RNA–Protein interactions for RNA: ENST00000456948.5

CBX3-204, Transcript of chromobox 3, humanhuman

TSL 5

Gene CBX3, Length 1,068 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-204ENST00000456948 ANKRD13BQ86YJ7 626 aa18.25■□□□□ 0.51
CBX3-204ENST00000456948 BEST4Q8NFU0 473 aa18.25■□□□□ 0.51
CBX3-204ENST00000456948 CMTM3Q96MX0 182 aa18.25■□□□□ 0.51
CBX3-204ENST00000456948 SSX5O60225 188 aa18.24■□□□□ 0.51
CBX3-204ENST00000456948 RPL23AP62750 156 aaKnown RBP18.24■□□□□ 0.51
CBX3-204ENST00000456948 TMEM267Q0VDI3 215 aaPredicted RBP18.24■□□□□ 0.51
CBX3-204ENST00000456948 MZT2AQ6P582 158 aa18.24■□□□□ 0.51
CBX3-204ENST00000456948 AP3S1Q92572 193 aa18.24■□□□□ 0.51
CBX3-204ENST00000456948 IFT46Q9NQC8 304 aa18.24■□□□□ 0.51
CBX3-204ENST00000456948 PARP11Q9NR21 331 aa18.24■□□□□ 0.51
CBX3-204ENST00000456948 PROP1O75360 226 aa18.23■□□□□ 0.51
CBX3-204ENST00000456948 SMIM18P0DKX4 95 aa18.23■□□□□ 0.51
CBX3-204ENST00000456948 CD33P20138 364 aa18.23■□□□□ 0.51
CBX3-204ENST00000456948 TMEM65Q6PI78 240 aa18.23■□□□□ 0.51
CBX3-204ENST00000456948 HOGA1Q86XE5 327 aa18.23■□□□□ 0.51
CBX3-204ENST00000456948 ZNF645Q8N7E2 425 aa18.23■□□□□ 0.51
CBX3-204ENST00000456948 FBXL15Q9H469 300 aa18.23■□□□□ 0.51
CBX3-204ENST00000456948 NECAP2Q9NVZ3 263 aa18.23■□□□□ 0.51
CBX3-204ENST00000456948 COMMD3Q9UBI1 195 aa18.23■□□□□ 0.51
CBX3-204ENST00000456948 METTL1Q9UBP6 276 aaKnown RBP18.23■□□□□ 0.51
CBX3-204ENST00000456948 HLA-DQB1P01920 261 aa18.22■□□□□ 0.51
CBX3-204ENST00000456948 NFYAP23511 347 aaPredicted RBP18.22■□□□□ 0.51
CBX3-204ENST00000456948 ABHD5Q8WTS1 349 aa18.22■□□□□ 0.51
CBX3-204ENST00000456948 RBMXL1Q96E39 390 aaKnown RBP18.22■□□□□ 0.51
CBX3-204ENST00000456948 PRELID3BQ9Y3B1 194 aa18.22■□□□□ 0.51
CBX3-204ENST00000456948 IGHV7-81A0A0B4J1V7 117 aa18.21■□□□□ 0.51
CBX3-204ENST00000456948 J3QRK9 145 aa18.21■□□□□ 0.51
CBX3-204ENST00000456948 SHOXO15266 292 aa18.21■□□□□ 0.51
CBX3-204ENST00000456948 IGHG4P01861 327 aa18.21■□□□□ 0.51
CBX3-204ENST00000456948 APOA1P02647 267 aa18.21■□□□□ 0.51
CBX3-204ENST00000456948 IGKV1-16P04430 117 aa18.21■□□□□ 0.51
CBX3-204ENST00000456948 CD40LGP29965 261 aa18.21■□□□□ 0.51
CBX3-204ENST00000456948 PSG5Q15238 335 aa18.21■□□□□ 0.51
CBX3-204ENST00000456948 GPR107Q5VW38 600 aa18.21■□□□□ 0.51
CBX3-204ENST00000456948 ZNF695Q8IW36 515 aa18.21■□□□□ 0.51
CBX3-204ENST00000456948 TCTEX1D1Q8N7M0 179 aa18.21■□□□□ 0.51
CBX3-204ENST00000456948 TRAV41A0A0B4J266 112 aa18.2■□□□□ 0.5
CBX3-204ENST00000456948 GABARAPO95166 117 aa18.2■□□□□ 0.5
CBX3-204ENST00000456948 ZNF562Q6V9R5 426 aa18.2■□□□□ 0.5
CBX3-204ENST00000456948 KLHL30-AS1Q8NEE0 82 aa18.2■□□□□ 0.5
CBX3-204ENST00000456948 MRPS7Q9Y2R9 242 aaKnown RBP18.2■□□□□ 0.5
CBX3-204ENST00000456948 WSB1Q9Y6I7 421 aa18.2■□□□□ 0.5
CBX3-204ENST00000456948 PLXNB1O43157 2135 aa18.2■□□□□ 0.5
CBX3-204ENST00000456948 ATP6V0E1O15342 81 aa18.19■□□□□ 0.5
CBX3-204ENST00000456948 DUTP33316 252 aaKnown RBP18.19■□□□□ 0.5
CBX3-204ENST00000456948 PRSS3P35030 304 aa18.19■□□□□ 0.5
CBX3-204ENST00000456948 CX3CL1P78423 397 aa18.19■□□□□ 0.5
CBX3-204ENST00000456948 GVQW1Q8N7I0 195 aa18.19■□□□□ 0.5
CBX3-204ENST00000456948 RNF152Q8N8N0 203 aa18.19■□□□□ 0.5
CBX3-204ENST00000456948 BVESQ8NE79 360 aa18.19■□□□□ 0.5
CBX3-204ENST00000456948 HARBI1Q96MB7 349 aa18.19■□□□□ 0.5
CBX3-204ENST00000456948 NOTCH3Q9UM47 2321 aa18.18■□□□□ 0.5
CBX3-204ENST00000456948 SLC25A17O43808 307 aa18.18■□□□□ 0.5
CBX3-204ENST00000456948 TUSC2O75896 110 aa18.18■□□□□ 0.5
CBX3-204ENST00000456948 DUS4LO95620 317 aaKnown RBP18.18■□□□□ 0.5
CBX3-204ENST00000456948 FCGR2CP31995 323 aa18.18■□□□□ 0.5
CBX3-204ENST00000456948 CDX1P47902 265 aaPredicted RBP18.18■□□□□ 0.5
CBX3-204ENST00000456948 LINC00205P59089 165 aa18.18■□□□□ 0.5
CBX3-204ENST00000456948 TAS2R20P59543 309 aa18.18■□□□□ 0.5
CBX3-204ENST00000456948 TMEM177Q53S58 311 aa18.18■□□□□ 0.5
CBX3-204ENST00000456948 PPP1R27Q86WC6 154 aa18.18■□□□□ 0.5
CBX3-204ENST00000456948 WFDC9Q8NEX5 89 aa18.18■□□□□ 0.5
CBX3-204ENST00000456948 OR5AP2Q8NGF4 316 aa18.18■□□□□ 0.5
CBX3-204ENST00000456948 BORCS5Q969J3 196 aa18.18■□□□□ 0.5
CBX3-204ENST00000456948 CLCC1Q96S66 551 aa18.18■□□□□ 0.5
CBX3-204ENST00000456948 HSD17B10Q99714 261 aaKnown RBP18.18■□□□□ 0.5
CBX3-204ENST00000456948 DCUN1D5Q9BTE7 237 aa18.18■□□□□ 0.5
CBX3-204ENST00000456948 CNIH1O95406 144 aa18.17■□□□□ 0.5
CBX3-204ENST00000456948 RPLP1P05386 114 aaKnown RBP18.17■□□□□ 0.5
CBX3-204ENST00000456948 ZNF182P17025 639 aaPredicted RBP18.17■□□□□ 0.5
CBX3-204ENST00000456948 MYCNOSP40205 109 aa18.17■□□□□ 0.5
CBX3-204ENST00000456948 CFHR3Q02985 330 aa18.17■□□□□ 0.5
CBX3-204ENST00000456948 CTF1Q16619 201 aa18.17■□□□□ 0.5
CBX3-204ENST00000456948 VMA21Q3ZAQ7 101 aa18.17■□□□□ 0.5
CBX3-204ENST00000456948 OSR1Q8TAX0 266 aaPredicted RBP18.17■□□□□ 0.5
CBX3-204ENST00000456948 GPR61Q9BZJ8 451 aa18.17■□□□□ 0.5
CBX3-204ENST00000456948 RBMX2Q9Y388 322 aaKnown RBP18.17■□□□□ 0.5
CBX3-204ENST00000456948 NOTCH1P46531 2555 aa18.17■□□□□ 0.5
CBX3-204ENST00000456948 CREBL2O60519 120 aaPredicted RBP18.16■□□□□ 0.5
CBX3-204ENST00000456948 PSMB8P28062 276 aa18.16■□□□□ 0.5
CBX3-204ENST00000456948 ALDH3B2P48448 385 aa18.16■□□□□ 0.5
CBX3-204ENST00000456948 TAS2R46P59540 309 aa18.16■□□□□ 0.5
CBX3-204ENST00000456948 CDK10Q15131 360 aa18.16■□□□□ 0.5
CBX3-204ENST00000456948 MSMO1Q15800 293 aa18.16■□□□□ 0.5
CBX3-204ENST00000456948 ECSCRQ19T08 205 aa18.16■□□□□ 0.5
CBX3-204ENST00000456948 PDLIM3Q53GG5 364 aaPredicted RBP18.16■□□□□ 0.5
CBX3-204ENST00000456948 PYHIN1Q6K0P9 492 aa18.16■□□□□ 0.5
CBX3-204ENST00000456948 KCTD9Q7L273 389 aa18.16■□□□□ 0.5
CBX3-204ENST00000456948 C1QL4Q86Z23 238 aa18.16■□□□□ 0.5
CBX3-204ENST00000456948 ZBTB34Q8NCN2 500 aa18.16■□□□□ 0.5
CBX3-204ENST00000456948 FOXA2Q9Y261 457 aaPredicted RBP18.16■□□□□ 0.5
CBX3-204ENST00000456948 G3V318 75 aa18.15■□□□□ 0.5
CBX3-204ENST00000456948 FCN1O00602 326 aa18.15■□□□□ 0.5
CBX3-204ENST00000456948 NOL3O60936 208 aaKnown RBP18.15■□□□□ 0.5
CBX3-204ENST00000456948 CRYZL1O95825 349 aa18.15■□□□□ 0.5
CBX3-204ENST00000456948 CA2P00918 260 aa18.15■□□□□ 0.5
CBX3-204ENST00000456948 PPIFP30405 207 aaKnown RBP18.15■□□□□ 0.5
CBX3-204ENST00000456948 AKIRIN2Q53H80 203 aa18.15■□□□□ 0.5
CBX3-204ENST00000456948 ZNF66Q6ZN08 573 aa18.15■□□□□ 0.5
CBX3-204ENST00000456948 C8orf86Q6ZUL3 223 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms