RNA–Protein interactions for RNA: ENST00000475189.1

SRM-204, Transcript of spermidine synthase, humanhuman

TSL 2

Gene SRM, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-204ENST00000475189 CDK10Q15131 360 aa12.8□□□□□ -0.36
SRM-204ENST00000475189 TCTEX1D4Q5JR98 221 aa12.8□□□□□ -0.36
SRM-204ENST00000475189 PDPNQ86YL7 162 aa12.8□□□□□ -0.36
SRM-204ENST00000475189 CHPT1Q8WUD6 406 aa12.8□□□□□ -0.36
SRM-204ENST00000475189 CITED2Q99967 270 aaPredicted RBP12.8□□□□□ -0.36
SRM-204ENST00000475189 KIAA1456Q9P272 454 aa12.8□□□□□ -0.36
SRM-204ENST00000475189 EXTL2Q9UBQ6 330 aa12.8□□□□□ -0.36
SRM-204ENST00000475189 ADAM30Q9UKF2 790 aa12.8□□□□□ -0.36
SRM-204ENST00000475189 PSMB11A5LHX3 300 aa12.79□□□□□ -0.36
SRM-204ENST00000475189 LINC00473A8K010 186 aa12.79□□□□□ -0.36
SRM-204ENST00000475189 RRHO14718 337 aa12.79□□□□□ -0.36
SRM-204ENST00000475189 KCNAB3O43448 404 aa12.79□□□□□ -0.36
SRM-204ENST00000475189 SLC22A5O76082 557 aa12.79□□□□□ -0.36
SRM-204ENST00000475189 IGLV2-14P01704 120 aa12.79□□□□□ -0.36
SRM-204ENST00000475189 RPS16P62249 146 aaKnown RBP12.79□□□□□ -0.36
SRM-204ENST00000475189 CD83Q01151 205 aa12.79□□□□□ -0.36
SRM-204ENST00000475189 TAGLNQ01995 201 aaKnown RBP12.79□□□□□ -0.36
SRM-204ENST00000475189 LYSMD2Q8IV50 215 aa12.79□□□□□ -0.36
SRM-204ENST00000475189 FOXRED2Q8IWF2 684 aa12.79□□□□□ -0.36
SRM-204ENST00000475189 STPG2Q8N412 459 aa12.79□□□□□ -0.36
SRM-204ENST00000475189 GIMAP1Q8WWP7 306 aa12.79□□□□□ -0.36
SRM-204ENST00000475189 DDB2Q92466 427 aa12.79□□□□□ -0.36
SRM-204ENST00000475189 FBXL15Q9H469 300 aa12.79□□□□□ -0.36
SRM-204ENST00000475189 SCPEP1Q9HB40 452 aa12.79□□□□□ -0.36
SRM-204ENST00000475189 ZNF107Q9UII5 783 aaPredicted RBP12.79□□□□□ -0.36
SRM-204ENST00000475189 ADARB2-AS1A8MUL3 147 aa12.78□□□□□ -0.36
SRM-204ENST00000475189 AP4M1O00189 453 aa12.78□□□□□ -0.36
SRM-204ENST00000475189 SULT1C2O00338 296 aa12.78□□□□□ -0.36
SRM-204ENST00000475189 RGS5O15539 181 aa12.78□□□□□ -0.36
SRM-204ENST00000475189 TSPAN15O95858 294 aa12.78□□□□□ -0.36
SRM-204ENST00000475189 PPYP01298 95 aa12.78□□□□□ -0.36
SRM-204ENST00000475189 HLA-DRB1P01911 266 aa12.78□□□□□ -0.36
SRM-204ENST00000475189 PSG5Q15238 335 aa12.78□□□□□ -0.36
SRM-204ENST00000475189 C2orf68Q2NKX9 166 aa12.78□□□□□ -0.36
SRM-204ENST00000475189 LIN54Q6MZP7 749 aa12.78□□□□□ -0.36
SRM-204ENST00000475189 TREML4Q6UXN2 200 aa12.78□□□□□ -0.36
SRM-204ENST00000475189 OVCH2Q7RTZ1 564 aa12.78□□□□□ -0.36
SRM-204ENST00000475189 ZNF329Q86UD4 541 aa12.78□□□□□ -0.36
SRM-204ENST00000475189 LAX1Q8IWV1 398 aa12.78□□□□□ -0.36
SRM-204ENST00000475189 BVESQ8NE79 360 aa12.78□□□□□ -0.36
SRM-204ENST00000475189 FLYWCH2Q96CP2 140 aaKnown RBP12.78□□□□□ -0.36
SRM-204ENST00000475189 ADTRPQ96IZ2 230 aa12.78□□□□□ -0.36
SRM-204ENST00000475189 EHFQ9NZC4 300 aa12.78□□□□□ -0.36
SRM-204ENST00000475189 RBMX2Q9Y388 322 aaKnown RBP12.78□□□□□ -0.36
SRM-204ENST00000475189 IGHV7-81A0A0B4J1V7 117 aa12.77□□□□□ -0.37
SRM-204ENST00000475189 TPPPO94811 219 aa12.77□□□□□ -0.37
SRM-204ENST00000475189 PMP2P02689 132 aa12.77□□□□□ -0.37
SRM-204ENST00000475189 CSF1P09603 554 aa12.77□□□□□ -0.37
SRM-204ENST00000475189 RFX2P48378 723 aa12.77□□□□□ -0.37
SRM-204ENST00000475189 EIF4EBP1Q13541 118 aaPredicted RBP12.77□□□□□ -0.37
SRM-204ENST00000475189 DYRK1AQ13627 763 aa12.77□□□□□ -0.37
SRM-204ENST00000475189 NSUN5P1Q3KNT7 163 aa12.77□□□□□ -0.37
SRM-204ENST00000475189 TMEM177Q53S58 311 aa12.77□□□□□ -0.37
SRM-204ENST00000475189 DHRS11Q6UWP2 260 aa12.77□□□□□ -0.37
SRM-204ENST00000475189 NDUFA11Q86Y39 141 aa12.77□□□□□ -0.37
SRM-204ENST00000475189 OR4X2Q8NGF9 303 aa12.77□□□□□ -0.37
SRM-204ENST00000475189 SECTM1Q8WVN6 248 aa12.77□□□□□ -0.37
SRM-204ENST00000475189 TSNAXQ99598 290 aaKnown RBP12.77□□□□□ -0.37
SRM-204ENST00000475189 SLIRPQ9GZT3 109 aaKnown RBP12.77□□□□□ -0.37
SRM-204ENST00000475189 RBM38Q9H0Z9 239 aaKnown RBP12.77□□□□□ -0.37
SRM-204ENST00000475189 CCL28Q9NRJ3 127 aa12.77□□□□□ -0.37
SRM-204ENST00000475189 CCDC160A6NGH7 325 aa12.76□□□□□ -0.37
SRM-204ENST00000475189 FCN1O00602 326 aa12.76□□□□□ -0.37
SRM-204ENST00000475189 SPDEFO95238 335 aa12.76□□□□□ -0.37
SRM-204ENST00000475189 IGLV2-23P01705 113 aa12.76□□□□□ -0.37
SRM-204ENST00000475189 IGF1P05019 195 aa12.76□□□□□ -0.37
SRM-204ENST00000475189 RRASP10301 218 aa12.76□□□□□ -0.37
SRM-204ENST00000475189 HLA-DMAP28067 261 aa12.76□□□□□ -0.37
SRM-204ENST00000475189 LGALS7P47929 136 aa12.76□□□□□ -0.37
SRM-204ENST00000475189 TAS2R46P59540 309 aa12.76□□□□□ -0.37
SRM-204ENST00000475189 RPL30P62888 115 aaKnown RBP12.76□□□□□ -0.37
SRM-204ENST00000475189 PLGLAQ15195 96 aa12.76□□□□□ -0.37
SRM-204ENST00000475189 RTL8BQ17RB0 113 aa12.76□□□□□ -0.37
SRM-204ENST00000475189 ZNF660Q6AZW8 331 aaPredicted RBP12.76□□□□□ -0.37
SRM-204ENST00000475189 OR5H2Q8NGV7 314 aa12.76□□□□□ -0.37
SRM-204ENST00000475189 ABHD1Q96SE0 405 aa12.76□□□□□ -0.37
SRM-204ENST00000475189 OR51J1Q9H342 316 aa12.76□□□□□ -0.37
SRM-204ENST00000475189 METTL1Q9UBP6 276 aaKnown RBP12.76□□□□□ -0.37
SRM-204ENST00000475189 ZNF580Q9UK33 172 aa12.76□□□□□ -0.37
SRM-204ENST00000475189 TNCP24821 2201 aa12.76□□□□□ -0.37
SRM-204ENST00000475189 TCRBV4S1A1TA0A5B7 111 aa12.75□□□□□ -0.37
SRM-204ENST00000475189 RCVRNP35243 200 aa12.75□□□□□ -0.37
SRM-204ENST00000475189 HRH1P35367 487 aa12.75□□□□□ -0.37
SRM-204ENST00000475189 FXYD4P59646 89 aa12.75□□□□□ -0.37
SRM-204ENST00000475189 SLC35B1P78383 322 aa12.75□□□□□ -0.37
SRM-204ENST00000475189 CBX3Q13185 183 aa12.75□□□□□ -0.37
SRM-204ENST00000475189 MSMO1Q15800 293 aa12.75□□□□□ -0.37
SRM-204ENST00000475189 RNASE12Q5GAN4 147 aaKnown RBP12.75□□□□□ -0.37
SRM-204ENST00000475189 OR52I2Q8NH67 350 aa12.75□□□□□ -0.37
SRM-204ENST00000475189 FAM110DQ8TAY7 271 aaPredicted RBP12.75□□□□□ -0.37
SRM-204ENST00000475189 CLCC1Q96S66 551 aa12.75□□□□□ -0.37
SRM-204ENST00000475189 ZNF2Q9BSG1 426 aaPredicted RBP12.75□□□□□ -0.37
SRM-204ENST00000475189 GON7Q9BXV9 100 aa12.75□□□□□ -0.37
SRM-204ENST00000475189 SLC5A7Q9GZV3 580 aa12.75□□□□□ -0.37
SRM-204ENST00000475189 NXF2Q9GZY0 626 aaKnown RBP12.75□□□□□ -0.37
SRM-204ENST00000475189 MMP27Q9H306 513 aa12.75□□□□□ -0.37
SRM-204ENST00000475189 TSSC4Q9Y5U2 329 aaPredicted RBP12.75□□□□□ -0.37
SRM-204ENST00000475189 A0A1W2PRX2 142 aa12.74□□□□□ -0.37
SRM-204ENST00000475189 SRRM4A7MD48 611 aaKnown RBP12.74□□□□□ -0.37
SRM-204ENST00000475189 SHOXO15266 292 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 111.3 ms