RNA–Protein interactions for RNA: ENST00000457942.1

CHCHD3-204, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 4

Gene CHCHD3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-204ENST00000457942 RAB3CQ96E17 227 aa12.21□□□□□ -0.45
CHCHD3-204ENST00000457942 MS4A10Q96PG2 267 aa12.21□□□□□ -0.45
CHCHD3-204ENST00000457942 RDH8Q9NYR8 311 aa12.21□□□□□ -0.45
CHCHD3-204ENST00000457942 GAB2Q9UQC2 676 aa12.21□□□□□ -0.45
CHCHD3-204ENST00000457942 SMIM30A4D0T7 59 aa12.2□□□□□ -0.46
CHCHD3-204ENST00000457942 M0R1X1 148 aa12.2□□□□□ -0.46
CHCHD3-204ENST00000457942 SOX15O60248 233 aa12.2□□□□□ -0.46
CHCHD3-204ENST00000457942 IGHV3-11P01762 117 aa12.2□□□□□ -0.46
CHCHD3-204ENST00000457942 LGALS1P09382 135 aaKnown RBP12.2□□□□□ -0.46
CHCHD3-204ENST00000457942 GADD45AP24522 165 aa12.2□□□□□ -0.46
CHCHD3-204ENST00000457942 SLURP1P55000 103 aa12.2□□□□□ -0.46
CHCHD3-204ENST00000457942 TPPP2P59282 170 aa12.2□□□□□ -0.46
CHCHD3-204ENST00000457942 PSG5Q15238 335 aa12.2□□□□□ -0.46
CHCHD3-204ENST00000457942 NEDD8Q15843 81 aa12.2□□□□□ -0.46
CHCHD3-204ENST00000457942 ZNF429Q86V71 674 aa12.2□□□□□ -0.46
CHCHD3-204ENST00000457942 PDPNQ86YL7 162 aa12.2□□□□□ -0.46
CHCHD3-204ENST00000457942 LFNGQ8NES3 379 aa12.2□□□□□ -0.46
CHCHD3-204ENST00000457942 OR4A4PQ8NGN8 299 aa12.2□□□□□ -0.46
CHCHD3-204ENST00000457942 GRPEL2Q8TAA5 225 aa12.2□□□□□ -0.46
CHCHD3-204ENST00000457942 ARPC1AQ92747 370 aa12.2□□□□□ -0.46
CHCHD3-204ENST00000457942 PTX4Q96A99 478 aa12.2□□□□□ -0.46
CHCHD3-204ENST00000457942 RNF5Q99942 180 aa12.2□□□□□ -0.46
CHCHD3-204ENST00000457942 PALMDQ9NP74 551 aa12.2□□□□□ -0.46
CHCHD3-204ENST00000457942 ZNF355PQ9NSJ1 428 aa12.2□□□□□ -0.46
CHCHD3-204ENST00000457942 RAB22AQ9UL26 194 aa12.2□□□□□ -0.46
CHCHD3-204ENST00000457942 RBM7Q9Y580 266 aaKnown RBP12.2□□□□□ -0.46
CHCHD3-204ENST00000457942 IGHV4OR15-8A0A075B7B6 117 aa12.19□□□□□ -0.46
CHCHD3-204ENST00000457942 A0A087WW49 117 aa12.19□□□□□ -0.46
CHCHD3-204ENST00000457942 IGKV1-6A0A0C4DH72 117 aa12.19□□□□□ -0.46
CHCHD3-204ENST00000457942 FABP7O15540 132 aa12.19□□□□□ -0.46
CHCHD3-204ENST00000457942 SLC25A17O43808 307 aa12.19□□□□□ -0.46
CHCHD3-204ENST00000457942 SPDEFO95238 335 aa12.19□□□□□ -0.46
CHCHD3-204ENST00000457942 IGKV1-16P04430 117 aa12.19□□□□□ -0.46
CHCHD3-204ENST00000457942 SERPINB10P48595 397 aa12.19□□□□□ -0.46
CHCHD3-204ENST00000457942 CRIP2P52943 208 aaPredicted RBP12.19□□□□□ -0.46
CHCHD3-204ENST00000457942 LINC00205P59089 165 aa12.19□□□□□ -0.46
CHCHD3-204ENST00000457942 CBX3Q13185 183 aa12.19□□□□□ -0.46
CHCHD3-204ENST00000457942 UBE2UQ5VVX9 321 aa12.19□□□□□ -0.46
CHCHD3-204ENST00000457942 ZFAND6Q6FIF0 208 aa12.19□□□□□ -0.46
CHCHD3-204ENST00000457942 ZNF383Q8NA42 475 aa12.19□□□□□ -0.46
CHCHD3-204ENST00000457942 OR10J5Q8NHC4 309 aa12.19□□□□□ -0.46
CHCHD3-204ENST00000457942 FLYWCH2Q96CP2 140 aaKnown RBP12.19□□□□□ -0.46
CHCHD3-204ENST00000457942 YTHDF1Q9BYJ9 559 aaKnown RBP12.19□□□□□ -0.46
CHCHD3-204ENST00000457942 TOLLIPQ9H0E2 274 aa12.19□□□□□ -0.46
CHCHD3-204ENST00000457942 OR2D2Q9H210 308 aa12.19□□□□□ -0.46
CHCHD3-204ENST00000457942 SLC35D1Q9NTN3 355 aa12.19□□□□□ -0.46
CHCHD3-204ENST00000457942 NDUFB11Q9NX14 153 aa12.19□□□□□ -0.46
CHCHD3-204ENST00000457942 LSM4Q9Y4Z0 139 aaKnown RBP12.19□□□□□ -0.46
CHCHD3-204ENST00000457942 SORL1Q92673 2214 aa12.18□□□□□ -0.46
CHCHD3-204ENST00000457942 LCE6AA0A183 80 aa12.18□□□□□ -0.46
CHCHD3-204ENST00000457942 SHISA3A0PJX4 238 aa12.18□□□□□ -0.46
CHCHD3-204ENST00000457942 MRPS14O60783 128 aaKnown RBP12.18□□□□□ -0.46
CHCHD3-204ENST00000457942 CNIH1O95406 144 aa12.18□□□□□ -0.46
CHCHD3-204ENST00000457942 OR8U9P0C7N5 309 aa12.18□□□□□ -0.46
CHCHD3-204ENST00000457942 OR10A3P58181 314 aa12.18□□□□□ -0.46
CHCHD3-204ENST00000457942 PITPNAQ00169 270 aa12.18□□□□□ -0.46
CHCHD3-204ENST00000457942 PLA2G7Q13093 441 aa12.18□□□□□ -0.46
CHCHD3-204ENST00000457942 C19orf54Q5BKX5 351 aa12.18□□□□□ -0.46
CHCHD3-204ENST00000457942 C22orf42Q6IC83 251 aa12.18□□□□□ -0.46
CHCHD3-204ENST00000457942 CD200R1LQ6Q8B3 271 aa12.18□□□□□ -0.46
CHCHD3-204ENST00000457942 ZNF562Q6V9R5 426 aa12.18□□□□□ -0.46
CHCHD3-204ENST00000457942 MAFIPQ8WZ33 124 aa12.18□□□□□ -0.46
CHCHD3-204ENST00000457942 DLX4Q92988 240 aaPredicted RBP12.18□□□□□ -0.46
CHCHD3-204ENST00000457942 GINS4Q9BRT9 223 aa12.18□□□□□ -0.46
CHCHD3-204ENST00000457942 TPSG1Q9NRR2 321 aa12.18□□□□□ -0.46
CHCHD3-204ENST00000457942 NUBP2Q9Y5Y2 271 aa12.18□□□□□ -0.46
CHCHD3-204ENST00000457942 LDLRAD4O15165 306 aa12.17□□□□□ -0.46
CHCHD3-204ENST00000457942 TRGV3P03979 118 aa12.17□□□□□ -0.46
CHCHD3-204ENST00000457942 FCGR3AP08637 254 aa12.17□□□□□ -0.46
CHCHD3-204ENST00000457942 EGR2P11161 476 aaPredicted RBP12.17□□□□□ -0.46
CHCHD3-204ENST00000457942 GNB3P16520 340 aa12.17□□□□□ -0.46
CHCHD3-204ENST00000457942 TALDO1P37837 337 aa12.17□□□□□ -0.46
CHCHD3-204ENST00000457942 ARFRP1Q13795 201 aa12.17□□□□□ -0.46
CHCHD3-204ENST00000457942 FXYD3Q14802 87 aa12.17□□□□□ -0.46
CHCHD3-204ENST00000457942 MOGAT2Q3SYC2 334 aa12.17□□□□□ -0.46
CHCHD3-204ENST00000457942 KCTD21Q4G0X4 260 aa12.17□□□□□ -0.46
CHCHD3-204ENST00000457942 AKIRIN2Q53H80 203 aa12.17□□□□□ -0.46
CHCHD3-204ENST00000457942 IGSF11Q5DX21 431 aa12.17□□□□□ -0.46
CHCHD3-204ENST00000457942 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.17□□□□□ -0.46
CHCHD3-204ENST00000457942 OR10R2Q8NGX6 335 aa12.17□□□□□ -0.46
CHCHD3-204ENST00000457942 FCGR1BQ92637 280 aa12.17□□□□□ -0.46
CHCHD3-204ENST00000457942 HARBI1Q96MB7 349 aa12.17□□□□□ -0.46
CHCHD3-204ENST00000457942 SLA2Q9H6Q3 261 aa12.17□□□□□ -0.46
CHCHD3-204ENST00000457942 SMAD5-AS1Q9Y6J3 95 aa12.17□□□□□ -0.46
CHCHD3-204ENST00000457942 METTL21EPA6NDL7 271 aa12.16□□□□□ -0.46
CHCHD3-204ENST00000457942 PROP1O75360 226 aa12.16□□□□□ -0.46
CHCHD3-204ENST00000457942 GSTT2P0CG29 244 aa12.16□□□□□ -0.46
CHCHD3-204ENST00000457942 GSTT2BP0CG30 244 aa12.16□□□□□ -0.46
CHCHD3-204ENST00000457942 LYL1P12980 280 aa12.16□□□□□ -0.46
CHCHD3-204ENST00000457942 SNRPBP14678 240 aaKnown RBP12.16□□□□□ -0.46
CHCHD3-204ENST00000457942 RAB3BP20337 219 aa12.16□□□□□ -0.46
CHCHD3-204ENST00000457942 OR6Q1Q8NGQ2 317 aa12.16□□□□□ -0.46
CHCHD3-204ENST00000457942 RCHY1Q96PM5 261 aa12.16□□□□□ -0.46
CHCHD3-204ENST00000457942 OR4C12Q96R67 309 aa12.16□□□□□ -0.46
CHCHD3-204ENST00000457942 CABLES2Q9BTV7 478 aa12.16□□□□□ -0.46
CHCHD3-204ENST00000457942 ZNF230Q9UIE0 474 aaPredicted RBP12.16□□□□□ -0.46
CHCHD3-204ENST00000457942 STARD9Q9P2P6 4700 aa12.15□□□□□ -0.46
CHCHD3-204ENST00000457942 A0A0B4J203 849 aa12.15□□□□□ -0.46
CHCHD3-204ENST00000457942 TRAV1-2A0A0B4J238 106 aa12.15□□□□□ -0.46
CHCHD3-204ENST00000457942 C13orf42A0A1B0GVH6 325 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms