RNA–Protein interactions for RNA: ENST00000477572.1

VPS50-213, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 504 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-213ENST00000477572 GPR22Q99680 433 aa1.19□□□□□ -2.22
VPS50-213ENST00000477572 C2orf88Q9BSF0 95 aa1.19□□□□□ -2.22
VPS50-213ENST00000477572 TMEM208Q9BTX3 173 aa1.19□□□□□ -2.22
VPS50-213ENST00000477572 MRPS26Q9BYN8 205 aaKnown RBP1.19□□□□□ -2.22
VPS50-213ENST00000477572 ARL6Q9H0F7 186 aa1.19□□□□□ -2.22
VPS50-213ENST00000477572 TRPM3Q9HCF6 1732 aaPredicted RBP1.19□□□□□ -2.22
VPS50-213ENST00000477572 TMEM138Q9NPI0 162 aa1.19□□□□□ -2.22
VPS50-213ENST00000477572 SLC2A9Q9NRM0 540 aa1.19□□□□□ -2.22
VPS50-213ENST00000477572 SDHAF2Q9NX18 166 aa1.19□□□□□ -2.22
VPS50-213ENST00000477572 MRPL16Q9NX20 251 aaKnown RBP1.19□□□□□ -2.22
VPS50-213ENST00000477572 COA4Q9NYJ1 87 aa1.19□□□□□ -2.22
VPS50-213ENST00000477572 DKKL1Q9UK85 242 aa1.19□□□□□ -2.22
VPS50-213ENST00000477572 VPREB3Q9UKI3 123 aa1.19□□□□□ -2.22
VPS50-213ENST00000477572 C14orf166Q9Y224 244 aaKnown RBP1.19□□□□□ -2.22
VPS50-213ENST00000477572 SNX24Q9Y343 169 aa1.19□□□□□ -2.22
VPS50-213ENST00000477572 ALG5Q9Y673 324 aa1.19□□□□□ -2.22
VPS50-213ENST00000477572 ARL5AQ9Y689 179 aa1.19□□□□□ -2.22
VPS50-213ENST00000477572 MYO5BQ9ULV0 1848 aa1.19□□□□□ -2.22
VPS50-213ENST00000477572 AKAP12Q02952 1782 aa1.19□□□□□ -2.22
VPS50-213ENST00000477572 USP42Q9H9J4 1324 aaKnown RBP1.18□□□□□ -2.22
VPS50-213ENST00000477572 SYNMO15061 1565 aa1.18□□□□□ -2.22
VPS50-213ENST00000477572 NOS1P29475 1434 aa1.18□□□□□ -2.22
VPS50-213ENST00000477572 UHRF1BP1Q6BDS2 1440 aa1.18□□□□□ -2.22
VPS50-213ENST00000477572 A0A1B0GU33 70 aa1.18□□□□□ -2.22
VPS50-213ENST00000477572 TINCRA0A1B0GVN0 87 aa1.18□□□□□ -2.22
VPS50-213ENST00000477572 PQLC2LA1A4F0 135 aa1.18□□□□□ -2.22
VPS50-213ENST00000477572 C9orf170A2RU37 121 aa1.18□□□□□ -2.22
VPS50-213ENST00000477572 RBFOX3A6NFN3 312 aa1.18□□□□□ -2.22
VPS50-213ENST00000477572 EFCAB9A8MZ26 197 aa1.18□□□□□ -2.22
VPS50-213ENST00000477572 OR11H12B2RN74 326 aa1.18□□□□□ -2.22
VPS50-213ENST00000477572 G3V3Q6 166 aa1.18□□□□□ -2.22
VPS50-213ENST00000477572 TSTD3H0UI37 97 aa1.18□□□□□ -2.22
VPS50-213ENST00000477572 M0QYV0 167 aa1.18□□□□□ -2.22
VPS50-213ENST00000477572 KPNA4O00629 521 aaPredicted RBP1.18□□□□□ -2.22
VPS50-213ENST00000477572 PLPP3O14495 311 aa1.18□□□□□ -2.22
VPS50-213ENST00000477572 SLC31A1O15431 190 aa1.18□□□□□ -2.22
VPS50-213ENST00000477572 DLEU1O43261 78 aa1.18□□□□□ -2.22
VPS50-213ENST00000477572 CHP2O43745 196 aa1.18□□□□□ -2.22
VPS50-213ENST00000477572 SLC37A4O43826 429 aa1.18□□□□□ -2.22
VPS50-213ENST00000477572 POP7O75817 140 aaKnown RBP1.18□□□□□ -2.22
VPS50-213ENST00000477572 KRT75O95678 551 aa1.18□□□□□ -2.22
VPS50-213ENST00000477572 GPR75O95800 540 aa1.18□□□□□ -2.22
VPS50-213ENST00000477572 HLA-AP01891 365 aaKnown RBP1.18□□□□□ -2.22
VPS50-213ENST00000477572 TYMSP04818 313 aa1.18□□□□□ -2.22
VPS50-213ENST00000477572 ISG15P05161 165 aa1.18□□□□□ -2.22
VPS50-213ENST00000477572 HTR1AP08908 422 aa1.18□□□□□ -2.22
VPS50-213ENST00000477572 CST2P09228 141 aa1.18□□□□□ -2.22
VPS50-213ENST00000477572 LIMS3P0CW19 117 aa1.18□□□□□ -2.22
VPS50-213ENST00000477572 LIMS4P0CW20 117 aa1.18□□□□□ -2.22
VPS50-213ENST00000477572 C8orf88P0DMB2 117 aa1.18□□□□□ -2.22
VPS50-213ENST00000477572 HIST1H1EP10412 219 aaKnown RBP1.18□□□□□ -2.22
VPS50-213ENST00000477572 SCGB1A1P11684 91 aa1.18□□□□□ -2.22
VPS50-213ENST00000477572 GABRA1P14867 456 aa1.18□□□□□ -2.22
VPS50-213ENST00000477572 HIST1H1CP16403 213 aaKnown RBP1.18□□□□□ -2.22
VPS50-213ENST00000477572 UGT2B7P16662 529 aa1.18□□□□□ -2.22
VPS50-213ENST00000477572 ZNF22P17026 224 aaPredicted RBP1.18□□□□□ -2.22
VPS50-213ENST00000477572 AKR1C4P17516 323 aa1.18□□□□□ -2.22
VPS50-213ENST00000477572 PSMA1P25786 263 aaKnown RBP1.18□□□□□ -2.22
VPS50-213ENST00000477572 CCR7P32248 378 aa1.18□□□□□ -2.22
VPS50-213ENST00000477572 MAP2K4P45985 399 aa1.18□□□□□ -2.22
VPS50-213ENST00000477572 GABRA4P48169 554 aa1.18□□□□□ -2.22
VPS50-213ENST00000477572 SRP9P49458 86 aaKnown RBP1.18□□□□□ -2.22
VPS50-213ENST00000477572 TTPAP49638 278 aa1.18□□□□□ -2.22
VPS50-213ENST00000477572 RAB13P51153 203 aa1.18□□□□□ -2.22
VPS50-213ENST00000477572 ZNF83P51522 516 aa1.18□□□□□ -2.22
VPS50-213ENST00000477572 AP2S1P53680 142 aaPredicted RBP1.18□□□□□ -2.22
VPS50-213ENST00000477572 AQP5P55064 265 aa1.18□□□□□ -2.22
VPS50-213ENST00000477572 RAB25P57735 213 aa1.18□□□□□ -2.22
VPS50-213ENST00000477572 GNG2P59768 71 aa1.18□□□□□ -2.22
VPS50-213ENST00000477572 DEFA6Q01524 100 aa1.18□□□□□ -2.22
VPS50-213ENST00000477572 RELAQ04206 551 aa1.18□□□□□ -2.22
VPS50-213ENST00000477572 CST6Q15828 149 aa1.18□□□□□ -2.22
VPS50-213ENST00000477572 MAPK14Q16539 360 aa1.18□□□□□ -2.22
VPS50-213ENST00000477572 DEFB115Q30KQ5 88 aa1.18□□□□□ -2.22
VPS50-213ENST00000477572 SPIN4Q56A73 249 aa1.18□□□□□ -2.22
VPS50-213ENST00000477572 RESP18Q5W5W9 173 aa1.18□□□□□ -2.22
VPS50-213ENST00000477572 LPCAT4Q643R3 524 aa1.18□□□□□ -2.22
VPS50-213ENST00000477572 SSX7Q7RTT5 188 aa1.18□□□□□ -2.22
VPS50-213ENST00000477572 SSX6Q7RTT6 188 aa1.18□□□□□ -2.22
VPS50-213ENST00000477572 TCF24Q7RTU0 167 aa1.18□□□□□ -2.22
VPS50-213ENST00000477572 MARCH3Q86UD3 253 aa1.18□□□□□ -2.22
VPS50-213ENST00000477572 ZNF567Q8N184 647 aa1.18□□□□□ -2.22
VPS50-213ENST00000477572 STX19Q8N4C7 294 aa1.18□□□□□ -2.22
VPS50-213ENST00000477572 SMIM20Q8N5G0 67 aa1.18□□□□□ -2.22
VPS50-213ENST00000477572 OR2M3Q8NG83 312 aa1.18□□□□□ -2.22
VPS50-213ENST00000477572 OR11H1Q8NG94 326 aa1.18□□□□□ -2.22
VPS50-213ENST00000477572 OR5L1Q8NGL2 311 aa1.18□□□□□ -2.22
VPS50-213ENST00000477572 OR6K2Q8NGY2 324 aa1.18□□□□□ -2.22
VPS50-213ENST00000477572 OR11H2Q8NH07 326 aa1.18□□□□□ -2.22
VPS50-213ENST00000477572 STOML3Q8TAV4 291 aa1.18□□□□□ -2.22
VPS50-213ENST00000477572 BLNKQ8WV28 456 aa1.18□□□□□ -2.22
VPS50-213ENST00000477572 RAB8BQ92930 207 aa1.18□□□□□ -2.22
VPS50-213ENST00000477572 TMBIM1Q969X1 311 aa1.18□□□□□ -2.22
VPS50-213ENST00000477572 TESCQ96BS2 214 aa1.18□□□□□ -2.22
VPS50-213ENST00000477572 SMIM19Q96E16 107 aa1.18□□□□□ -2.22
VPS50-213ENST00000477572 SFRP2Q96HF1 295 aa1.18□□□□□ -2.22
VPS50-213ENST00000477572 ADTRPQ96IZ2 230 aa1.18□□□□□ -2.22
VPS50-213ENST00000477572 KCTD7Q96MP8 289 aa1.18□□□□□ -2.22
VPS50-213ENST00000477572 OR8B2Q96RD0 313 aa1.18□□□□□ -2.22
VPS50-213ENST00000477572 LINC01587Q99440 93 aa1.18□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms