RNA–Protein interactions for RNA: ENST00000472959.5

TOP3A-204, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 913 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-204ENST00000472959 VAX1Q5SQQ9 334 aa16.54■□□□□ 0.24
TOP3A-204ENST00000472959 ZNF660Q6AZW8 331 aaPredicted RBP16.54■□□□□ 0.24
TOP3A-204ENST00000472959 RBMX2Q9Y388 322 aaKnown RBP16.54■□□□□ 0.24
TOP3A-204ENST00000472959 A6NHS1 94 aa16.53■□□□□ 0.24
TOP3A-204ENST00000472959 GSTZ1O43708 216 aaPredicted RBP16.53■□□□□ 0.24
TOP3A-204ENST00000472959 DUTP33316 252 aaKnown RBP16.53■□□□□ 0.24
TOP3A-204ENST00000472959 PROK1P58294 105 aa16.53■□□□□ 0.24
TOP3A-204ENST00000472959 PDPNQ86YL7 162 aa16.53■□□□□ 0.24
TOP3A-204ENST00000472959 TMEM229BQ8NBD8 167 aa16.53■□□□□ 0.24
TOP3A-204ENST00000472959 ZBTB34Q8NCN2 500 aa16.53■□□□□ 0.24
TOP3A-204ENST00000472959 SECTM1Q8WVN6 248 aa16.53■□□□□ 0.24
TOP3A-204ENST00000472959 BORCS5Q969J3 196 aa16.53■□□□□ 0.24
TOP3A-204ENST00000472959 ZNF2Q9BSG1 426 aaPredicted RBP16.53■□□□□ 0.24
TOP3A-204ENST00000472959 ZNF747Q9BV97 191 aa16.53■□□□□ 0.24
TOP3A-204ENST00000472959 SLC5A7Q9GZV3 580 aa16.53■□□□□ 0.24
TOP3A-204ENST00000472959 LIN7CQ9NUP9 197 aaKnown RBP16.53■□□□□ 0.24
TOP3A-204ENST00000472959 SIGLEC9Q9Y336 463 aa16.53■□□□□ 0.24
TOP3A-204ENST00000472959 IGLV2-14P01704 120 aa16.52■□□□□ 0.24
TOP3A-204ENST00000472959 RRASP10301 218 aa16.52■□□□□ 0.24
TOP3A-204ENST00000472959 PTBP1P26599 531 aaKnown RBP eCLIP16.52■□□□□ 0.24
TOP3A-204ENST00000472959 F2RL1P55085 397 aa16.52■□□□□ 0.24
TOP3A-204ENST00000472959 LINC00205P59089 165 aa16.52■□□□□ 0.24
TOP3A-204ENST00000472959 TAS2R19P59542 299 aa16.52■□□□□ 0.24
TOP3A-204ENST00000472959 FXYD4P59646 89 aa16.52■□□□□ 0.24
TOP3A-204ENST00000472959 TSPAN5P62079 268 aa16.52■□□□□ 0.24
TOP3A-204ENST00000472959 MMDQ15546 238 aa16.52■□□□□ 0.24
TOP3A-204ENST00000472959 RTL8BQ17RB0 113 aa16.52■□□□□ 0.24
TOP3A-204ENST00000472959 ARSJQ5FYB0 599 aaPredicted RBP16.52■□□□□ 0.24
TOP3A-204ENST00000472959 RNASE10Q5GAN6 216 aaKnown RBP16.52■□□□□ 0.24
TOP3A-204ENST00000472959 Q6ZS46 218 aa16.52■□□□□ 0.24
TOP3A-204ENST00000472959 CCDC190Q86UF4 302 aa16.52■□□□□ 0.24
TOP3A-204ENST00000472959 Q8N9W7 124 aa16.52■□□□□ 0.24
TOP3A-204ENST00000472959 NPBQ8NG41 125 aa16.52■□□□□ 0.24
TOP3A-204ENST00000472959 MOB3AQ96BX8 217 aa16.52■□□□□ 0.24
TOP3A-204ENST00000472959 RITA1Q96K30 269 aa16.52■□□□□ 0.24
TOP3A-204ENST00000472959 HSD17B10Q99714 261 aaKnown RBP16.52■□□□□ 0.24
TOP3A-204ENST00000472959 RASL11BQ9BPW5 248 aa16.52■□□□□ 0.24
TOP3A-204ENST00000472959 SLC35D1Q9NTN3 355 aa16.52■□□□□ 0.24
TOP3A-204ENST00000472959 TAS2R8Q9NYW2 309 aa16.52■□□□□ 0.24
TOP3A-204ENST00000472959 STAB1Q9NY15 2570 aa16.51■□□□□ 0.23
TOP3A-204ENST00000472959 NBR2O15453 112 aa16.51■□□□□ 0.23
TOP3A-204ENST00000472959 IFNA6P05013 189 aa16.51■□□□□ 0.23
TOP3A-204ENST00000472959 CBX3Q13185 183 aa16.51■□□□□ 0.23
TOP3A-204ENST00000472959 ZNF66Q6ZN08 573 aa16.51■□□□□ 0.23
TOP3A-204ENST00000472959 FAM71E2Q8N5Q1 922 aa16.51■□□□□ 0.23
TOP3A-204ENST00000472959 OR6Q1Q8NGQ2 317 aa16.51■□□□□ 0.23
TOP3A-204ENST00000472959 WFDC12Q8WWY7 111 aa16.51■□□□□ 0.23
TOP3A-204ENST00000472959 FLYWCH2Q96CP2 140 aaKnown RBP16.51■□□□□ 0.23
TOP3A-204ENST00000472959 CCL28Q9NRJ3 127 aa16.51■□□□□ 0.23
TOP3A-204ENST00000472959 SERTAD4Q9NUC0 356 aa16.51■□□□□ 0.23
TOP3A-204ENST00000472959 HAX1O00165 279 aa16.5■□□□□ 0.23
TOP3A-204ENST00000472959 CD74P04233 296 aa16.5■□□□□ 0.23
TOP3A-204ENST00000472959 CD3DP04234 171 aa16.5■□□□□ 0.23
TOP3A-204ENST00000472959 CSF1P09603 554 aa16.5■□□□□ 0.23
TOP3A-204ENST00000472959 ETV6P41212 452 aa16.5■□□□□ 0.23
TOP3A-204ENST00000472959 VDAC2P45880 294 aaPredicted RBP16.5■□□□□ 0.23
TOP3A-204ENST00000472959 C9orf152Q5JTZ5 239 aa16.5■□□□□ 0.23
TOP3A-204ENST00000472959 SPANXN2Q5MJ10 180 aa16.5■□□□□ 0.23
TOP3A-204ENST00000472959 TMEM17Q86X19 198 aa16.5■□□□□ 0.23
TOP3A-204ENST00000472959 ARRDC1Q8N5I2 433 aa16.5■□□□□ 0.23
TOP3A-204ENST00000472959 DDB2Q92466 427 aa16.5■□□□□ 0.23
TOP3A-204ENST00000472959 RBMXL1Q96E39 390 aaKnown RBP16.5■□□□□ 0.23
TOP3A-204ENST00000472959 TSNAXQ99598 290 aaKnown RBP16.5■□□□□ 0.23
TOP3A-204ENST00000472959 BATF3Q9NR55 127 aa16.5■□□□□ 0.23
TOP3A-204ENST00000472959 KIAA1456Q9P272 454 aa16.5■□□□□ 0.23
TOP3A-204ENST00000472959 PRELID3BQ9Y3B1 194 aa16.5■□□□□ 0.23
TOP3A-204ENST00000472959 V9GYH0 126 aa16.5■□□□□ 0.23
TOP3A-204ENST00000472959 LINC00473A8K010 186 aa16.49■□□□□ 0.23
TOP3A-204ENST00000472959 M0QYG6 137 aa16.49■□□□□ 0.23
TOP3A-204ENST00000472959 PEX14O75381 377 aa16.49■□□□□ 0.23
TOP3A-204ENST00000472959 IGKV1-16P04430 117 aa16.49■□□□□ 0.23
TOP3A-204ENST00000472959 RPS16P62249 146 aaKnown RBP16.49■□□□□ 0.23
TOP3A-204ENST00000472959 EIF4EBP1Q13541 118 aaPredicted RBP16.49■□□□□ 0.23
TOP3A-204ENST00000472959 SHISA2Q6UWI4 295 aa16.49■□□□□ 0.23
TOP3A-204ENST00000472959 KCTD9Q7L273 389 aa16.49■□□□□ 0.23
TOP3A-204ENST00000472959 DNHD1Q96M86 4753 aa16.48■□□□□ 0.23
TOP3A-204ENST00000472959 SH2D7A6NKC9 451 aaPredicted RBP16.48■□□□□ 0.23
TOP3A-204ENST00000472959 NDUFA3O95167 84 aa16.48■□□□□ 0.23
TOP3A-204ENST00000472959 RAB3DO95716 219 aa16.48■□□□□ 0.23
TOP3A-204ENST00000472959 IGHG2P01859 326 aa16.48■□□□□ 0.23
TOP3A-204ENST00000472959 LGALS7P47929 136 aa16.48■□□□□ 0.23
TOP3A-204ENST00000472959 MEF2DQ14814 521 aa16.48■□□□□ 0.23
TOP3A-204ENST00000472959 C5orf64Q2M2E5 130 aa16.48■□□□□ 0.23
TOP3A-204ENST00000472959 PYDC2Q56P42 97 aa16.48■□□□□ 0.23
TOP3A-204ENST00000472959 STEAP1BQ6NZ63 245 aa16.48■□□□□ 0.23
TOP3A-204ENST00000472959 LPCAT3Q6P1A2 487 aa16.48■□□□□ 0.23
TOP3A-204ENST00000472959 BVESQ8NE79 360 aa16.48■□□□□ 0.23
TOP3A-204ENST00000472959 TINAGL1Q9GZM7 467 aaPredicted RBP16.48■□□□□ 0.23
TOP3A-204ENST00000472959 RRHO14718 337 aa16.47■□□□□ 0.23
TOP3A-204ENST00000472959 SPDEFO95238 335 aa16.47■□□□□ 0.23
TOP3A-204ENST00000472959 CNTFRP26992 372 aa16.47■□□□□ 0.23
TOP3A-204ENST00000472959 GNRHRP30968 328 aa16.47■□□□□ 0.23
TOP3A-204ENST00000472959 TMEM177Q53S58 311 aa16.47■□□□□ 0.23
TOP3A-204ENST00000472959 ZNF818PQ6ZRF7 136 aa16.47■□□□□ 0.23
TOP3A-204ENST00000472959 SLC35E3Q7Z769 313 aa16.47■□□□□ 0.23
TOP3A-204ENST00000472959 MFSD4AQ8N468 514 aa16.47■□□□□ 0.23
TOP3A-204ENST00000472959 THAP7Q9BT49 309 aaPredicted RBP16.47■□□□□ 0.23
TOP3A-204ENST00000472959 WNT10AQ9GZT5 417 aa16.47■□□□□ 0.23
TOP3A-204ENST00000472959 KCNAB3O43448 404 aa16.46■□□□□ 0.23
TOP3A-204ENST00000472959 KIR2DS2P43631 304 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms