RNA–Protein interactions for RNA: ENST00000464577.1

USP48-206, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 2,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-206ENST00000464577 A0A1B0GUS0 222 aa6.13□□□□□ -1.43
USP48-206ENST00000464577 A0A1W2PR80 420 aa6.13□□□□□ -1.43
USP48-206ENST00000464577 NDUFB4O95168 129 aa6.13□□□□□ -1.43
USP48-206ENST00000464577 CLDN14O95500 239 aa6.13□□□□□ -1.43
USP48-206ENST00000464577 C1QTNF9P0C862 333 aa6.13□□□□□ -1.43
USP48-206ENST00000464577 IRF2P14316 349 aa6.13□□□□□ -1.43
USP48-206ENST00000464577 KITLGP21583 273 aa6.13□□□□□ -1.43
USP48-206ENST00000464577 CD82P27701 267 aa6.13□□□□□ -1.43
USP48-206ENST00000464577 BRS3P32247 399 aa6.13□□□□□ -1.43
USP48-206ENST00000464577 WNT5AP41221 380 aa6.13□□□□□ -1.43
USP48-206ENST00000464577 ATP5G3P48201 142 aa6.13□□□□□ -1.43
USP48-206ENST00000464577 LHX2P50458 406 aa6.13□□□□□ -1.43
USP48-206ENST00000464577 LINC00310P59036 64 aa6.13□□□□□ -1.43
USP48-206ENST00000464577 WIPI1Q5MNZ9 446 aaPredicted RBP6.13□□□□□ -1.43
USP48-206ENST00000464577 CST9LP1Q5W188 147 aa6.13□□□□□ -1.43
USP48-206ENST00000464577 OR5T1Q8NG75 326 aa6.13□□□□□ -1.43
USP48-206ENST00000464577 OR2Y1Q8NGV0 311 aa6.13□□□□□ -1.43
USP48-206ENST00000464577 PRR7Q8TB68 274 aa6.13□□□□□ -1.43
USP48-206ENST00000464577 THOC3Q96J01 351 aaKnown RBP6.13□□□□□ -1.43
USP48-206ENST00000464577 SPOCK3Q9BQ16 436 aa6.13□□□□□ -1.43
USP48-206ENST00000464577 PRRG4Q9BZD6 226 aa6.13□□□□□ -1.43
USP48-206ENST00000464577 LPAR2Q9HBW0 351 aa6.13□□□□□ -1.43
USP48-206ENST00000464577 IL17BQ9UHF5 180 aa6.13□□□□□ -1.43
USP48-206ENST00000464577 KIAA2026Q5HYC2 2103 aa6.12□□□□□ -1.43
USP48-206ENST00000464577 ABCA7Q8IZY2 2146 aa6.12□□□□□ -1.43
USP48-206ENST00000464577 TRBV9A0A0B4J1U6 114 aa6.12□□□□□ -1.43
USP48-206ENST00000464577 RBFOX2O43251 390 aaKnown RBP eCLIP6.12□□□□□ -1.43
USP48-206ENST00000464577 ZG16O60844 167 aa6.12□□□□□ -1.43
USP48-206ENST00000464577 MPDU1O75352 247 aa6.12□□□□□ -1.43
USP48-206ENST00000464577 OR2H2O95918 312 aa6.12□□□□□ -1.43
USP48-206ENST00000464577 NGFP01138 241 aa6.12□□□□□ -1.43
USP48-206ENST00000464577 CRYAAP02489 173 aa6.12□□□□□ -1.43
USP48-206ENST00000464577 IL6RP08887 468 aaPredicted RBP6.12□□□□□ -1.43
USP48-206ENST00000464577 RFPL3SP0C7P2 107 aa6.12□□□□□ -1.43
USP48-206ENST00000464577 CCL2P13500 99 aa6.12□□□□□ -1.43
USP48-206ENST00000464577 RAC2P15153 192 aa6.12□□□□□ -1.43
USP48-206ENST00000464577 G6PCP35575 357 aa6.12□□□□□ -1.43
USP48-206ENST00000464577 TIMP3P35625 211 aa6.12□□□□□ -1.43
USP48-206ENST00000464577 PLA2G5P39877 138 aa6.12□□□□□ -1.43
USP48-206ENST00000464577 GFRA1P56159 465 aa6.12□□□□□ -1.43
USP48-206ENST00000464577 ERVK11-1P61568 191 aa6.12□□□□□ -1.43
USP48-206ENST00000464577 MRPS11P82912 194 aaKnown RBP6.12□□□□□ -1.43
USP48-206ENST00000464577 Q0VG73 95 aa6.12□□□□□ -1.43
USP48-206ENST00000464577 WDR31Q8NA23 367 aa6.12□□□□□ -1.43
USP48-206ENST00000464577 ZNF114Q8NC26 417 aa6.12□□□□□ -1.43
USP48-206ENST00000464577 ZNF784Q8NCA9 323 aaPredicted RBP6.12□□□□□ -1.43
USP48-206ENST00000464577 OR10G8Q8NGN5 311 aa6.12□□□□□ -1.43
USP48-206ENST00000464577 TAAR6Q96RI8 345 aa6.12□□□□□ -1.43
USP48-206ENST00000464577 VAMP8Q9BV40 100 aa6.12□□□□□ -1.43
USP48-206ENST00000464577 OR2J1Q9GZK6 312 aa6.12□□□□□ -1.43
USP48-206ENST00000464577 IL36BQ9NZH7 164 aa6.12□□□□□ -1.43
USP48-206ENST00000464577 KCNIP1Q9NZI2 227 aa6.12□□□□□ -1.43
USP48-206ENST00000464577 LY96Q9Y6Y9 160 aa6.12□□□□□ -1.43
USP48-206ENST00000464577 CEP192Q8TEP8 1941 aa6.12□□□□□ -1.43
USP48-206ENST00000464577 A0A096LPE4 126 aa6.11□□□□□ -1.43
USP48-206ENST00000464577 TRAV39A0A0B4J263 110 aa6.11□□□□□ -1.43
USP48-206ENST00000464577 A0A1W2PPZ6 126 aa6.11□□□□□ -1.43
USP48-206ENST00000464577 ZNF503-AS2A6NEH8 195 aa6.11□□□□□ -1.43
USP48-206ENST00000464577 SIRPB1O00241 398 aa6.11□□□□□ -1.43
USP48-206ENST00000464577 RAMP3O60896 148 aa6.11□□□□□ -1.43
USP48-206ENST00000464577 RHBDL1O75783 438 aa6.11□□□□□ -1.43
USP48-206ENST00000464577 MMP23AO75900 390 aa6.11□□□□□ -1.43
USP48-206ENST00000464577 S1PR2O95136 353 aa6.11□□□□□ -1.43
USP48-206ENST00000464577 IGHV3-9P01782 118 aa6.11□□□□□ -1.43
USP48-206ENST00000464577 IGHEP01854 428 aa6.11□□□□□ -1.43
USP48-206ENST00000464577 NPSP0C0P6 89 aa6.11□□□□□ -1.43
USP48-206ENST00000464577 OPRK1P41145 380 aa6.11□□□□□ -1.43
USP48-206ENST00000464577 PLP2Q04941 152 aa6.11□□□□□ -1.43
USP48-206ENST00000464577 ZNF146Q15072 292 aa6.11□□□□□ -1.43
USP48-206ENST00000464577 CYB5R2Q6BCY4 276 aa6.11□□□□□ -1.43
USP48-206ENST00000464577 TCF23Q7RTU1 214 aa6.11□□□□□ -1.43
USP48-206ENST00000464577 PRR18Q8N4B5 295 aa6.11□□□□□ -1.43
USP48-206ENST00000464577 OR4B1Q8NGF8 309 aa6.11□□□□□ -1.43
USP48-206ENST00000464577 C5orf30Q96GV9 206 aa6.11□□□□□ -1.43
USP48-206ENST00000464577 TMEM204Q9BSN7 226 aa6.11□□□□□ -1.43
USP48-206ENST00000464577 DERL1Q9BUN8 251 aa6.11□□□□□ -1.43
USP48-206ENST00000464577 RTL8AQ9BWD3 113 aa6.11□□□□□ -1.43
USP48-206ENST00000464577 POLDIP2Q9Y2S7 368 aa6.11□□□□□ -1.43
USP48-206ENST00000464577 REV3LO60673 3130 aa6.11□□□□□ -1.43
USP48-206ENST00000464577 GON4LQ3T8J9 2241 aa6.11□□□□□ -1.43
USP48-206ENST00000464577 TRBV20OR9-2A0A075B6H5 130 aa6.11□□□□□ -1.43
USP48-206ENST00000464577 A0A1W2PPV4 95 aa6.11□□□□□ -1.43
USP48-206ENST00000464577 LNP1A1A4G5 178 aa6.11□□□□□ -1.43
USP48-206ENST00000464577 A6NNC1 897 aa6.11□□□□□ -1.43
USP48-206ENST00000464577 C15orf62A8K5M9 175 aa6.11□□□□□ -1.43
USP48-206ENST00000464577 TRAPPC6AO75865 159 aa6.11□□□□□ -1.43
USP48-206ENST00000464577 SERF1AO75920 110 aa6.11□□□□□ -1.43
USP48-206ENST00000464577 CXorf1O96002 111 aa6.11□□□□□ -1.43
USP48-206ENST00000464577 CRISP2P16562 243 aa6.11□□□□□ -1.43
USP48-206ENST00000464577 EGR1P18146 543 aa6.11□□□□□ -1.43
USP48-206ENST00000464577 FOLR3P41439 243 aa6.11□□□□□ -1.43
USP48-206ENST00000464577 UBE2G2P60604 165 aa6.11□□□□□ -1.43
USP48-206ENST00000464577 RPL30P62888 115 aaKnown RBP6.11□□□□□ -1.43
USP48-206ENST00000464577 ZNF90Q03938 601 aa6.11□□□□□ -1.43
USP48-206ENST00000464577 ZNF816Q0VGE8 651 aaPredicted RBP6.11□□□□□ -1.43
USP48-206ENST00000464577 HLA-BQ31612 363 aa6.11□□□□□ -1.43
USP48-206ENST00000464577 AARDQ4LEZ3 155 aa6.11□□□□□ -1.43
USP48-206ENST00000464577 ARSJQ5FYB0 599 aaPredicted RBP6.11□□□□□ -1.43
USP48-206ENST00000464577 COL5A1-AS1Q5SY13 56 aa6.11□□□□□ -1.43
USP48-206ENST00000464577 OR5AU1Q8NGC0 362 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms