RNA–Protein interactions for RNA: ENST00000472815.5

HIF3A-206, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 1,709 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-206ENST00000472815 NSG2Q9Y328 171 aa11.99□□□□□ -0.49
HIF3A-206ENST00000472815 MMP24Q9Y5R2 645 aa11.99□□□□□ -0.49
HIF3A-206ENST00000472815 POMT1Q9Y6A1 747 aa11.99□□□□□ -0.49
HIF3A-206ENST00000472815 PTPN13Q12923 2485 aa11.98□□□□□ -0.49
HIF3A-206ENST00000472815 LOC105371242A0A075B767 164 aa11.98□□□□□ -0.49
HIF3A-206ENST00000472815 A0A1W2PPE3 182 aa11.98□□□□□ -0.49
HIF3A-206ENST00000472815 LINC00473A8K010 186 aa11.98□□□□□ -0.49
HIF3A-206ENST00000472815 J3QR06 171 aa11.98□□□□□ -0.49
HIF3A-206ENST00000472815 MBPP02686 304 aaPredicted RBP11.98□□□□□ -0.49
HIF3A-206ENST00000472815 AP2S1P53680 142 aaPredicted RBP11.98□□□□□ -0.49
HIF3A-206ENST00000472815 PRRX1P54821 245 aa11.98□□□□□ -0.49
HIF3A-206ENST00000472815 ERVFRD-1P60508 538 aa11.98□□□□□ -0.49
HIF3A-206ENST00000472815 ZNF816Q0VGE8 651 aaPredicted RBP11.98□□□□□ -0.49
HIF3A-206ENST00000472815 RPL39P5Q59GN2 51 aa11.98□□□□□ -0.49
HIF3A-206ENST00000472815 OR2B11Q5JQS5 317 aa11.98□□□□□ -0.49
HIF3A-206ENST00000472815 KCNRGQ8N5I3 272 aa11.98□□□□□ -0.49
HIF3A-206ENST00000472815 LY6G5BQ8NDX9 201 aa11.98□□□□□ -0.49
HIF3A-206ENST00000472815 ZNF596Q8TC21 504 aa11.98□□□□□ -0.49
HIF3A-206ENST00000472815 PIMREGQ9BSJ6 248 aa11.98□□□□□ -0.49
HIF3A-206ENST00000472815 RNF126Q9BV68 326 aa11.98□□□□□ -0.49
HIF3A-206ENST00000472815 NARFLQ9H6Q4 476 aa11.98□□□□□ -0.49
HIF3A-206ENST00000472815 COA4Q9NYJ1 87 aa11.98□□□□□ -0.49
HIF3A-206ENST00000472815 DCHS2Q6V1P9 2916 aa11.98□□□□□ -0.49
HIF3A-206ENST00000472815 MALRD1Q5VYJ5 2156 aa11.98□□□□□ -0.49
HIF3A-206ENST00000472815 K7EPK0 472 aa11.97□□□□□ -0.49
HIF3A-206ENST00000472815 M0R1W7 72 aa11.97□□□□□ -0.49
HIF3A-206ENST00000472815 RAMP3O60896 148 aa11.97□□□□□ -0.49
HIF3A-206ENST00000472815 FCGR3BO75015 233 aa11.97□□□□□ -0.49
HIF3A-206ENST00000472815 IGKV1-39P01597 117 aa11.97□□□□□ -0.49
HIF3A-206ENST00000472815 IGKV1D-39P04432 117 aa11.97□□□□□ -0.49
HIF3A-206ENST00000472815 EPHA1P21709 976 aa11.97□□□□□ -0.49
HIF3A-206ENST00000472815 ARHGDIBP52566 201 aa11.97□□□□□ -0.49
HIF3A-206ENST00000472815 ERVK-16P61578 105 aa11.97□□□□□ -0.49
HIF3A-206ENST00000472815 RTL8BQ17RB0 113 aa11.97□□□□□ -0.49
HIF3A-206ENST00000472815 ZNF767PQ75MW2 155 aa11.97□□□□□ -0.49
HIF3A-206ENST00000472815 ABHD12Q8N2K0 398 aa11.97□□□□□ -0.49
HIF3A-206ENST00000472815 FAM71E2Q8N5Q1 922 aa11.97□□□□□ -0.49
HIF3A-206ENST00000472815 ZNF525Q8N782 197 aa11.97□□□□□ -0.49
HIF3A-206ENST00000472815 AIFM2Q9BRQ8 373 aa11.97□□□□□ -0.49
HIF3A-206ENST00000472815 ZC4H2Q9NQZ6 224 aa11.97□□□□□ -0.49
HIF3A-206ENST00000472815 ONECUT1Q9UBC0 465 aa11.97□□□□□ -0.49
HIF3A-206ENST00000472815 CACFD1Q9UGQ2 172 aa11.97□□□□□ -0.49
HIF3A-206ENST00000472815 IGHV4-39P01824 125 aa11.97□□□□□ -0.49
HIF3A-206ENST00000472815 RRASP10301 218 aa11.97□□□□□ -0.49
HIF3A-206ENST00000472815 NCR3LG1Q68D85 454 aa11.97□□□□□ -0.49
HIF3A-206ENST00000472815 DHRS7BQ6IAN0 325 aaPredicted RBP11.97□□□□□ -0.49
HIF3A-206ENST00000472815 CLEC2AQ6UVW9 174 aa11.97□□□□□ -0.49
HIF3A-206ENST00000472815 H2BFWTQ7Z2G1 175 aa11.97□□□□□ -0.49
HIF3A-206ENST00000472815 ODF3L1Q8IXM7 274 aa11.97□□□□□ -0.49
HIF3A-206ENST00000472815 GPR146Q96CH1 333 aa11.97□□□□□ -0.49
HIF3A-206ENST00000472815 AQP10Q96PS8 301 aa11.97□□□□□ -0.49
HIF3A-206ENST00000472815 CLEC7AQ9BXN2 247 aa11.97□□□□□ -0.49
HIF3A-206ENST00000472815 OR5AC2Q9NZP5 309 aa11.97□□□□□ -0.49
HIF3A-206ENST00000472815 AMMECR1Q9Y4X0 333 aaPredicted RBP11.97□□□□□ -0.49
HIF3A-206ENST00000472815 FAM90A9PA6NNJ1 464 aa11.96□□□□□ -0.49
HIF3A-206ENST00000472815 FAM90A26D6RGX4 464 aa11.96□□□□□ -0.49
HIF3A-206ENST00000472815 H0YIZ8 118 aa11.96□□□□□ -0.49
HIF3A-206ENST00000472815 ENSAO43768 121 aaKnown RBP11.96□□□□□ -0.49
HIF3A-206ENST00000472815 S1PR2O95136 353 aa11.96□□□□□ -0.49
HIF3A-206ENST00000472815 KRASP01116 189 aa11.96□□□□□ -0.49
HIF3A-206ENST00000472815 IFNA7P01567 189 aa11.96□□□□□ -0.49
HIF3A-206ENST00000472815 IGHV2-5P01817 119 aa11.96□□□□□ -0.49
HIF3A-206ENST00000472815 APOA2P02652 100 aa11.96□□□□□ -0.49
HIF3A-206ENST00000472815 MMP9P14780 707 aa11.96□□□□□ -0.49
HIF3A-206ENST00000472815 ATP5J2P56134 94 aa11.96□□□□□ -0.49
HIF3A-206ENST00000472815 VAMP2P63027 116 aa11.96□□□□□ -0.49
HIF3A-206ENST00000472815 IFITM2Q01629 132 aa11.96□□□□□ -0.49
HIF3A-206ENST00000472815 ZNF833PQ6ZTB9 187 aa11.96□□□□□ -0.49
HIF3A-206ENST00000472815 SLC51BQ86UW2 128 aa11.96□□□□□ -0.49
HIF3A-206ENST00000472815 OR8H1Q8NGG4 311 aa11.96□□□□□ -0.49
HIF3A-206ENST00000472815 OR13D1Q8NGV5 346 aa11.96□□□□□ -0.49
HIF3A-206ENST00000472815 FAM168AQ92567 244 aa11.96□□□□□ -0.49
HIF3A-206ENST00000472815 ZNF251Q9BRH9 671 aa11.96□□□□□ -0.49
HIF3A-206ENST00000472815 CACNG5Q9UF02 275 aa11.96□□□□□ -0.49
HIF3A-206ENST00000472815 RNF222A6NCQ9 220 aa11.95□□□□□ -0.5
HIF3A-206ENST00000472815 MARCH11A6NNE9 402 aa11.95□□□□□ -0.5
HIF3A-206ENST00000472815 BCL2L11O43521 198 aa11.95□□□□□ -0.5
HIF3A-206ENST00000472815 PROP1O75360 226 aa11.95□□□□□ -0.5
HIF3A-206ENST00000472815 MED6O75586 246 aa11.95□□□□□ -0.5
HIF3A-206ENST00000472815 IGKV1-5P01602 117 aa11.95□□□□□ -0.5
HIF3A-206ENST00000472815 NQO2P16083 231 aa11.95□□□□□ -0.5
HIF3A-206ENST00000472815 G6PCP35575 357 aa11.95□□□□□ -0.5
HIF3A-206ENST00000472815 P2RY1P47900 373 aa11.95□□□□□ -0.5
HIF3A-206ENST00000472815 ID3Q02535 119 aa11.95□□□□□ -0.5
HIF3A-206ENST00000472815 GPR157Q5UAW9 335 aa11.95□□□□□ -0.5
HIF3A-206ENST00000472815 C1orf122Q6ZSJ8 110 aa11.95□□□□□ -0.5
HIF3A-206ENST00000472815 KIR3DL3Q8N743 410 aa11.95□□□□□ -0.5
HIF3A-206ENST00000472815 DDB2Q92466 427 aa11.95□□□□□ -0.5
HIF3A-206ENST00000472815 R3HDM4Q96D70 268 aa11.95□□□□□ -0.5
HIF3A-206ENST00000472815 ARPC5LQ9BPX5 153 aa11.95□□□□□ -0.5
HIF3A-206ENST00000472815 BPESC1Q9GZL8 116 aa11.95□□□□□ -0.5
HIF3A-206ENST00000472815 IGHV2-26A0A0B4J1V2 119 aa11.94□□□□□ -0.5
HIF3A-206ENST00000472815 TAAR5O14804 337 aa11.94□□□□□ -0.5
HIF3A-206ENST00000472815 PITX3O75364 302 aa11.94□□□□□ -0.5
HIF3A-206ENST00000472815 HRASP01112 189 aa11.94□□□□□ -0.5
HIF3A-206ENST00000472815 COL8A1P27658 744 aa11.94□□□□□ -0.5
HIF3A-206ENST00000472815 ZNF137PP52743 207 aa11.94□□□□□ -0.5
HIF3A-206ENST00000472815 DSCR9P59020 149 aa11.94□□□□□ -0.5
HIF3A-206ENST00000472815 TEX261Q6UWH6 196 aa11.94□□□□□ -0.5
HIF3A-206ENST00000472815 C11orf42Q8N5U0 333 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms