RNA–Protein interactions for RNA: ENST00000473533.6

HERC4-209, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best)

Gene HERC4, Length 3,593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-209ENST00000473533 C1orf174Q8IYL3 243 aa5.16□□□□□ -1.58
HERC4-209ENST00000473533 OR10G8Q8NGN5 311 aa5.16□□□□□ -1.58
HERC4-209ENST00000473533 OR52E5Q8NH55 327 aa5.16□□□□□ -1.58
HERC4-209ENST00000473533 PPP1R35Q8TAP8 253 aa5.16□□□□□ -1.58
HERC4-209ENST00000473533 ZCCHC14Q8WYQ9 949 aaKnown RBP5.16□□□□□ -1.58
HERC4-209ENST00000473533 SFRP2Q96HF1 295 aa5.16□□□□□ -1.58
HERC4-209ENST00000473533 C20orf144Q9BQM9 153 aa5.16□□□□□ -1.58
HERC4-209ENST00000473533 ZNF703Q9H7S9 590 aaPredicted RBP5.16□□□□□ -1.58
HERC4-209ENST00000473533 ODAMA1E959 279 aa5.16□□□□□ -1.58
HERC4-209ENST00000473533 SIRPB1O00241 398 aa5.16□□□□□ -1.58
HERC4-209ENST00000473533 NTN3O00634 580 aaPredicted RBP5.16□□□□□ -1.58
HERC4-209ENST00000473533 TNFSF15O95150 251 aa5.16□□□□□ -1.58
HERC4-209ENST00000473533 ESDP10768 282 aa5.16□□□□□ -1.58
HERC4-209ENST00000473533 IL3RAP26951 378 aa5.16□□□□□ -1.58
HERC4-209ENST00000473533 CD1BP29016 333 aa5.16□□□□□ -1.58
HERC4-209ENST00000473533 OTX2P32243 289 aa5.16□□□□□ -1.58
HERC4-209ENST00000473533 NTF4P34130 210 aa5.16□□□□□ -1.58
HERC4-209ENST00000473533 SELENOTP62341 195 aa5.16□□□□□ -1.58
HERC4-209ENST00000473533 GAGE1Q13065 139 aa5.16□□□□□ -1.58
HERC4-209ENST00000473533 P2RY6Q15077 328 aa5.16□□□□□ -1.58
HERC4-209ENST00000473533 OR1C1Q15619 314 aa5.16□□□□□ -1.58
HERC4-209ENST00000473533 HLA-BQ31612 363 aa5.16□□□□□ -1.58
HERC4-209ENST00000473533 CST9LP1Q5W188 147 aa5.16□□□□□ -1.58
HERC4-209ENST00000473533 SSX7Q7RTT5 188 aa5.16□□□□□ -1.58
HERC4-209ENST00000473533 LINC01551Q86U37 167 aa5.16□□□□□ -1.58
HERC4-209ENST00000473533 ZDHHC11Q9H8X9 412 aa5.16□□□□□ -1.58
HERC4-209ENST00000473533 CBY1Q9Y3M2 126 aa5.16□□□□□ -1.58
HERC4-209ENST00000473533 DNAJC13O75165 2243 aa5.16□□□□□ -1.58
HERC4-209ENST00000473533 SPINT2O43291 252 aa5.16□□□□□ -1.58
HERC4-209ENST00000473533 JMJD7P0C870 316 aa5.16□□□□□ -1.58
HERC4-209ENST00000473533 P0C879 139 aa5.16□□□□□ -1.58
HERC4-209ENST00000473533 ERVK11-1P61568 191 aa5.16□□□□□ -1.58
HERC4-209ENST00000473533 C6orf15Q6UXA7 325 aaPredicted RBP5.16□□□□□ -1.58
HERC4-209ENST00000473533 BATF2Q8N1L9 274 aa5.16□□□□□ -1.58
HERC4-209ENST00000473533 PRR7Q8TB68 274 aa5.16□□□□□ -1.58
HERC4-209ENST00000473533 TMEM68Q96MH6 324 aa5.16□□□□□ -1.58
HERC4-209ENST00000473533 SFXN3Q9BWM7 321 aa5.16□□□□□ -1.58
HERC4-209ENST00000473533 FGF23Q9GZV9 251 aaPredicted RBP5.16□□□□□ -1.58
HERC4-209ENST00000473533 OR2D2Q9H210 308 aa5.16□□□□□ -1.58
HERC4-209ENST00000473533 SHANK1Q9Y566 2161 aa5.16□□□□□ -1.58
HERC4-209ENST00000473533 A0A096LPE4 126 aa5.15□□□□□ -1.58
HERC4-209ENST00000473533 A0A1W2PPZ6 126 aa5.15□□□□□ -1.58
HERC4-209ENST00000473533 C9JCJ5 164 aa5.15□□□□□ -1.58
HERC4-209ENST00000473533 IFNL4K9M1U5 179 aa5.15□□□□□ -1.58
HERC4-209ENST00000473533 RBFOX2O43251 390 aaKnown RBP eCLIP5.15□□□□□ -1.582e-8■■□□□ 14.4
HERC4-209ENST00000473533 HAND1O96004 215 aa5.15□□□□□ -1.58
HERC4-209ENST00000473533 GZMHP20718 246 aa5.15□□□□□ -1.58
HERC4-209ENST00000473533 ATP5IP56385 69 aaPredicted RBP5.15□□□□□ -1.58
HERC4-209ENST00000473533 RPL15P61313 204 aaKnown RBP5.15□□□□□ -1.58
HERC4-209ENST00000473533 RHOBP62745 196 aa5.15□□□□□ -1.58
HERC4-209ENST00000473533 CACNA1DQ01668 2161 aa5.15□□□□□ -1.58
HERC4-209ENST00000473533 DCAF10Q5QP82 559 aa5.15□□□□□ -1.58
HERC4-209ENST00000473533 C20orf204Q6ZNR8 217 aa5.15□□□□□ -1.58
HERC4-209ENST00000473533 PPP1R32Q7Z5V6 425 aa5.15□□□□□ -1.58
HERC4-209ENST00000473533 PRR18Q8N4B5 295 aa5.15□□□□□ -1.58
HERC4-209ENST00000473533 OR2M7Q8NG81 312 aa5.15□□□□□ -1.58
HERC4-209ENST00000473533 OR4B1Q8NGF8 309 aa5.15□□□□□ -1.58
HERC4-209ENST00000473533 HLA-CQ95604 372 aa5.15□□□□□ -1.58
HERC4-209ENST00000473533 GPHA2Q96T91 129 aa5.15□□□□□ -1.58
HERC4-209ENST00000473533 ZNF586Q9NXT0 402 aa5.15□□□□□ -1.58
HERC4-209ENST00000473533 TPRP12270 2363 aaKnown RBP5.15□□□□□ -1.58
HERC4-209ENST00000473533 FNDC10F2Z333 226 aa5.15□□□□□ -1.59
HERC4-209ENST00000473533 TNFSF13O75888 250 aa5.15□□□□□ -1.59
HERC4-209ENST00000473533 MMP23AO75900 390 aa5.15□□□□□ -1.59
HERC4-209ENST00000473533 HPRT1P00492 218 aa5.15□□□□□ -1.59
HERC4-209ENST00000473533 IGLV2-14P01704 120 aa5.15□□□□□ -1.59
HERC4-209ENST00000473533 LINC00614P0C842 121 aa5.15□□□□□ -1.59
HERC4-209ENST00000473533 SELLP14151 372 aa5.15□□□□□ -1.59
HERC4-209ENST00000473533 CRISP2P16562 243 aa5.15□□□□□ -1.59
HERC4-209ENST00000473533 MDKP21741 143 aaPredicted RBP5.15□□□□□ -1.59
HERC4-209ENST00000473533 CA6P23280 308 aa5.15□□□□□ -1.59
HERC4-209ENST00000473533 CHRNA7P36544 502 aa5.15□□□□□ -1.59
HERC4-209ENST00000473533 LHX2P50458 406 aa5.15□□□□□ -1.59
HERC4-209ENST00000473533 ZNF90Q03938 601 aa5.15□□□□□ -1.59
HERC4-209ENST00000473533 AARDQ4LEZ3 155 aa5.15□□□□□ -1.59
HERC4-209ENST00000473533 TUSC5Q8IXB3 177 aa5.15□□□□□ -1.59
HERC4-209ENST00000473533 GCNT2Q8N0V5 402 aa5.15□□□□□ -1.59
HERC4-209ENST00000473533 OR1K1Q8NGR3 316 aa5.15□□□□□ -1.59
HERC4-209ENST00000473533 OR4A16Q8NH70 328 aa5.15□□□□□ -1.59
HERC4-209ENST00000473533 SGMS2Q8NHU3 365 aa5.15□□□□□ -1.59
HERC4-209ENST00000473533 MIEN1Q9BRT3 115 aa5.15□□□□□ -1.59
HERC4-209ENST00000473533 OR51B6Q9H340 312 aa5.15□□□□□ -1.59
HERC4-209ENST00000473533 IL36BQ9NZH7 164 aa5.15□□□□□ -1.59
HERC4-209ENST00000473533 IL36RNQ9UBH0 155 aa5.15□□□□□ -1.59
HERC4-209ENST00000473533 KLF13Q9Y2Y9 288 aaPredicted RBP5.15□□□□□ -1.59
HERC4-209ENST00000473533 MUC3AQ02505 3323 aa5.15□□□□□ -1.59
HERC4-209ENST00000473533 A0A1B0GWJ7 208 aa5.15□□□□□ -1.59
HERC4-209ENST00000473533 LNP1A1A4G5 178 aa5.15□□□□□ -1.59
HERC4-209ENST00000473533 PMS2P5A8MQ11 134 aa5.15□□□□□ -1.59
HERC4-209ENST00000473533 IGKV1D-33P01593 117 aa5.15□□□□□ -1.59
HERC4-209ENST00000473533 IGKV1-33P01594 117 aa5.15□□□□□ -1.59
HERC4-209ENST00000473533 CLDN18P56856 261 aa5.15□□□□□ -1.59
HERC4-209ENST00000473533 RPEL1Q2QD12 228 aa5.15□□□□□ -1.59
HERC4-209ENST00000473533 ZNF468Q5VIY5 522 aaPredicted RBP5.15□□□□□ -1.59
HERC4-209ENST00000473533 SCCPDHQ8NBX0 429 aa5.15□□□□□ -1.59
HERC4-209ENST00000473533 VAMP8Q9BV40 100 aa5.15□□□□□ -1.59
HERC4-209ENST00000473533 ENY2Q9NPA8 101 aa5.15□□□□□ -1.59
HERC4-209ENST00000473533 TMEM167BQ9NRX6 74 aa5.15□□□□□ -1.59
HERC4-209ENST00000473533 TMEM106BQ9NUM4 274 aa5.15□□□□□ -1.59
HERC4-209ENST00000473533 ELOVL5Q9NYP7 299 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms