RNA–Protein interactions for RNA: ENST00000468211.6

PTCH1-210, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 1,254 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-210ENST00000468211 CCDC90BQ9GZT6 254 aa18.84■□□□□ 0.61
PTCH1-210ENST00000468211 M0R1X1 148 aa18.83■□□□□ 0.6
PTCH1-210ENST00000468211 DENRO43583 198 aaKnown RBP18.83■□□□□ 0.6
PTCH1-210ENST00000468211 HSPB1P04792 205 aaKnown RBP18.83■□□□□ 0.6
PTCH1-210ENST00000468211 TFAP2AP05549 437 aa18.83■□□□□ 0.6
PTCH1-210ENST00000468211 CRHBPP24387 322 aa18.83■□□□□ 0.6
PTCH1-210ENST00000468211 IGSF11Q5DX21 431 aa18.83■□□□□ 0.6
PTCH1-210ENST00000468211 GRPEL2Q8TAA5 225 aa18.83■□□□□ 0.6
PTCH1-210ENST00000468211 C5orf30Q96GV9 206 aa18.83■□□□□ 0.6
PTCH1-210ENST00000468211 V9GY05 133 aa18.83■□□□□ 0.6
PTCH1-210ENST00000468211 SPDEFO95238 335 aa18.82■□□□□ 0.6
PTCH1-210ENST00000468211 IGLV2-23P01705 113 aa18.82■□□□□ 0.6
PTCH1-210ENST00000468211 GP9P14770 177 aa18.82■□□□□ 0.6
PTCH1-210ENST00000468211 PSMA1P25786 263 aaKnown RBP18.82■□□□□ 0.6
PTCH1-210ENST00000468211 PJVKQ0ZLH3 352 aa18.82■□□□□ 0.6
PTCH1-210ENST00000468211 FXYD3Q14802 87 aa18.82■□□□□ 0.6
PTCH1-210ENST00000468211 HAPLN4Q86UW8 402 aa18.82■□□□□ 0.6
PTCH1-210ENST00000468211 PDPNQ86YL7 162 aa18.82■□□□□ 0.6
PTCH1-210ENST00000468211 SHISA3A0PJX4 238 aa18.81■□□□□ 0.6
PTCH1-210ENST00000468211 TRIM64CA6NLI5 447 aa18.81■□□□□ 0.6
PTCH1-210ENST00000468211 APOA2P02652 100 aa18.81■□□□□ 0.6
PTCH1-210ENST00000468211 TRGV3P03979 118 aa18.81■□□□□ 0.6
PTCH1-210ENST00000468211 OR10A3P58181 314 aa18.81■□□□□ 0.6
PTCH1-210ENST00000468211 PRSS48Q7RTY5 328 aa18.81■□□□□ 0.6
PTCH1-210ENST00000468211 OR4A4PQ8NGN8 299 aa18.81■□□□□ 0.6
PTCH1-210ENST00000468211 FLYWCH2Q96CP2 140 aaKnown RBP18.81■□□□□ 0.6
PTCH1-210ENST00000468211 SLC35D1Q9NTN3 355 aa18.81■□□□□ 0.6
PTCH1-210ENST00000468211 FABP7O15540 132 aa18.8■□□□□ 0.6
PTCH1-210ENST00000468211 CRYGBP07316 175 aa18.8■□□□□ 0.6
PTCH1-210ENST00000468211 OR8U9P0C7N5 309 aa18.8■□□□□ 0.6
PTCH1-210ENST00000468211 GSTT2P0CG29 244 aa18.8■□□□□ 0.6
PTCH1-210ENST00000468211 GSTT2BP0CG30 244 aa18.8■□□□□ 0.6
PTCH1-210ENST00000468211 SSX1Q16384 188 aa18.8■□□□□ 0.6
PTCH1-210ENST00000468211 OR5T1Q8NG75 326 aa18.8■□□□□ 0.6
PTCH1-210ENST00000468211 MAFIPQ8WZ33 124 aa18.8■□□□□ 0.6
PTCH1-210ENST00000468211 OR2D2Q9H210 308 aa18.8■□□□□ 0.6
PTCH1-210ENST00000468211 SLA2Q9H6Q3 261 aa18.8■□□□□ 0.6
PTCH1-210ENST00000468211 RAB22AQ9UL26 194 aa18.8■□□□□ 0.6
PTCH1-210ENST00000468211 TNCP24821 2201 aa18.8■□□□□ 0.6
PTCH1-210ENST00000468211 BET1O15155 118 aa18.79■□□□□ 0.6
PTCH1-210ENST00000468211 FCGR3AP08637 254 aa18.79■□□□□ 0.6
PTCH1-210ENST00000468211 FRMD6-AS1P0C7T7 363 aa18.79■□□□□ 0.6
PTCH1-210ENST00000468211 PITPNAQ00169 270 aa18.79■□□□□ 0.6
PTCH1-210ENST00000468211 ZNF436-AS1Q8NC38 126 aaPredicted RBP18.79■□□□□ 0.6
PTCH1-210ENST00000468211 OR6Q1Q8NGQ2 317 aa18.79■□□□□ 0.6
PTCH1-210ENST00000468211 RAB3CQ96E17 227 aa18.79■□□□□ 0.6
PTCH1-210ENST00000468211 CABLES2Q9BTV7 478 aa18.79■□□□□ 0.6
PTCH1-210ENST00000468211 ACOT13Q9NPJ3 140 aa18.79■□□□□ 0.6
PTCH1-210ENST00000468211 SDHAF2Q9NX18 166 aa18.79■□□□□ 0.6
PTCH1-210ENST00000468211 ZNF230Q9UIE0 474 aaPredicted RBP18.79■□□□□ 0.6
PTCH1-210ENST00000468211 DEFA5Q01523 94 aa18.78■□□□□ 0.6
PTCH1-210ENST00000468211 POC5Q8NA72 575 aa18.78■□□□□ 0.6
PTCH1-210ENST00000468211 RCHY1Q96PM5 261 aa18.78■□□□□ 0.6
PTCH1-210ENST00000468211 ZNF355PQ9NSJ1 428 aa18.78■□□□□ 0.6
PTCH1-210ENST00000468211 TRBV6-7A0A0A0MS04 114 aa18.77■□□□□ 0.6
PTCH1-210ENST00000468211 A0A0B4J203 849 aa18.77■□□□□ 0.6
PTCH1-210ENST00000468211 SRRM4A7MD48 611 aaKnown RBP18.77■□□□□ 0.6
PTCH1-210ENST00000468211 MFNGO00587 321 aa18.77■□□□□ 0.6
PTCH1-210ENST00000468211 GNB3P16520 340 aa18.77■□□□□ 0.6
PTCH1-210ENST00000468211 CD40LGP29965 261 aa18.77■□□□□ 0.6
PTCH1-210ENST00000468211 SERPINB10P48595 397 aa18.77■□□□□ 0.6
PTCH1-210ENST00000468211 MRGPRG-AS1Q2M3A8 158 aa18.77■□□□□ 0.6
PTCH1-210ENST00000468211 OR4C12Q96R67 309 aa18.77■□□□□ 0.6
PTCH1-210ENST00000468211 A0A075B6Q4 140 aa18.76■□□□□ 0.59
PTCH1-210ENST00000468211 RAB27BO00194 218 aa18.76■□□□□ 0.59
PTCH1-210ENST00000468211 CNIH1O95406 144 aa18.76■□□□□ 0.59
PTCH1-210ENST00000468211 SRSF7Q16629 238 aaKnown RBP eCLIP18.76■□□□□ 0.59
PTCH1-210ENST00000468211 BVESQ8NE79 360 aa18.76■□□□□ 0.59
PTCH1-210ENST00000468211 OR10R2Q8NGX6 335 aa18.76■□□□□ 0.59
PTCH1-210ENST00000468211 ANKRD34BA5PLL1 514 aa18.75■□□□□ 0.59
PTCH1-210ENST00000468211 C3orf84H3BNL1 204 aa18.75■□□□□ 0.59
PTCH1-210ENST00000468211 LGALS7P47929 136 aa18.75■□□□□ 0.59
PTCH1-210ENST00000468211 PSMD7P51665 324 aa18.75■□□□□ 0.59
PTCH1-210ENST00000468211 MRPS15P82914 257 aaKnown RBP18.75■□□□□ 0.59
PTCH1-210ENST00000468211 TBCEQ15813 527 aaPredicted RBP18.75■□□□□ 0.59
PTCH1-210ENST00000468211 OR10J5Q8NHC4 309 aa18.75■□□□□ 0.59
PTCH1-210ENST00000468211 HARBI1Q96MB7 349 aa18.75■□□□□ 0.59
PTCH1-210ENST00000468211 ELF5Q9UKW6 265 aaPredicted RBP18.75■□□□□ 0.59
PTCH1-210ENST00000468211 IGKV1D-8A0A087WSZ0 117 aa18.74■□□□□ 0.59
PTCH1-210ENST00000468211 TRAV1-2A0A0B4J238 106 aa18.74■□□□□ 0.59
PTCH1-210ENST00000468211 IFITM5A6NNB3 132 aa18.74■□□□□ 0.59
PTCH1-210ENST00000468211 IGLV1-51P01701 117 aa18.74■□□□□ 0.59
PTCH1-210ENST00000468211 HIST1H1DP16402 221 aaKnown RBP18.74■□□□□ 0.59
PTCH1-210ENST00000468211 TMEM177Q53S58 311 aa18.74■□□□□ 0.59
PTCH1-210ENST00000468211 Q8N1Y9 231 aa18.74■□□□□ 0.59
PTCH1-210ENST00000468211 RANGRFQ9HD47 186 aaPredicted RBP18.74■□□□□ 0.59
PTCH1-210ENST00000468211 C13orf42A0A1B0GVH6 325 aa18.73■□□□□ 0.59
PTCH1-210ENST00000468211 H3BUA1 57 aa18.73■□□□□ 0.59
PTCH1-210ENST00000468211 RBMXL2O75526 392 aaKnown RBP18.73■□□□□ 0.59
PTCH1-210ENST00000468211 APELAP0DMC3 54 aa18.73■□□□□ 0.59
PTCH1-210ENST00000468211 ZNF367Q7RTV3 350 aa18.73■□□□□ 0.59
PTCH1-210ENST00000468211 NR2C2APQ86WQ0 139 aa18.73■□□□□ 0.59
PTCH1-210ENST00000468211 RSRP1Q9BUV0 290 aa18.73■□□□□ 0.59
PTCH1-210ENST00000468211 ADAM30Q9UKF2 790 aa18.73■□□□□ 0.59
PTCH1-210ENST00000468211 DYNC2H1Q8NCM8 4307 aaKnown RBP18.73■□□□□ 0.59
PTCH1-210ENST00000468211 PDCD5O14737 125 aa18.72■□□□□ 0.59
PTCH1-210ENST00000468211 SHOXO15266 292 aa18.72■□□□□ 0.59
PTCH1-210ENST00000468211 IL34Q6ZMJ4 242 aa18.72■□□□□ 0.59
PTCH1-210ENST00000468211 MUC7Q8TAX7 377 aa18.72■□□□□ 0.59
PTCH1-210ENST00000468211 DDB2Q92466 427 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms