RNA–Protein interactions for RNA: ENST00000471567.1

SDC3-203, Transcript of syndecan 3, humanhuman

TSL 3

Gene SDC3, Length 589 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3-203ENST00000471567 FOXRED2Q8IWF2 684 aa12.1□□□□□ -0.47
SDC3-203ENST00000471567 LAX1Q8IWV1 398 aa12.1□□□□□ -0.47
SDC3-203ENST00000471567 OR5H2Q8NGV7 314 aa12.1□□□□□ -0.47
SDC3-203ENST00000471567 RBMXL1Q96E39 390 aaKnown RBP12.1□□□□□ -0.47
SDC3-203ENST00000471567 NXF2Q9GZY0 626 aaKnown RBP12.1□□□□□ -0.47
SDC3-203ENST00000471567 SLC35D1Q9NTN3 355 aa12.1□□□□□ -0.47
SDC3-203ENST00000471567 FBXO24O75426 580 aa12.09□□□□□ -0.47
SDC3-203ENST00000471567 PPYP01298 95 aa12.09□□□□□ -0.47
SDC3-203ENST00000471567 AADACP22760 399 aa12.09□□□□□ -0.47
SDC3-203ENST00000471567 CNTFRP26992 372 aa12.09□□□□□ -0.47
SDC3-203ENST00000471567 LINC00205P59089 165 aa12.09□□□□□ -0.47
SDC3-203ENST00000471567 CBX3Q13185 183 aa12.09□□□□□ -0.47
SDC3-203ENST00000471567 DYRK1AQ13627 763 aa12.09□□□□□ -0.47
SDC3-203ENST00000471567 C5orf64Q2M2E5 130 aa12.09□□□□□ -0.47
SDC3-203ENST00000471567 ZBTB34Q8NCN2 500 aa12.09□□□□□ -0.47
SDC3-203ENST00000471567 CHPT1Q8WUD6 406 aa12.09□□□□□ -0.47
SDC3-203ENST00000471567 FLYWCH2Q96CP2 140 aaKnown RBP12.09□□□□□ -0.47
SDC3-203ENST00000471567 ABHD1Q96SE0 405 aa12.09□□□□□ -0.47
SDC3-203ENST00000471567 TSNAXQ99598 290 aaKnown RBP12.09□□□□□ -0.47
SDC3-203ENST00000471567 EHFQ9NZC4 300 aa12.09□□□□□ -0.47
SDC3-203ENST00000471567 RBMX2Q9Y388 322 aaKnown RBP12.09□□□□□ -0.47
SDC3-203ENST00000471567 M0QZ24 198 aa12.08□□□□□ -0.48
SDC3-203ENST00000471567 AP4M1O00189 453 aa12.08□□□□□ -0.48
SDC3-203ENST00000471567 RRHO14718 337 aa12.08□□□□□ -0.48
SDC3-203ENST00000471567 SPDEFO95238 335 aa12.08□□□□□ -0.48
SDC3-203ENST00000471567 IGLV2-14P01704 120 aa12.08□□□□□ -0.48
SDC3-203ENST00000471567 HLA-DRB1P01911 266 aa12.08□□□□□ -0.48
SDC3-203ENST00000471567 PMP2P02689 132 aa12.08□□□□□ -0.48
SDC3-203ENST00000471567 IGKV1-16P04430 117 aa12.08□□□□□ -0.48
SDC3-203ENST00000471567 LGALS7P47929 136 aa12.08□□□□□ -0.48
SDC3-203ENST00000471567 RFX2P48378 723 aa12.08□□□□□ -0.48
SDC3-203ENST00000471567 RPS16P62249 146 aaKnown RBP12.08□□□□□ -0.48
SDC3-203ENST00000471567 MRPS10P82664 201 aaKnown RBP12.08□□□□□ -0.48
SDC3-203ENST00000471567 RTL8BQ17RB0 113 aa12.08□□□□□ -0.48
SDC3-203ENST00000471567 PRR31Q5SQ13 230 aa12.08□□□□□ -0.48
SDC3-203ENST00000471567 ZNF660Q6AZW8 331 aaPredicted RBP12.08□□□□□ -0.48
SDC3-203ENST00000471567 LIN54Q6MZP7 749 aa12.08□□□□□ -0.48
SDC3-203ENST00000471567 OR5AU1Q8NGC0 362 aa12.08□□□□□ -0.48
SDC3-203ENST00000471567 MCFD2Q8NI22 146 aa12.08□□□□□ -0.48
SDC3-203ENST00000471567 DDB2Q92466 427 aa12.08□□□□□ -0.48
SDC3-203ENST00000471567 DIRAS2Q96HU8 199 aa12.08□□□□□ -0.48
SDC3-203ENST00000471567 HSD17B10Q99714 261 aaKnown RBP12.08□□□□□ -0.48
SDC3-203ENST00000471567 C6orf62Q9GZU0 229 aaPredicted RBP12.08□□□□□ -0.48
SDC3-203ENST00000471567 ZNF107Q9UII5 783 aaPredicted RBP12.08□□□□□ -0.48
SDC3-203ENST00000471567 ZNF580Q9UK33 172 aa12.08□□□□□ -0.48
SDC3-203ENST00000471567 HLA-DMAP28067 261 aa12.07□□□□□ -0.48
SDC3-203ENST00000471567 HRH1P35367 487 aa12.07□□□□□ -0.48
SDC3-203ENST00000471567 TMEM177Q53S58 311 aa12.07□□□□□ -0.48
SDC3-203ENST00000471567 ACTBL2Q562R1 376 aa12.07□□□□□ -0.48
SDC3-203ENST00000471567 PYHIN1Q6K0P9 492 aa12.07□□□□□ -0.48
SDC3-203ENST00000471567 ZNF66Q6ZN08 573 aa12.07□□□□□ -0.48
SDC3-203ENST00000471567 STPG2Q8N412 459 aa12.07□□□□□ -0.48
SDC3-203ENST00000471567 BVESQ8NE79 360 aa12.07□□□□□ -0.48
SDC3-203ENST00000471567 OR52I2Q8NH67 350 aa12.07□□□□□ -0.48
SDC3-203ENST00000471567 SECTM1Q8WVN6 248 aa12.07□□□□□ -0.48
SDC3-203ENST00000471567 FCAMRQ8WWV6 532 aa12.07□□□□□ -0.48
SDC3-203ENST00000471567 BORCS5Q969J3 196 aa12.07□□□□□ -0.48
SDC3-203ENST00000471567 GON7Q9BXV9 100 aa12.07□□□□□ -0.48
SDC3-203ENST00000471567 NDUFA13Q9P0J0 144 aa12.07□□□□□ -0.48
SDC3-203ENST00000471567 MTFP1Q9UDX5 166 aa12.07□□□□□ -0.48
SDC3-203ENST00000471567 PRELID3BQ9Y3B1 194 aa12.07□□□□□ -0.48
SDC3-203ENST00000471567 A3GALT2U3KPV4 340 aa12.07□□□□□ -0.48
SDC3-203ENST00000471567 PSMB11A5LHX3 300 aa12.06□□□□□ -0.48
SDC3-203ENST00000471567 LINC01548A6NM66 108 aa12.06□□□□□ -0.48
SDC3-203ENST00000471567 LINC00473A8K010 186 aa12.06□□□□□ -0.48
SDC3-203ENST00000471567 GABARAPH6UMI1 98 aa12.06□□□□□ -0.48
SDC3-203ENST00000471567 CTDSPLO15194 276 aa12.06□□□□□ -0.48
SDC3-203ENST00000471567 IGF1P05019 195 aa12.06□□□□□ -0.48
SDC3-203ENST00000471567 CD28P10747 220 aa12.06□□□□□ -0.48
SDC3-203ENST00000471567 HERV-K104P61576 105 aa12.06□□□□□ -0.48
SDC3-203ENST00000471567 SLC35B1P78383 322 aa12.06□□□□□ -0.48
SDC3-203ENST00000471567 CD83Q01151 205 aa12.06□□□□□ -0.48
SDC3-203ENST00000471567 SSBP1Q04837 148 aaKnown RBP12.06□□□□□ -0.48
SDC3-203ENST00000471567 EIF4EBP1Q13541 118 aaPredicted RBP12.06□□□□□ -0.48
SDC3-203ENST00000471567 PSG5Q15238 335 aa12.06□□□□□ -0.48
SDC3-203ENST00000471567 COMMD1Q8N668 190 aa12.06□□□□□ -0.48
SDC3-203ENST00000471567 C11orf44Q8N8P7 122 aa12.06□□□□□ -0.48
SDC3-203ENST00000471567 OR4X2Q8NGF9 303 aa12.06□□□□□ -0.48
SDC3-203ENST00000471567 OR6F1Q8NGZ6 308 aa12.06□□□□□ -0.48
SDC3-203ENST00000471567 MOB3AQ96BX8 217 aa12.06□□□□□ -0.48
SDC3-203ENST00000471567 NOL4LQ96MY1 436 aaPredicted RBP12.06□□□□□ -0.48
SDC3-203ENST00000471567 HSPB9Q9BQS6 159 aa12.06□□□□□ -0.48
SDC3-203ENST00000471567 ZNF2Q9BSG1 426 aaPredicted RBP12.06□□□□□ -0.48
SDC3-203ENST00000471567 SLC5A7Q9GZV3 580 aa12.06□□□□□ -0.48
SDC3-203ENST00000471567 MMP27Q9H306 513 aa12.06□□□□□ -0.48
SDC3-203ENST00000471567 FBXL15Q9H469 300 aa12.06□□□□□ -0.48
SDC3-203ENST00000471567 CCL28Q9NRJ3 127 aa12.06□□□□□ -0.48
SDC3-203ENST00000471567 KLK11Q9UBX7 282 aa12.06□□□□□ -0.48
SDC3-203ENST00000471567 IGHV7-81A0A0B4J1V7 117 aa12.05□□□□□ -0.48
SDC3-203ENST00000471567 TBPP20226 339 aa12.05□□□□□ -0.48
SDC3-203ENST00000471567 TNFSF8P32971 234 aa12.05□□□□□ -0.48
SDC3-203ENST00000471567 FXYD4P59646 89 aa12.05□□□□□ -0.48
SDC3-203ENST00000471567 PLGLAQ15195 96 aa12.05□□□□□ -0.48
SDC3-203ENST00000471567 C2orf68Q2NKX9 166 aa12.05□□□□□ -0.48
SDC3-203ENST00000471567 VAX1Q5SQQ9 334 aa12.05□□□□□ -0.48
SDC3-203ENST00000471567 KCTD9Q7L273 389 aa12.05□□□□□ -0.48
SDC3-203ENST00000471567 NDUFA11Q86Y39 141 aa12.05□□□□□ -0.48
SDC3-203ENST00000471567 MFSD4AQ8N468 514 aa12.05□□□□□ -0.48
SDC3-203ENST00000471567 OSR1Q8TAX0 266 aaPredicted RBP12.05□□□□□ -0.48
SDC3-203ENST00000471567 DGCR14Q96DF8 476 aaKnown RBP12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms