RNA–Protein interactions for RNA: ENST00000464187.1

COL5A1-205, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 1,830 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-205ENST00000464187 EIF4EBP1Q13541 118 aaPredicted RBP12.03□□□□□ -0.48
COL5A1-205ENST00000464187 DEFB108BQ8NET1 73 aa12.03□□□□□ -0.48
COL5A1-205ENST00000464187 SPOCK3Q9BQ16 436 aa12.03□□□□□ -0.48
COL5A1-205ENST00000464187 UBTD1Q9HAC8 227 aa12.03□□□□□ -0.48
COL5A1-205ENST00000464187 RNF150Q9ULK6 438 aa12.03□□□□□ -0.48
COL5A1-205ENST00000464187 C9JQL5 133 aa12.02□□□□□ -0.48
COL5A1-205ENST00000464187 K7N7A8 449 aa12.02□□□□□ -0.48
COL5A1-205ENST00000464187 TSPAN15O95858 294 aa12.02□□□□□ -0.48
COL5A1-205ENST00000464187 F12P00748 615 aaPredicted RBP12.02□□□□□ -0.48
COL5A1-205ENST00000464187 SFTA3P0C7M3 94 aa12.02□□□□□ -0.48
COL5A1-205ENST00000464187 PPP1CCP36873 323 aaKnown RBP12.02□□□□□ -0.48
COL5A1-205ENST00000464187 SNCAP37840 140 aa12.02□□□□□ -0.48
COL5A1-205ENST00000464187 DVL1P1P54792 670 aaPredicted RBP12.02□□□□□ -0.48
COL5A1-205ENST00000464187 PAX5Q02548 391 aa12.02□□□□□ -0.48
COL5A1-205ENST00000464187 TEX36Q5VZQ5 186 aa12.02□□□□□ -0.48
COL5A1-205ENST00000464187 TMEM217Q8N7C4 229 aa12.02□□□□□ -0.48
COL5A1-205ENST00000464187 ZBTB34Q8NCN2 500 aa12.02□□□□□ -0.48
COL5A1-205ENST00000464187 LURAP1Q96LR2 239 aa12.02□□□□□ -0.48
COL5A1-205ENST00000464187 SEBOXQ9HB31 216 aaPredicted RBP12.02□□□□□ -0.48
COL5A1-205ENST00000464187 DSCAMO60469 2012 aa12.02□□□□□ -0.48
COL5A1-205ENST00000464187 DCHS2Q6V1P9 2916 aa12.02□□□□□ -0.49
COL5A1-205ENST00000464187 H3BP45 60 aa12.02□□□□□ -0.49
COL5A1-205ENST00000464187 TXNL1O43396 289 aa12.02□□□□□ -0.49
COL5A1-205ENST00000464187 ZNF737O75373 536 aa12.02□□□□□ -0.49
COL5A1-205ENST00000464187 GOSR1O95249 250 aa12.02□□□□□ -0.49
COL5A1-205ENST00000464187 PRH1P02810 166 aa12.02□□□□□ -0.49
COL5A1-205ENST00000464187 RPL30P62888 115 aaKnown RBP12.02□□□□□ -0.49
COL5A1-205ENST00000464187 STUMQ69YW2 141 aa12.02□□□□□ -0.49
COL5A1-205ENST00000464187 ZNRF1Q8ND25 227 aa12.02□□□□□ -0.49
COL5A1-205ENST00000464187 RAB40CQ96S21 281 aa12.02□□□□□ -0.49
COL5A1-205ENST00000464187 DCTN5Q9BTE1 182 aa12.02□□□□□ -0.49
COL5A1-205ENST00000464187 SCRT1Q9BWW7 348 aa12.02□□□□□ -0.49
COL5A1-205ENST00000464187 RAB1BQ9H0U4 201 aa12.02□□□□□ -0.49
COL5A1-205ENST00000464187 DYSFO75923 2080 aa12.02□□□□□ -0.49
COL5A1-205ENST00000464187 PPIAL4EA0A075B759 164 aa12.01□□□□□ -0.49
COL5A1-205ENST00000464187 PPIAL4DF5H284 164 aa12.01□□□□□ -0.49
COL5A1-205ENST00000464187 GYPAP02724 150 aa12.01□□□□□ -0.49
COL5A1-205ENST00000464187 PPIAL4FP0DN26 164 aa12.01□□□□□ -0.49
COL5A1-205ENST00000464187 ATF4P18848 351 aaPredicted RBP12.01□□□□□ -0.49
COL5A1-205ENST00000464187 RPL23AP62750 156 aaKnown RBP12.01□□□□□ -0.49
COL5A1-205ENST00000464187 TMEM267Q0VDI3 215 aaPredicted RBP12.01□□□□□ -0.49
COL5A1-205ENST00000464187 HFEQ30201 348 aa12.01□□□□□ -0.49
COL5A1-205ENST00000464187 COMMD1Q8N668 190 aa12.01□□□□□ -0.49
COL5A1-205ENST00000464187 OR2G3Q8NGZ4 309 aa12.01□□□□□ -0.49
COL5A1-205ENST00000464187 FAM213BQ8TBF2 198 aa12.01□□□□□ -0.49
COL5A1-205ENST00000464187 NINJ1Q92982 152 aa12.01□□□□□ -0.49
COL5A1-205ENST00000464187 ATP5SQ99766 215 aa12.01□□□□□ -0.49
COL5A1-205ENST00000464187 PPIAL4AQ9Y536 164 aa12.01□□□□□ -0.49
COL5A1-205ENST00000464187 IGHV3-43A0A0B4J1X8 118 aa12□□□□□ -0.49
COL5A1-205ENST00000464187 TRAV38-1A0A0B4J264 116 aa12□□□□□ -0.49
COL5A1-205ENST00000464187 MEX3AA1L020 520 aaKnown RBP12□□□□□ -0.49
COL5A1-205ENST00000464187 C15orf65H3BRN8 121 aa12□□□□□ -0.49
COL5A1-205ENST00000464187 TRIM77I1YAP6 450 aa12□□□□□ -0.49
COL5A1-205ENST00000464187 SYNGR2O43760 224 aa12□□□□□ -0.49
COL5A1-205ENST00000464187 RAMP3O60896 148 aa12□□□□□ -0.49
COL5A1-205ENST00000464187 IGHV3-43DP0DP04 118 aa12□□□□□ -0.49
COL5A1-205ENST00000464187 IAPPP10997 89 aa12□□□□□ -0.49
COL5A1-205ENST00000464187 NPBWR1P48145 328 aa12□□□□□ -0.49
COL5A1-205ENST00000464187 EDDM3AQ14507 147 aa12□□□□□ -0.49
COL5A1-205ENST00000464187 MSMO1Q15800 293 aa12□□□□□ -0.49
COL5A1-205ENST00000464187 SNX22Q96L94 193 aa12□□□□□ -0.49
COL5A1-205ENST00000464187 WSB1Q9Y6I7 421 aa12□□□□□ -0.49
COL5A1-205ENST00000464187 A1L4Q6 167 aa12□□□□□ -0.49
COL5A1-205ENST00000464187 LYNX1G3V0Z9 82 aa12□□□□□ -0.49
COL5A1-205ENST00000464187 CLDN1O95832 211 aa12□□□□□ -0.49
COL5A1-205ENST00000464187 LYNX1P0DP58 116 aa12□□□□□ -0.49
COL5A1-205ENST00000464187 SELLP14151 372 aa12□□□□□ -0.49
COL5A1-205ENST00000464187 COL8A2P25067 703 aa12□□□□□ -0.49
COL5A1-205ENST00000464187 SULT1A1P50225 295 aa12□□□□□ -0.49
COL5A1-205ENST00000464187 OR2B11Q5JQS5 317 aa12□□□□□ -0.49
COL5A1-205ENST00000464187 TRAT1Q6PIZ9 186 aa12□□□□□ -0.49
COL5A1-205ENST00000464187 STX12Q86Y82 276 aa12□□□□□ -0.49
COL5A1-205ENST00000464187 ZNF561Q8N587 486 aa12□□□□□ -0.49
COL5A1-205ENST00000464187 PPP1R35Q8TAP8 253 aa12□□□□□ -0.49
COL5A1-205ENST00000464187 SDSLQ96GA7 329 aa12□□□□□ -0.49
COL5A1-205ENST00000464187 ABHD14AQ9BUJ0 271 aa12□□□□□ -0.49
COL5A1-205ENST00000464187 ZNF665Q9H7R5 613 aa12□□□□□ -0.49
COL5A1-205ENST00000464187 LRRK2Q5S007 2527 aa11.99□□□□□ -0.49
COL5A1-205ENST00000464187 SNAPINO95295 136 aa11.99□□□□□ -0.49
COL5A1-205ENST00000464187 P0C879 139 aa11.99□□□□□ -0.49
COL5A1-205ENST00000464187 RUNX1Q01196 453 aa11.99□□□□□ -0.49
COL5A1-205ENST00000464187 ZNF816Q0VGE8 651 aaPredicted RBP11.99□□□□□ -0.49
COL5A1-205ENST00000464187 DUX4L9Q6RFH8 374 aaPredicted RBP11.99□□□□□ -0.49
COL5A1-205ENST00000464187 BTNL3Q6UXE8 466 aa11.99□□□□□ -0.49
COL5A1-205ENST00000464187 ZNF788Q6ZQV5 615 aa11.99□□□□□ -0.49
COL5A1-205ENST00000464187 FGFRL1Q8N441 504 aa11.99□□□□□ -0.49
COL5A1-205ENST00000464187 RFESDQ8TAC1 157 aa11.99□□□□□ -0.49
COL5A1-205ENST00000464187 GAFA1Q96PS6 74 aa11.99□□□□□ -0.49
COL5A1-205ENST00000464187 CCL13Q99616 98 aa11.99□□□□□ -0.49
COL5A1-205ENST00000464187 MMP24Q9Y5R2 645 aa11.99□□□□□ -0.49
COL5A1-205ENST00000464187 ODAMA1E959 279 aa11.98□□□□□ -0.49
COL5A1-205ENST00000464187 C17orf98A8MV24 154 aa11.98□□□□□ -0.49
COL5A1-205ENST00000464187 MGST3O14880 152 aa11.98□□□□□ -0.49
COL5A1-205ENST00000464187 TMPRSS2O15393 492 aa11.98□□□□□ -0.49
COL5A1-205ENST00000464187 SPINT2O43291 252 aa11.98□□□□□ -0.49
COL5A1-205ENST00000464187 LY6HO94772 140 aa11.98□□□□□ -0.49
COL5A1-205ENST00000464187 S1PR2O95136 353 aa11.98□□□□□ -0.49
COL5A1-205ENST00000464187 PLA2G2AP14555 144 aa11.98□□□□□ -0.49
COL5A1-205ENST00000464187 BRWD1-AS2P59051 145 aa11.98□□□□□ -0.49
COL5A1-205ENST00000464187 HTD2P86397 168 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms