RNA–Protein interactions for RNA: ENST00000477085.1

COL4A6-206, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,784 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-206ENST00000477085 K7EPK0 472 aa11.77□□□□□ -0.52
COL4A6-206ENST00000477085 FCGR3BO75015 233 aa11.77□□□□□ -0.52
COL4A6-206ENST00000477085 PITX3O75364 302 aa11.77□□□□□ -0.52
COL4A6-206ENST00000477085 LIPFP07098 398 aa11.77□□□□□ -0.52
COL4A6-206ENST00000477085 G6PCP35575 357 aa11.77□□□□□ -0.52
COL4A6-206ENST00000477085 ARF6P62330 175 aa11.77□□□□□ -0.52
COL4A6-206ENST00000477085 ESCO2Q56NI9 601 aa11.77□□□□□ -0.52
COL4A6-206ENST00000477085 ZNF787Q6DD87 383 aa11.77□□□□□ -0.52
COL4A6-206ENST00000477085 PRSS54Q6PEW0 395 aa11.77□□□□□ -0.52
COL4A6-206ENST00000477085 ZNF833PQ6ZTB9 187 aa11.77□□□□□ -0.52
COL4A6-206ENST00000477085 FAM71E2Q8N5Q1 922 aa11.77□□□□□ -0.52
COL4A6-206ENST00000477085 THAP6Q8TBB0 222 aa11.77□□□□□ -0.52
COL4A6-206ENST00000477085 C10orf105Q8TEF2 133 aa11.77□□□□□ -0.52
COL4A6-206ENST00000477085 LSM10Q969L4 123 aaKnown RBP11.77□□□□□ -0.52
COL4A6-206ENST00000477085 ST6GALNAC6Q969X2 333 aa11.77□□□□□ -0.52
COL4A6-206ENST00000477085 PERPQ96FX8 193 aa11.77□□□□□ -0.52
COL4A6-206ENST00000477085 PSMG3-AS1Q96PY0 264 aa11.77□□□□□ -0.52
COL4A6-206ENST00000477085 GON7Q9BXV9 100 aa11.77□□□□□ -0.52
COL4A6-206ENST00000477085 FAM212BQ9NTI7 297 aaPredicted RBP11.77□□□□□ -0.52
COL4A6-206ENST00000477085 ONECUT1Q9UBC0 465 aa11.77□□□□□ -0.52
COL4A6-206ENST00000477085 SVEP1Q4LDE5 3571 aa11.77□□□□□ -0.53
COL4A6-206ENST00000477085 ARHGAP32A7KAX9 2087 aa11.77□□□□□ -0.53
COL4A6-206ENST00000477085 IGHV2-26A0A0B4J1V2 119 aa11.77□□□□□ -0.53
COL4A6-206ENST00000477085 DEDDO75618 318 aa11.77□□□□□ -0.53
COL4A6-206ENST00000477085 SCGB1D2O95969 90 aa11.77□□□□□ -0.53
COL4A6-206ENST00000477085 KRASP01116 189 aa11.77□□□□□ -0.53
COL4A6-206ENST00000477085 RBP4P02753 201 aa11.77□□□□□ -0.53
COL4A6-206ENST00000477085 PAX1P15863 534 aa11.77□□□□□ -0.53
COL4A6-206ENST00000477085 S100A10P60903 97 aa11.77□□□□□ -0.53
COL4A6-206ENST00000477085 HIST2H2BCQ6DN03 193 aa11.77□□□□□ -0.53
COL4A6-206ENST00000477085 TCTEX1D1Q8N7M0 179 aa11.77□□□□□ -0.53
COL4A6-206ENST00000477085 OR9G1Q8NH87 305 aa11.77□□□□□ -0.53
COL4A6-206ENST00000477085 MFFQ9GZY8 342 aa11.77□□□□□ -0.53
COL4A6-206ENST00000477085 MMP26Q9NRE1 261 aa11.77□□□□□ -0.53
COL4A6-206ENST00000477085 MSGN1A6NI15 193 aa11.76□□□□□ -0.53
COL4A6-206ENST00000477085 NXPH3O95157 252 aa11.76□□□□□ -0.53
COL4A6-206ENST00000477085 IGLV1-47P01700 117 aa11.76□□□□□ -0.53
COL4A6-206ENST00000477085 EPHA1P21709 976 aa11.76□□□□□ -0.53
COL4A6-206ENST00000477085 AP2S1P53680 142 aaPredicted RBP11.76□□□□□ -0.53
COL4A6-206ENST00000477085 LCN2P80188 198 aa11.76□□□□□ -0.53
COL4A6-206ENST00000477085 TMUB2Q71RG4 321 aa11.76□□□□□ -0.53
COL4A6-206ENST00000477085 DMBX1Q8NFW5 382 aa11.76□□□□□ -0.53
COL4A6-206ENST00000477085 FAM168AQ92567 244 aa11.76□□□□□ -0.53
COL4A6-206ENST00000477085 RAB39BQ96DA2 213 aa11.76□□□□□ -0.53
COL4A6-206ENST00000477085 FAM210AQ96ND0 272 aa11.76□□□□□ -0.53
COL4A6-206ENST00000477085 C11orf1Q9H5F2 150 aa11.76□□□□□ -0.53
COL4A6-206ENST00000477085 LSM5Q9Y4Y9 91 aaKnown RBP11.76□□□□□ -0.53
COL4A6-206ENST00000477085 DOCK11Q5JSL3 2073 aa11.76□□□□□ -0.53
COL4A6-206ENST00000477085 SPG11Q96JI7 2443 aa11.76□□□□□ -0.53
COL4A6-206ENST00000477085 IGHV4-30-2A0A087WSY4 118 aa11.75□□□□□ -0.53
COL4A6-206ENST00000477085 IGHV4-61A0A0C4DH41 118 aa11.75□□□□□ -0.53
COL4A6-206ENST00000477085 A0A1B0GU03 582 aa11.75□□□□□ -0.53
COL4A6-206ENST00000477085 A0A1W2PPH5 198 aa11.75□□□□□ -0.53
COL4A6-206ENST00000477085 L7N2F9 121 aa11.75□□□□□ -0.53
COL4A6-206ENST00000477085 REG1BP48304 166 aa11.75□□□□□ -0.53
COL4A6-206ENST00000477085 ID3Q02535 119 aa11.75□□□□□ -0.53
COL4A6-206ENST00000477085 NDUFA5Q16718 116 aa11.75□□□□□ -0.53
COL4A6-206ENST00000477085 HCP5Q6MZN7 132 aa11.75□□□□□ -0.53
COL4A6-206ENST00000477085 DCUN1D4Q92564 292 aa11.75□□□□□ -0.53
COL4A6-206ENST00000477085 S1PR3Q99500 378 aa11.75□□□□□ -0.53
COL4A6-206ENST00000477085 MRPL20Q9BYC9 149 aaKnown RBP11.75□□□□□ -0.53
COL4A6-206ENST00000477085 CACNG5Q9UF02 275 aa11.75□□□□□ -0.53
COL4A6-206ENST00000477085 RCL1Q9Y2P8 373 aaKnown RBP11.75□□□□□ -0.53
COL4A6-206ENST00000477085 MMP24Q9Y5R2 645 aa11.75□□□□□ -0.53
COL4A6-206ENST00000477085 TSC22D2O75157 780 aa11.74□□□□□ -0.53
COL4A6-206ENST00000477085 SLC25A6P12236 298 aa11.74□□□□□ -0.53
COL4A6-206ENST00000477085 THBS3P49746 956 aa11.74□□□□□ -0.53
COL4A6-206ENST00000477085 ZNF137PP52743 207 aa11.74□□□□□ -0.53
COL4A6-206ENST00000477085 AKR1C2P52895 323 aa11.74□□□□□ -0.53
COL4A6-206ENST00000477085 POLR2GP62487 172 aaKnown RBP eCLIP11.74□□□□□ -0.53
COL4A6-206ENST00000477085 OPCMLQ14982 345 aa11.74□□□□□ -0.53
COL4A6-206ENST00000477085 MIDNQ504T8 468 aa11.74□□□□□ -0.53
COL4A6-206ENST00000477085 LDLRAD2Q5SZI1 272 aa11.74□□□□□ -0.53
COL4A6-206ENST00000477085 VKORC1L1Q8N0U8 176 aa11.74□□□□□ -0.53
COL4A6-206ENST00000477085 OR10X1Q8NGY0 326 aa11.74□□□□□ -0.53
COL4A6-206ENST00000477085 CD300LFQ8TDQ1 290 aa11.74□□□□□ -0.53
COL4A6-206ENST00000477085 GSX2Q9BZM3 304 aa11.74□□□□□ -0.53
COL4A6-206ENST00000477085 MAGT1Q9H0U3 335 aa11.74□□□□□ -0.53
COL4A6-206ENST00000477085 POMT1Q9Y6A1 747 aa11.74□□□□□ -0.53
COL4A6-206ENST00000477085 ARID1AO14497 2285 aa11.74□□□□□ -0.53
COL4A6-206ENST00000477085 HELZ2Q9BYK8 2649 aaKnown RBP11.74□□□□□ -0.53
COL4A6-206ENST00000477085 A8MXK9 166 aa11.74□□□□□ -0.53
COL4A6-206ENST00000477085 FAM157AC9JC47 383 aa11.74□□□□□ -0.53
COL4A6-206ENST00000477085 RBFOX2O43251 390 aaKnown RBP eCLIP11.74□□□□□ -0.53
COL4A6-206ENST00000477085 HPRT1P00492 218 aa11.74□□□□□ -0.53
COL4A6-206ENST00000477085 COX7A1P24310 79 aa11.74□□□□□ -0.53
COL4A6-206ENST00000477085 S100A11P31949 105 aa11.74□□□□□ -0.53
COL4A6-206ENST00000477085 SMCO1Q147U7 214 aa11.74□□□□□ -0.53
COL4A6-206ENST00000477085 ACOT7LQ6ZUV0 252 aa11.74□□□□□ -0.53
COL4A6-206ENST00000477085 KCNRGQ8N5I3 272 aa11.74□□□□□ -0.53
COL4A6-206ENST00000477085 TNFRSF14Q92956 283 aa11.74□□□□□ -0.53
COL4A6-206ENST00000477085 SPIN2AQ99865 258 aa11.74□□□□□ -0.53
COL4A6-206ENST00000477085 SPIN2BQ9BPZ2 258 aa11.74□□□□□ -0.53
COL4A6-206ENST00000477085 PIMREGQ9BSJ6 248 aa11.74□□□□□ -0.53
COL4A6-206ENST00000477085 CLEC7AQ9BXN2 247 aa11.74□□□□□ -0.53
COL4A6-206ENST00000477085 PLEKHA2Q9HB19 425 aa11.74□□□□□ -0.53
COL4A6-206ENST00000477085 BARX1Q9HBU1 254 aaPredicted RBP11.74□□□□□ -0.53
COL4A6-206ENST00000477085 SIRT7Q9NRC8 400 aa11.74□□□□□ -0.53
COL4A6-206ENST00000477085 M0R1W7 72 aa11.73□□□□□ -0.53
COL4A6-206ENST00000477085 ST8SIA3O43173 380 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms