RNA–Protein interactions for RNA: ENST00000466285.1

COL6A1-203, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 500 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-203ENST00000466285 FXYD3Q14802 87 aa15.74■□□□□ 0.11
COL6A1-203ENST00000466285 PYHIN1Q6K0P9 492 aa15.74■□□□□ 0.11
COL6A1-203ENST00000466285 ZNF562Q6V9R5 426 aa15.74■□□□□ 0.11
COL6A1-203ENST00000466285 IL34Q6ZMJ4 242 aa15.74■□□□□ 0.11
COL6A1-203ENST00000466285 MS4A15Q8N5U1 240 aa15.74■□□□□ 0.11
COL6A1-203ENST00000466285 PTX4Q96A99 478 aa15.74■□□□□ 0.11
COL6A1-203ENST00000466285 OR4C12Q96R67 309 aa15.74■□□□□ 0.11
COL6A1-203ENST00000466285 EDA2RQ9HAV5 297 aa15.74■□□□□ 0.11
COL6A1-203ENST00000466285 C12orf4Q9NQ89 552 aa15.74■□□□□ 0.11
COL6A1-203ENST00000466285 RDH8Q9NYR8 311 aa15.74■□□□□ 0.11
COL6A1-203ENST00000466285 M0R1X1 148 aa15.73■□□□□ 0.11
COL6A1-203ENST00000466285 SLC17A2O00624 439 aa15.73■□□□□ 0.11
COL6A1-203ENST00000466285 HSPA12AO43301 675 aa15.73■□□□□ 0.11
COL6A1-203ENST00000466285 CRYGBP07316 175 aa15.73■□□□□ 0.11
COL6A1-203ENST00000466285 RPS16P62249 146 aaKnown RBP15.73■□□□□ 0.11
COL6A1-203ENST00000466285 MED22Q15528 200 aa15.73■□□□□ 0.11
COL6A1-203ENST00000466285 MOGAT2Q3SYC2 334 aa15.73■□□□□ 0.11
COL6A1-203ENST00000466285 RNLSQ5VYX0 342 aa15.73■□□□□ 0.11
COL6A1-203ENST00000466285 POC5Q8NA72 575 aa15.73■□□□□ 0.11
COL6A1-203ENST00000466285 MAFIPQ8WZ33 124 aa15.73■□□□□ 0.11
COL6A1-203ENST00000466285 CITED4Q96RK1 184 aa15.73■□□□□ 0.11
COL6A1-203ENST00000466285 C19orf73Q9NVV2 129 aa15.73■□□□□ 0.11
COL6A1-203ENST00000466285 KCNK7Q9Y2U2 307 aa15.73■□□□□ 0.11
COL6A1-203ENST00000466285 SPDEFO95238 335 aa15.72■□□□□ 0.11
COL6A1-203ENST00000466285 TFAP2AP05549 437 aa15.72■□□□□ 0.11
COL6A1-203ENST00000466285 LYL1P12980 280 aa15.72■□□□□ 0.11
COL6A1-203ENST00000466285 TMEM267Q0VDI3 215 aaPredicted RBP15.72■□□□□ 0.11
COL6A1-203ENST00000466285 EDARADDQ8WWZ3 215 aa15.72■□□□□ 0.11
COL6A1-203ENST00000466285 FLYWCH2Q96CP2 140 aaKnown RBP15.72■□□□□ 0.11
COL6A1-203ENST00000466285 GHITMQ9H3K2 345 aa15.72■□□□□ 0.11
COL6A1-203ENST00000466285 PLGRKTQ9HBL7 147 aa15.72■□□□□ 0.11
COL6A1-203ENST00000466285 ALMS1Q8TCU4 4167 aa15.71■□□□□ 0.11
COL6A1-203ENST00000466285 LCE6AA0A183 80 aa15.71■□□□□ 0.11
COL6A1-203ENST00000466285 IZUMO1RA6ND01 250 aa15.71■□□□□ 0.11
COL6A1-203ENST00000466285 LDLRAD4O15165 306 aa15.71■□□□□ 0.11
COL6A1-203ENST00000466285 ARSBP15848 533 aa15.71■□□□□ 0.11
COL6A1-203ENST00000466285 DYRK1AQ13627 763 aa15.71■□□□□ 0.11
COL6A1-203ENST00000466285 IGSF11Q5DX21 431 aa15.71■□□□□ 0.11
COL6A1-203ENST00000466285 PDPNQ86YL7 162 aa15.71■□□□□ 0.11
COL6A1-203ENST00000466285 TSNAXQ99598 290 aaKnown RBP15.71■□□□□ 0.11
COL6A1-203ENST00000466285 THAP7Q9BT49 309 aaPredicted RBP15.71■□□□□ 0.11
COL6A1-203ENST00000466285 OR2D2Q9H210 308 aa15.71■□□□□ 0.11
COL6A1-203ENST00000466285 SLA2Q9H6Q3 261 aa15.71■□□□□ 0.11
COL6A1-203ENST00000466285 ZNF355PQ9NSJ1 428 aa15.71■□□□□ 0.11
COL6A1-203ENST00000466285 SLC35D1Q9NTN3 355 aa15.71■□□□□ 0.11
COL6A1-203ENST00000466285 HSF4Q9ULV5 492 aa15.71■□□□□ 0.11
COL6A1-203ENST00000466285 STUB1Q9UNE7 303 aa15.71■□□□□ 0.11
COL6A1-203ENST00000466285 SRRM4A7MD48 611 aaKnown RBP15.7■□□□□ 0.1
COL6A1-203ENST00000466285 SYNJ2BPP57105 145 aa15.7■□□□□ 0.1
COL6A1-203ENST00000466285 RAB11BQ15907 218 aa15.7■□□□□ 0.1
COL6A1-203ENST00000466285 ADAMTSL5Q6ZMM2 481 aa15.7■□□□□ 0.1
COL6A1-203ENST00000466285 UFD1Q92890 307 aa15.7■□□□□ 0.1
COL6A1-203ENST00000466285 RNF5Q99942 180 aa15.7■□□□□ 0.1
COL6A1-203ENST00000466285 CMSS1Q9BQ75 279 aaKnown RBP15.7■□□□□ 0.1
COL6A1-203ENST00000466285 ZMAT4Q9H898 229 aa15.7■□□□□ 0.1
COL6A1-203ENST00000466285 RETNQ9HD89 108 aa15.7■□□□□ 0.1
COL6A1-203ENST00000466285 SDHAF2Q9NX18 166 aa15.7■□□□□ 0.1
COL6A1-203ENST00000466285 ZNF221Q9UK13 617 aa15.7■□□□□ 0.1
COL6A1-203ENST00000466285 TMEM272A0A1B0GTI8 110 aa15.69■□□□□ 0.1
COL6A1-203ENST00000466285 SHISA3A0PJX4 238 aa15.69■□□□□ 0.1
COL6A1-203ENST00000466285 APOA2P02652 100 aa15.69■□□□□ 0.1
COL6A1-203ENST00000466285 FABP5Q01469 135 aa15.69■□□□□ 0.1
COL6A1-203ENST00000466285 KLF5Q13887 457 aaPredicted RBP15.69■□□□□ 0.1
COL6A1-203ENST00000466285 HES5Q5TA89 166 aa15.69■□□□□ 0.1
COL6A1-203ENST00000466285 URM1Q9BTM9 101 aaKnown RBP15.69■□□□□ 0.1
COL6A1-203ENST00000466285 RIMS4Q9H426 269 aaPredicted RBP15.69■□□□□ 0.1
COL6A1-203ENST00000466285 TRDCB7Z8K6 153 aa15.68■□□□□ 0.1
COL6A1-203ENST00000466285 BET1O15155 118 aa15.68■□□□□ 0.1
COL6A1-203ENST00000466285 GSTT2P0CG29 244 aa15.68■□□□□ 0.1
COL6A1-203ENST00000466285 GSTT2BP0CG30 244 aa15.68■□□□□ 0.1
COL6A1-203ENST00000466285 HSMCR30P0CW71 290 aa15.68■□□□□ 0.1
COL6A1-203ENST00000466285 EDN2P20800 178 aa15.68■□□□□ 0.1
COL6A1-203ENST00000466285 MAP2K4P45985 399 aa15.68■□□□□ 0.1
COL6A1-203ENST00000466285 AQP4P55087 323 aa15.68■□□□□ 0.1
COL6A1-203ENST00000466285 OR10A3P58181 314 aa15.68■□□□□ 0.1
COL6A1-203ENST00000466285 ANKRD13BQ86YJ7 626 aa15.68■□□□□ 0.1
COL6A1-203ENST00000466285 FAM3DQ96BQ1 224 aa15.68■□□□□ 0.1
COL6A1-203ENST00000466285 HARBI1Q96MB7 349 aa15.68■□□□□ 0.1
COL6A1-203ENST00000466285 CABLES2Q9BTV7 478 aa15.68■□□□□ 0.1
COL6A1-203ENST00000466285 VCXQ9H320 206 aa15.68■□□□□ 0.1
COL6A1-203ENST00000466285 PALMDQ9NP74 551 aa15.68■□□□□ 0.1
COL6A1-203ENST00000466285 ZNF230Q9UIE0 474 aaPredicted RBP15.68■□□□□ 0.1
COL6A1-203ENST00000466285 IGKV1D-8A0A087WSZ0 117 aa15.67■□□□□ 0.1
COL6A1-203ENST00000466285 A0A0B4J203 849 aa15.67■□□□□ 0.1
COL6A1-203ENST00000466285 C13orf42A0A1B0GVH6 325 aa15.67■□□□□ 0.1
COL6A1-203ENST00000466285 FABP7O15540 132 aa15.67■□□□□ 0.1
COL6A1-203ENST00000466285 CSN3P07498 182 aa15.67■□□□□ 0.1
COL6A1-203ENST00000466285 FCGR3AP08637 254 aa15.67■□□□□ 0.1
COL6A1-203ENST00000466285 CALRP27797 417 aaKnown RBP15.67■□□□□ 0.1
COL6A1-203ENST00000466285 TPBGQ13641 420 aa15.67■□□□□ 0.1
COL6A1-203ENST00000466285 C2orf76Q3KRA6 126 aa15.67■□□□□ 0.1
COL6A1-203ENST00000466285 IDO2Q6ZQW0 420 aa15.67■□□□□ 0.1
COL6A1-203ENST00000466285 BVESQ8NE79 360 aa15.67■□□□□ 0.1
COL6A1-203ENST00000466285 OR9G4Q8NGQ1 327 aa15.67■□□□□ 0.1
COL6A1-203ENST00000466285 TINAGL1Q9GZM7 467 aaPredicted RBP15.67■□□□□ 0.1
COL6A1-203ENST00000466285 VCX3BQ9H321 246 aa15.67■□□□□ 0.1
COL6A1-203ENST00000466285 RANGRFQ9HD47 186 aaPredicted RBP15.67■□□□□ 0.1
COL6A1-203ENST00000466285 A8MZ25 164 aa15.66■□□□□ 0.1
COL6A1-203ENST00000466285 CNIH1O95406 144 aa15.66■□□□□ 0.1
COL6A1-203ENST00000466285 PRH1P02810 166 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms