RNA–Protein interactions for RNA: ENST00000455631.5

PTPRA-208, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5

Gene PTPRA, Length 1,107 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-208ENST00000455631 IGLV2-23P01705 113 aa17.42■□□□□ 0.38
PTPRA-208ENST00000455631 ZBTB25P24278 435 aa17.42■□□□□ 0.38
PTPRA-208ENST00000455631 CEACAM6P40199 344 aa17.42■□□□□ 0.38
PTPRA-208ENST00000455631 MOB1BQ7L9L4 216 aa17.42■□□□□ 0.38
PTPRA-208ENST00000455631 ZFP41Q8N8Y5 198 aa17.42■□□□□ 0.38
PTPRA-208ENST00000455631 FGF20Q9NP95 211 aaPredicted RBP17.42■□□□□ 0.38
PTPRA-208ENST00000455631 ZNF230Q9UIE0 474 aaPredicted RBP17.42■□□□□ 0.38
PTPRA-208ENST00000455631 ZNF221Q9UK13 617 aa17.42■□□□□ 0.38
PTPRA-208ENST00000455631 SELENOKQ9Y6D0 94 aa17.42■□□□□ 0.38
PTPRA-208ENST00000455631 C2orf70A6NJV1 201 aa17.41■□□□□ 0.38
PTPRA-208ENST00000455631 NAPSAO96009 420 aa17.41■□□□□ 0.38
PTPRA-208ENST00000455631 FOLR2P14207 255 aa17.41■□□□□ 0.38
PTPRA-208ENST00000455631 KIR2DS2P43631 304 aa17.41■□□□□ 0.38
PTPRA-208ENST00000455631 RHOGP84095 191 aa17.41■□□□□ 0.38
PTPRA-208ENST00000455631 ZNF880Q6PDB4 577 aa17.41■□□□□ 0.38
PTPRA-208ENST00000455631 NKAIN3Q8N8D7 197 aa17.41■□□□□ 0.38
PTPRA-208ENST00000455631 ADAD2Q8NCV1 583 aaKnown RBP17.41■□□□□ 0.38
PTPRA-208ENST00000455631 GATAD1Q8WUU5 269 aa17.41■□□□□ 0.38
PTPRA-208ENST00000455631 HARBI1Q96MB7 349 aa17.41■□□□□ 0.38
PTPRA-208ENST00000455631 LOC102724200A0A096LPH7 203 aaPredicted RBP17.4■□□□□ 0.38
PTPRA-208ENST00000455631 DYNC1I1O14576 645 aa17.4■□□□□ 0.38
PTPRA-208ENST00000455631 NDUFB8O95169 186 aa17.4■□□□□ 0.38
PTPRA-208ENST00000455631 CRYGBP07316 175 aa17.4■□□□□ 0.38
PTPRA-208ENST00000455631 LYG2Q86SG7 212 aa17.4■□□□□ 0.38
PTPRA-208ENST00000455631 APH1BQ8WW43 257 aa17.4■□□□□ 0.38
PTPRA-208ENST00000455631 PGLYRP3Q96LB9 341 aa17.4■□□□□ 0.38
PTPRA-208ENST00000455631 AKIP1Q9NQ31 210 aa17.4■□□□□ 0.38
PTPRA-208ENST00000455631 TECRQ9NZ01 308 aaKnown RBP17.4■□□□□ 0.38
PTPRA-208ENST00000455631 GHRLQ9UBU3 117 aa17.4■□□□□ 0.38
PTPRA-208ENST00000455631 KIAA1109Q2LD37 5005 aa17.39■□□□□ 0.37
PTPRA-208ENST00000455631 MSGN1A6NI15 193 aa17.39■□□□□ 0.37
PTPRA-208ENST00000455631 FAM223BA6NKX1 122 aa17.39■□□□□ 0.37
PTPRA-208ENST00000455631 M0R1X1 148 aa17.39■□□□□ 0.37
PTPRA-208ENST00000455631 MPPED1O15442 326 aa17.39■□□□□ 0.37
PTPRA-208ENST00000455631 TUSC2O75896 110 aa17.39■□□□□ 0.37
PTPRA-208ENST00000455631 OR9G9P0C7N8 305 aa17.39■□□□□ 0.37
PTPRA-208ENST00000455631 DCKP27707 260 aa17.39■□□□□ 0.37
PTPRA-208ENST00000455631 ATP5G2Q06055 141 aa17.39■□□□□ 0.37
PTPRA-208ENST00000455631 OR10K2Q6IF99 312 aa17.39■□□□□ 0.37
PTPRA-208ENST00000455631 FAM223AQ8IWN6 122 aa17.39■□□□□ 0.37
PTPRA-208ENST00000455631 CBR4Q8N4T8 237 aa17.39■□□□□ 0.37
PTPRA-208ENST00000455631 THRSPQ92748 146 aa17.39■□□□□ 0.37
PTPRA-208ENST00000455631 SLC29A1Q99808 456 aa17.39■□□□□ 0.37
PTPRA-208ENST00000455631 UQCC2Q9BRT2 126 aa17.39■□□□□ 0.37
PTPRA-208ENST00000455631 PRH1P02810 166 aa17.38■□□□□ 0.37
PTPRA-208ENST00000455631 MYL12AP19105 171 aa17.38■□□□□ 0.37
PTPRA-208ENST00000455631 HLA-DRB3P79483 266 aa17.38■□□□□ 0.37
PTPRA-208ENST00000455631 TNFRSF9Q07011 255 aa17.38■□□□□ 0.37
PTPRA-208ENST00000455631 SMN1Q16637 294 aaKnown RBP17.38■□□□□ 0.37
PTPRA-208ENST00000455631 OR52B4Q8NGK2 314 aa17.38■□□□□ 0.37
PTPRA-208ENST00000455631 KCNG3Q8TAE7 436 aa17.38■□□□□ 0.37
PTPRA-208ENST00000455631 PYDC1Q8WXC3 89 aa17.38■□□□□ 0.37
PTPRA-208ENST00000455631 DERL3Q96Q80 235 aa17.38■□□□□ 0.37
PTPRA-208ENST00000455631 DNAH10Q8IVF4 4471 aa17.38■□□□□ 0.37
PTPRA-208ENST00000455631 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP17.37■□□□□ 0.37
PTPRA-208ENST00000455631 PNMA8CA0A1B0GUJ8 204 aa17.37■□□□□ 0.37
PTPRA-208ENST00000455631 CACNG8Q8WXS5 425 aa17.37■□□□□ 0.37
PTPRA-208ENST00000455631 PTX4Q96A99 478 aa17.37■□□□□ 0.37
PTPRA-208ENST00000455631 NICN1Q9BSH3 213 aa17.37■□□□□ 0.37
PTPRA-208ENST00000455631 TMEM59Q9BXS4 323 aa17.37■□□□□ 0.37
PTPRA-208ENST00000455631 PPP5D1E7EU14 171 aa17.36■□□□□ 0.37
PTPRA-208ENST00000455631 SHOXO15266 292 aa17.36■□□□□ 0.37
PTPRA-208ENST00000455631 HTR2CP28335 458 aa17.36■□□□□ 0.37
PTPRA-208ENST00000455631 RPS27AP62979 156 aaKnown RBP17.36■□□□□ 0.37
PTPRA-208ENST00000455631 TNXAQ16473 311 aa17.36■□□□□ 0.37
PTPRA-208ENST00000455631 LGALS9CQ6DKI2 356 aa17.36■□□□□ 0.37
PTPRA-208ENST00000455631 TMEM61Q8N0U2 210 aa17.36■□□□□ 0.37
PTPRA-208ENST00000455631 HDHD3Q9BSH5 251 aaPredicted RBP17.36■□□□□ 0.37
PTPRA-208ENST00000455631 CLEC2DQ9UHP7 191 aa17.36■□□□□ 0.37
PTPRA-208ENST00000455631 HECTD4Q9Y4D8 3996 aa17.36■□□□□ 0.37
PTPRA-208ENST00000455631 HLA-AP01891 365 aaKnown RBP17.35■□□□□ 0.37
PTPRA-208ENST00000455631 UBBP0CG47 229 aa17.35■□□□□ 0.37
PTPRA-208ENST00000455631 ZNF45Q02386 682 aa17.35■□□□□ 0.37
PTPRA-208ENST00000455631 CBX3Q13185 183 aa17.35■□□□□ 0.37
PTPRA-208ENST00000455631 WFDC3Q8IUB2 231 aa17.35■□□□□ 0.37
PTPRA-208ENST00000455631 SRSF12Q8WXF0 261 aaKnown RBP17.35■□□□□ 0.37
PTPRA-208ENST00000455631 PLEKHJ1Q9NW61 149 aa17.35■□□□□ 0.37
PTPRA-208ENST00000455631 LOC100130705A0A1B0GUX0 176 aa17.34■□□□□ 0.37
PTPRA-208ENST00000455631 SCTP09683 121 aa17.34■□□□□ 0.37
PTPRA-208ENST00000455631 BMI1P35226 326 aa17.34■□□□□ 0.37
PTPRA-208ENST00000455631 ZNF57Q68EA5 555 aaPredicted RBP17.34■□□□□ 0.37
PTPRA-208ENST00000455631 RIMS4Q9H426 269 aaPredicted RBP17.34■□□□□ 0.37
PTPRA-208ENST00000455631 KCNK15Q9H427 330 aa17.34■□□□□ 0.37
PTPRA-208ENST00000455631 AK3Q9UIJ7 227 aa17.34■□□□□ 0.37
PTPRA-208ENST00000455631 EXOSC1Q9Y3B2 195 aaKnown RBP17.34■□□□□ 0.37
PTPRA-208ENST00000455631 TRBV6-6A0A0A6YYG2 114 aa17.33■□□□□ 0.36
PTPRA-208ENST00000455631 TRBV9A0A0B4J1U6 114 aa17.33■□□□□ 0.36
PTPRA-208ENST00000455631 SPRY2O43597 315 aa17.33■□□□□ 0.36
PTPRA-208ENST00000455631 WBP4O75554 376 aaKnown RBP17.33■□□□□ 0.36
PTPRA-208ENST00000455631 SCAF4O95104 1147 aaKnown RBP17.33■□□□□ 0.36
PTPRA-208ENST00000455631 CBLN1P23435 193 aa17.33■□□□□ 0.36
PTPRA-208ENST00000455631 MRGPRG-AS1Q2M3A8 158 aa17.33■□□□□ 0.36
PTPRA-208ENST00000455631 DEFB135Q30KP9 77 aa17.33■□□□□ 0.36
PTPRA-208ENST00000455631 ZNF436-AS1Q8NC38 126 aaPredicted RBP17.33■□□□□ 0.36
PTPRA-208ENST00000455631 ACOT12Q8WYK0 555 aa17.33■□□□□ 0.36
PTPRA-208ENST00000455631 RDH8Q9NYR8 311 aa17.33■□□□□ 0.36
PTPRA-208ENST00000455631 MGAT4AQ9UM21 535 aa17.33■□□□□ 0.36
PTPRA-208ENST00000455631 DIMT1Q9UNQ2 313 aaKnown RBP17.33■□□□□ 0.36
PTPRA-208ENST00000455631 TP53TG1Q9Y2A0 90 aa17.33■□□□□ 0.36
PTPRA-208ENST00000455631 IRGMA1A4Y4 181 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms