□□□□ -0.79
VCL-205ENST00000478896 LCN12Q6JVE5 192 aa10.12□□□□□ -0.79
VCL-205ENST00000478896 FAM89BQ8N5H3 189 aa10.12□□□□□ -0.79
VCL-205ENST00000478896 OR56B1Q8NGI3 324 aa10.12□□□□□ -0.79
VCL-205ENST00000478896 OR4A4PQ8NGN8 299 aa10.12□□□□□ -0.79
VCL-205ENST00000478896 SCN3BQ9NY72 215 aa10.12□□□□□ -0.79
VCL-205ENST00000478896 PEF1Q9UBV8 284 aaKnown RBP10.12□□□□□ -0.79
VCL-205ENST00000478896 RBM7Q9Y580 266 aaKnown RBP10.12□□□□□ -0.79
VCL-205ENST00000478896 A0A0B4J203 849 aa10.11□□□□□ -0.79
VCL-205ENST00000478896 IGKV1-6A0A0C4DH72 117 aa10.11□□□□□ -0.79
VCL-205ENST00000478896 BET1O15155 118 aa10.11□□□□□ -0.79
VCL-205ENST00000478896 MPPED1O15442 326 aa10.11□□□□□ -0.79
VCL-205ENST00000478896 FABP7O15540 132 aa10.11□□□□□ -0.79
VCL-205ENST00000478896 IGLV2-23P01705 113 aa10.11□□□□□ -0.79
VCL-205ENST00000478896 CD3GP09693 182 aa10.11□□□□□ -0.79
VCL-205ENST00000478896 TMEM50BP56557 158 aa10.11□□□□□ -0.79
VCL-205ENST00000478896 CLDN12P56749 244 aa10.11□□□□□ -0.79
VCL-205ENST00000478896 PJVKQ0ZLH3 352 aa10.11□□□□□ -0.79
VCL-205ENST00000478896 KLF5Q13887 457 aaPredicted RBP10.11□□□□□ -0.79
VCL-205ENST00000478896 RTL8BQ17RB0 113 aa10.11□□□□□ -0.79
VCL-205ENST00000478896 BVESQ8NE79 360 aa10.11□□□□□ -0.79
VCL-205ENST00000478896 OR10J5Q8NHC4 309 aa10.11□□□□□ -0.79
VCL-205ENST00000478896 TINAGL1Q9GZM7 467 aaPredicted RBP10.11□□□□□ -0.79
VCL-205ENST00000478896 LSM2Q9Y333 95 aaKnown RBP10.11□□□□□ -0.79
VCL-205ENST00000478896 STAB2Q8WWQ8 2551 aa10.1□□□□□ -0.79
VCL-205ENST00000478896 FOXI3A8MTJ6 420 aaPredicted RBP10.1□□□□□ -0.79
VCL-205ENST00000478896 ARL6IP5O75915 188 aa10.1□□□□□ -0.79
VCL-205ENST00000478896 TRBV12-3P01733 135 aa10.1□□□□□ -0.79
VCL-205ENST00000478896 RANBP1P43487 201 aa10.1□□□□□ -0.79
VCL-205ENST00000478896 RPS25P62851 125 aaKnown RBP10.1□□□□□ -0.79
VCL-205ENST00000478896 SSBP2P81877 361 aaPredicted RBP10.1□□□□□ -0.79
VCL-205ENST00000478896 TNXAQ16473 311 aa10.1□□□□□ -0.79
VCL-205ENST00000478896 HAGHQ16775 308 aa10.1□□□□□ -0.79
VCL-205ENST00000478896 OGFRL1Q5TC84 451 aaPredicted RBP10.1□□□□□ -0.79
VCL-205ENST00000478896 Q8N402 240 aa10.1□□□□□ -0.79
VCL-205ENST00000478896 USMG5Q96IX5 58 aa10.1□□□□□ -0.79
VCL-205ENST00000478896 GFI1Q99684 422 aa10.1□□□□□ -0.79
VCL-205ENST00000478896 SDHAF2Q9NX18 166 aa10.1□□□□□ -0.79
VCL-205ENST00000478896 PEMTQ9UBM1 199 aa10.1□□□□□ -0.79
VCL-205ENST00000478896 ADAM30Q9UKF2 790 aa10.1□□□□□ -0.79
VCL-205ENST00000478896 DENRO43583 198 aaKnown RBP10.09□□□□□ -0.79
VCL-205ENST00000478896 OR2A4O95047 310 aa10.09□□□□□ -0.79
VCL-205ENST00000478896 CD37P11049 281 aa10.09□□□□□ -0.79
VCL-205ENST00000478896 CALRP27797 417 aaKnown RBP10.09□□□□□ -0.79
VCL-205ENST00000478896 TAGLNQ01995 201 aaKnown RBP10.09□□□□□ -0.79
VCL-205ENST00000478896 DYRK1AQ13627 763 aa10.09□□□□□ -0.79
VCL-205ENST00000478896 TRAM1Q15629 374 aa10.09□□□□□ -0.79
VCL-205ENST00000478896 VMA21Q3ZAQ7 101 aa10.09□□□□□ -0.79
VCL-205ENST00000478896 IGSF11Q5DX21 431 aa10.09□□□□□ -0.79
VCL-205ENST00000478896 PLAC9Q5JTB6 97 aa10.09□□□□□ -0.79
VCL-205ENST00000478896 ZNF343Q6P1L6 599 aa10.09□□□□□ -0.79
VCL-205ENST00000478896 ACOT12Q8WYK0 555 aa10.09□□□□□ -0.79
VCL-205ENST00000478896 SNAPC3Q92966 411 aa10.09□□□□□ -0.79
VCL-205ENST00000478896 FAM3DQ96BQ1 224 aa10.09□□□□□ -0.79
VCL-205ENST00000478896 GINS4Q9BRT9 223 aa10.09□□□□□ -0.79
VCL-205ENST00000478896 CABLES2Q9BTV7 478 aa10.09□□□□□ -0.79
VCL-205ENST00000478896 A0A075B6Q4 140 aa10.08□□□□□ -0.8
VCL-205ENST00000478896 SHISA3A0PJX4 238 aa10.08□□□□□ -0.8
VCL-205ENST00000478896 MSGN1A6NI15 193 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms