RNA–Protein interactions for RNA: ENST00000471344.1

COL1A1-203, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 1,192 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-203ENST00000471344 SMIM18P0DKX4 95 aa11.89□□□□□ -0.51
COL1A1-203ENST00000471344 GALP22466 123 aa11.89□□□□□ -0.51
COL1A1-203ENST00000471344 MYL9P24844 172 aa11.89□□□□□ -0.51
COL1A1-203ENST00000471344 MC5RP33032 325 aa11.89□□□□□ -0.51
COL1A1-203ENST00000471344 ECI1P42126 302 aa11.89□□□□□ -0.51
COL1A1-203ENST00000471344 SLURP1P55000 103 aa11.89□□□□□ -0.51
COL1A1-203ENST00000471344 SSBP2P81877 361 aaPredicted RBP11.89□□□□□ -0.51
COL1A1-203ENST00000471344 RUNX1Q01196 453 aa11.89□□□□□ -0.51
COL1A1-203ENST00000471344 ZNF616Q08AN1 781 aa11.89□□□□□ -0.51
COL1A1-203ENST00000471344 VAX1Q5SQQ9 334 aa11.89□□□□□ -0.51
COL1A1-203ENST00000471344 ZNF660Q6AZW8 331 aaPredicted RBP11.89□□□□□ -0.51
COL1A1-203ENST00000471344 TSPAN14Q8NG11 270 aa11.89□□□□□ -0.51
COL1A1-203ENST00000471344 OR4A4PQ8NGN8 299 aa11.89□□□□□ -0.51
COL1A1-203ENST00000471344 OR10R2Q8NGX6 335 aa11.89□□□□□ -0.51
COL1A1-203ENST00000471344 CABLES2Q9BTV7 478 aa11.89□□□□□ -0.51
COL1A1-203ENST00000471344 OR2D2Q9H210 308 aa11.89□□□□□ -0.51
COL1A1-203ENST00000471344 ZNF221Q9UK13 617 aa11.89□□□□□ -0.51
COL1A1-203ENST00000471344 NUBP2Q9Y5Y2 271 aa11.89□□□□□ -0.51
COL1A1-203ENST00000471344 NBEAL2Q6ZNJ1 2754 aa11.89□□□□□ -0.51
COL1A1-203ENST00000471344 TRIM64CA6NLI5 447 aa11.88□□□□□ -0.51
COL1A1-203ENST00000471344 ARPC1BO15143 372 aaKnown RBP11.88□□□□□ -0.51
COL1A1-203ENST00000471344 SLC25A17O43808 307 aa11.88□□□□□ -0.51
COL1A1-203ENST00000471344 RBBP9O75884 186 aa11.88□□□□□ -0.51
COL1A1-203ENST00000471344 IGHV3-11P01762 117 aa11.88□□□□□ -0.51
COL1A1-203ENST00000471344 TFAP2AP05549 437 aa11.88□□□□□ -0.51
COL1A1-203ENST00000471344 OR8U9P0C7N5 309 aa11.88□□□□□ -0.51
COL1A1-203ENST00000471344 HIST1H1DP16402 221 aaKnown RBP11.88□□□□□ -0.51
COL1A1-203ENST00000471344 RAB3BP20337 219 aa11.88□□□□□ -0.51
COL1A1-203ENST00000471344 GADD45AP24522 165 aa11.88□□□□□ -0.51
COL1A1-203ENST00000471344 TGFBR1P36897 503 aa11.88□□□□□ -0.51
COL1A1-203ENST00000471344 RPS16P62249 146 aaKnown RBP11.88□□□□□ -0.51
COL1A1-203ENST00000471344 PJVKQ0ZLH3 352 aa11.88□□□□□ -0.51
COL1A1-203ENST00000471344 PPP1R27Q86WC6 154 aa11.88□□□□□ -0.51
COL1A1-203ENST00000471344 LFNGQ8NES3 379 aa11.88□□□□□ -0.51
COL1A1-203ENST00000471344 DCUN1D4Q92564 292 aa11.88□□□□□ -0.51
COL1A1-203ENST00000471344 MS4A10Q96PG2 267 aa11.88□□□□□ -0.51
COL1A1-203ENST00000471344 TXNL4BQ9NX01 149 aaKnown RBP11.88□□□□□ -0.51
COL1A1-203ENST00000471344 SDHAF2Q9NX18 166 aa11.88□□□□□ -0.51
COL1A1-203ENST00000471344 TENM3Q9P273 2699 aa11.87□□□□□ -0.51
COL1A1-203ENST00000471344 IGHV4OR15-8A0A075B7B6 117 aa11.87□□□□□ -0.51
COL1A1-203ENST00000471344 A0A087WW49 117 aa11.87□□□□□ -0.51
COL1A1-203ENST00000471344 TRBV6-7A0A0A0MS04 114 aa11.87□□□□□ -0.51
COL1A1-203ENST00000471344 TNFAIP8O95379 198 aa11.87□□□□□ -0.51
COL1A1-203ENST00000471344 IGLV2-23P01705 113 aa11.87□□□□□ -0.51
COL1A1-203ENST00000471344 OR8U8P0C7N1 319 aa11.87□□□□□ -0.51
COL1A1-203ENST00000471344 UNQ5815/PRO19632Q6UWF5 114 aa11.87□□□□□ -0.51
COL1A1-203ENST00000471344 GRPEL2Q8TAA5 225 aa11.87□□□□□ -0.51
COL1A1-203ENST00000471344 DLX4Q92988 240 aaPredicted RBP11.87□□□□□ -0.51
COL1A1-203ENST00000471344 TOLLIPQ9H0E2 274 aa11.87□□□□□ -0.51
COL1A1-203ENST00000471344 SLC35D1Q9NTN3 355 aa11.87□□□□□ -0.51
COL1A1-203ENST00000471344 STUB1Q9UNE7 303 aa11.87□□□□□ -0.51
COL1A1-203ENST00000471344 LSM4Q9Y4Z0 139 aaKnown RBP11.87□□□□□ -0.51
COL1A1-203ENST00000471344 RAMP3O60896 148 aa11.86□□□□□ -0.51
COL1A1-203ENST00000471344 APOA2P02652 100 aa11.86□□□□□ -0.51
COL1A1-203ENST00000471344 LGALS1P09382 135 aaKnown RBP11.86□□□□□ -0.51
COL1A1-203ENST00000471344 CLEC2LP0C7M8 214 aa11.86□□□□□ -0.51
COL1A1-203ENST00000471344 CD36P16671 472 aa11.86□□□□□ -0.51
COL1A1-203ENST00000471344 RAB6AP20340 208 aa11.86□□□□□ -0.51
COL1A1-203ENST00000471344 MRPS15P82914 257 aaKnown RBP11.86□□□□□ -0.51
COL1A1-203ENST00000471344 DEFA5Q01523 94 aa11.86□□□□□ -0.51
COL1A1-203ENST00000471344 ACTBL2Q562R1 376 aa11.86□□□□□ -0.51
COL1A1-203ENST00000471344 PDPNQ86YL7 162 aa11.86□□□□□ -0.51
COL1A1-203ENST00000471344 OR10J5Q8NHC4 309 aa11.86□□□□□ -0.51
COL1A1-203ENST00000471344 ARPC1AQ92747 370 aa11.86□□□□□ -0.51
COL1A1-203ENST00000471344 TSNAXQ99598 290 aaKnown RBP11.86□□□□□ -0.51
COL1A1-203ENST00000471344 RNF5Q99942 180 aa11.86□□□□□ -0.51
COL1A1-203ENST00000471344 CENPOQ9BU64 300 aa11.86□□□□□ -0.51
COL1A1-203ENST00000471344 ATG5Q9H1Y0 275 aa11.86□□□□□ -0.51
COL1A1-203ENST00000471344 A0A087WXM4 84 aa11.85□□□□□ -0.51
COL1A1-203ENST00000471344 SRRM4A7MD48 611 aaKnown RBP11.85□□□□□ -0.51
COL1A1-203ENST00000471344 SPDEFO95238 335 aa11.85□□□□□ -0.51
COL1A1-203ENST00000471344 SERPINB10P48595 397 aa11.85□□□□□ -0.51
COL1A1-203ENST00000471344 TPPP2P59282 170 aa11.85□□□□□ -0.51
COL1A1-203ENST00000471344 ZNF562Q6V9R5 426 aa11.85□□□□□ -0.51
COL1A1-203ENST00000471344 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.85□□□□□ -0.51
COL1A1-203ENST00000471344 FLYWCH2Q96CP2 140 aaKnown RBP11.85□□□□□ -0.51
COL1A1-203ENST00000471344 YIPF6Q96EC8 236 aa11.85□□□□□ -0.51
COL1A1-203ENST00000471344 LOC100506127A0A0U1RQW1 187 aa11.84□□□□□ -0.51
COL1A1-203ENST00000471344 LINC01619G3V211 115 aa11.84□□□□□ -0.51
COL1A1-203ENST00000471344 J3QRK9 145 aa11.84□□□□□ -0.51
COL1A1-203ENST00000471344 OVOL1O14753 267 aa11.84□□□□□ -0.51
COL1A1-203ENST00000471344 DIRAS3O95661 229 aa11.84□□□□□ -0.51
COL1A1-203ENST00000471344 LY86O95711 162 aa11.84□□□□□ -0.51
COL1A1-203ENST00000471344 CRYGBP07316 175 aa11.84□□□□□ -0.51
COL1A1-203ENST00000471344 FGF9P31371 208 aaPredicted RBP11.84□□□□□ -0.51
COL1A1-203ENST00000471344 ARFRP1Q13795 201 aa11.84□□□□□ -0.51
COL1A1-203ENST00000471344 FXYD3Q14802 87 aa11.84□□□□□ -0.51
COL1A1-203ENST00000471344 MRGPRG-AS1Q2M3A8 158 aa11.84□□□□□ -0.51
COL1A1-203ENST00000471344 AKIRIN2Q53H80 203 aa11.84□□□□□ -0.51
COL1A1-203ENST00000471344 HAPLN4Q86UW8 402 aa11.84□□□□□ -0.51
COL1A1-203ENST00000471344 TCTEX1D1Q8N7M0 179 aa11.84□□□□□ -0.51
COL1A1-203ENST00000471344 BVESQ8NE79 360 aa11.84□□□□□ -0.51
COL1A1-203ENST00000471344 HARBI1Q96MB7 349 aa11.84□□□□□ -0.51
COL1A1-203ENST00000471344 ASCL2Q99929 193 aa11.84□□□□□ -0.51
COL1A1-203ENST00000471344 ZNF256Q9Y2P7 627 aaPredicted RBP11.84□□□□□ -0.51
COL1A1-203ENST00000471344 RYR3Q15413 4870 aa11.83□□□□□ -0.52
COL1A1-203ENST00000471344 METTL21EPA6NDL7 271 aa11.83□□□□□ -0.52
COL1A1-203ENST00000471344 LINC00473A8K010 186 aa11.83□□□□□ -0.52
COL1A1-203ENST00000471344 SAP30O75446 220 aa11.83□□□□□ -0.52
COL1A1-203ENST00000471344 APELAP0DMC3 54 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms