RNA–Protein interactions for RNA: ENST00000460408.5

RFC4-211, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-211ENST00000460408 EPPK1P58107 5090 aaKnown RBP1.55□□□□□ -2.16
RFC4-211ENST00000460408 CACNA1CQ13936 2221 aa1.55□□□□□ -2.16
RFC4-211ENST00000460408 STAB2Q8WWQ8 2551 aa1.54□□□□□ -2.16
RFC4-211ENST00000460408 DOCK5Q9H7D0 1870 aa1.54□□□□□ -2.16
RFC4-211ENST00000460408 DYSFO75923 2080 aa1.54□□□□□ -2.16
RFC4-211ENST00000460408 IGHV3-21A0A0B4J1V1 117 aa1.54□□□□□ -2.16
RFC4-211ENST00000460408 ZNF729A6NN14 1252 aaPredicted RBP1.54□□□□□ -2.16
RFC4-211ENST00000460408 A8MWP4 228 aa1.54□□□□□ -2.16
RFC4-211ENST00000460408 C19orf84I3L1E1 186 aa1.54□□□□□ -2.16
RFC4-211ENST00000460408 I3L4J1 428 aa1.54□□□□□ -2.16
RFC4-211ENST00000460408 hCG_2039718K7EN88 272 aa1.54□□□□□ -2.16
RFC4-211ENST00000460408 CDIPTO14735 213 aa1.54□□□□□ -2.16
RFC4-211ENST00000460408 ENSAO43768 121 aaKnown RBP1.54□□□□□ -2.16
RFC4-211ENST00000460408 MYO1DO94832 1006 aa1.54□□□□□ -2.16
RFC4-211ENST00000460408 S100A9P06702 114 aaKnown RBP1.54□□□□□ -2.16
RFC4-211ENST00000460408 CCDC172P0C7W6 258 aa1.54□□□□□ -2.16
RFC4-211ENST00000460408 CNTFRP26992 372 aa1.54□□□□□ -2.16
RFC4-211ENST00000460408 GTF2H1P32780 548 aa1.54□□□□□ -2.16
RFC4-211ENST00000460408 TGFBR2P37173 567 aa1.54□□□□□ -2.16
RFC4-211ENST00000460408 CA7P43166 264 aa1.54□□□□□ -2.16
RFC4-211ENST00000460408 RANBP1P43487 201 aa1.54□□□□□ -2.16
RFC4-211ENST00000460408 LGALS7P47929 136 aa1.54□□□□□ -2.16
RFC4-211ENST00000460408 XKP51811 444 aa1.54□□□□□ -2.16
RFC4-211ENST00000460408 BAXQ07812 192 aa1.54□□□□□ -2.16
RFC4-211ENST00000460408 ITGB3BPQ13352 177 aaPredicted RBP1.54□□□□□ -2.16
RFC4-211ENST00000460408 PSG3Q16557 428 aa1.54□□□□□ -2.16
RFC4-211ENST00000460408 ACTBL2Q562R1 376 aa1.54□□□□□ -2.16
RFC4-211ENST00000460408 ERICH5Q6P6B1 374 aa1.54□□□□□ -2.16
RFC4-211ENST00000460408 KRTAP13-1Q8IUC0 172 aa1.54□□□□□ -2.16
RFC4-211ENST00000460408 C3orf22Q8N5N4 141 aa1.54□□□□□ -2.16
RFC4-211ENST00000460408 DNAAF3Q8N9W5 541 aa1.54□□□□□ -2.16
RFC4-211ENST00000460408 OR6K3Q8NGY3 331 aa1.54□□□□□ -2.16
RFC4-211ENST00000460408 ACTL9Q8TC94 416 aa1.54□□□□□ -2.16
RFC4-211ENST00000460408 LRRC20Q8TCA0 184 aa1.54□□□□□ -2.16
RFC4-211ENST00000460408 C2orf15Q8WU43 125 aaKnown RBP1.54□□□□□ -2.16
RFC4-211ENST00000460408 ZNF75AQ96N20 296 aa1.54□□□□□ -2.16
RFC4-211ENST00000460408 SIKE1Q9BRV8 207 aa1.54□□□□□ -2.16
RFC4-211ENST00000460408 TXNIPQ9H3M7 391 aa1.54□□□□□ -2.16
RFC4-211ENST00000460408 DSN1Q9H410 356 aa1.54□□□□□ -2.16
RFC4-211ENST00000460408 XKR8Q9H6D3 395 aa1.54□□□□□ -2.16
RFC4-211ENST00000460408 HAUS4Q9H6D7 363 aa1.54□□□□□ -2.16
RFC4-211ENST00000460408 NXT1Q9UKK6 140 aaKnown RBP1.54□□□□□ -2.16
RFC4-211ENST00000460408 SLC22A14Q9Y267 594 aa1.54□□□□□ -2.16
RFC4-211ENST00000460408 ICOSQ9Y6W8 199 aa1.54□□□□□ -2.16
RFC4-211ENST00000460408 PTPRJQ12913 1337 aa1.54□□□□□ -2.16
RFC4-211ENST00000460408 OBSL1O75147 1896 aa1.54□□□□□ -2.16
RFC4-211ENST00000460408 MYH6P13533 1939 aa1.54□□□□□ -2.16
RFC4-211ENST00000460408 TENM2Q9NT68 2774 aa1.53□□□□□ -2.16
RFC4-211ENST00000460408 ARGFXA6NJG6 315 aa1.53□□□□□ -2.16
RFC4-211ENST00000460408 RGS5O15539 181 aa1.53□□□□□ -2.16
RFC4-211ENST00000460408 AQP9O43315 295 aa1.53□□□□□ -2.16
RFC4-211ENST00000460408 TCF21O43680 179 aa1.53□□□□□ -2.16
RFC4-211ENST00000460408 IGKV1D-33P01593 117 aa1.53□□□□□ -2.16
RFC4-211ENST00000460408 IGKV1-33P01594 117 aa1.53□□□□□ -2.16
RFC4-211ENST00000460408 IGHV3-53P01767 116 aa1.53□□□□□ -2.16
RFC4-211ENST00000460408 SOD3P08294 240 aa1.53□□□□□ -2.16
RFC4-211ENST00000460408 ELK4P28324 431 aa1.53□□□□□ -2.16
RFC4-211ENST00000460408 LCN1P31025 176 aa1.53□□□□□ -2.16
RFC4-211ENST00000460408 TTPAP49638 278 aa1.53□□□□□ -2.16
RFC4-211ENST00000460408 CCL7P80098 99 aa1.53□□□□□ -2.16
RFC4-211ENST00000460408 BNIP2Q12982 314 aa1.53□□□□□ -2.16
RFC4-211ENST00000460408 ZNF141Q15928 474 aa1.53□□□□□ -2.16
RFC4-211ENST00000460408 DEFB133Q30KQ1 61 aa1.53□□□□□ -2.16
RFC4-211ENST00000460408 AADACL4Q5VUY2 407 aa1.53□□□□□ -2.16
RFC4-211ENST00000460408 DPPA2Q7Z7J5 298 aa1.53□□□□□ -2.16
RFC4-211ENST00000460408 MARCH3Q86UD3 253 aa1.53□□□□□ -2.16
RFC4-211ENST00000460408 CDRT4Q8N9R6 151 aa1.53□□□□□ -2.16
RFC4-211ENST00000460408 OR8G5Q8NG78 346 aa1.53□□□□□ -2.16
RFC4-211ENST00000460408 OR2Y1Q8NGV0 311 aa1.53□□□□□ -2.16
RFC4-211ENST00000460408 OR2AE1Q8NHA4 323 aa1.53□□□□□ -2.16
RFC4-211ENST00000460408 SPPL2BQ8TCT7 592 aa1.53□□□□□ -2.16
RFC4-211ENST00000460408 BBS2Q9BXC9 721 aa1.53□□□□□ -2.16
RFC4-211ENST00000460408 FBXL12Q9NXK8 326 aa1.53□□□□□ -2.16
RFC4-211ENST00000460408 ZNF230Q9UIE0 474 aaPredicted RBP1.53□□□□□ -2.16
RFC4-211ENST00000460408 ZNF443Q9Y2A4 671 aaPredicted RBP1.53□□□□□ -2.16
RFC4-211ENST00000460408 MYO5AQ9Y4I1 1855 aaKnown RBP1.53□□□□□ -2.16
RFC4-211ENST00000460408 U3KQA8 63 aa1.53□□□□□ -2.16
RFC4-211ENST00000460408 TNRC6AQ8NDV7 1962 aaKnown RBP1.52□□□□□ -2.17
RFC4-211ENST00000460408 TRRAPQ9Y4A5 3859 aa1.52□□□□□ -2.17
RFC4-211ENST00000460408 UBR4Q5T4S7 5183 aa1.52□□□□□ -2.17
RFC4-211ENST00000460408 A0A0D9SFI3 127 aa1.52□□□□□ -2.17
RFC4-211ENST00000460408 A0A1B0GW15 77 aa1.52□□□□□ -2.17
RFC4-211ENST00000460408 RAB19A4D1S5 217 aa1.52□□□□□ -2.17
RFC4-211ENST00000460408 PGPA6NDG6 321 aa1.52□□□□□ -2.17
RFC4-211ENST00000460408 C21orf140B9A014 251 aa1.52□□□□□ -2.17
RFC4-211ENST00000460408 F5H5P2 479 aa1.52□□□□□ -2.17
RFC4-211ENST00000460408 K7ERS5 55 aa1.52□□□□□ -2.17
RFC4-211ENST00000460408 PLPP3O14495 311 aa1.52□□□□□ -2.17
RFC4-211ENST00000460408 CYTH3O43739 400 aa1.52□□□□□ -2.17
RFC4-211ENST00000460408 CBR3O75828 277 aa1.52□□□□□ -2.17
RFC4-211ENST00000460408 CA2P00918 260 aa1.52□□□□□ -2.17
RFC4-211ENST00000460408 CST4P01036 141 aa1.52□□□□□ -2.17
RFC4-211ENST00000460408 IGHMP01871 453 aa1.52□□□□□ -2.17
RFC4-211ENST00000460408 HLA-AP01891 365 aaKnown RBP1.52□□□□□ -2.17
RFC4-211ENST00000460408 PRTN3P24158 256 aa1.52□□□□□ -2.17
RFC4-211ENST00000460408 IL12BP29460 328 aa1.52□□□□□ -2.17
RFC4-211ENST00000460408 TSPOP30536 169 aa1.52□□□□□ -2.17
RFC4-211ENST00000460408 ETV1P50549 477 aa1.52□□□□□ -2.17
RFC4-211ENST00000460408 PLTPP55058 493 aa1.52□□□□□ -2.17
RFC4-211ENST00000460408 VSNL1P62760 191 aa1.52□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms