RNA–Protein interactions for RNA: ENST00000455069.1

HDAC9-217, Transcript of histone deacetylase 9, humanhuman

TSL 4

Gene HDAC9, Length 553 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-217ENST00000455069 TCRBV4S1A1TA0A5B7 111 aa8.87□□□□□ -0.99
HDAC9-217ENST00000455069 FCN1O00602 326 aa8.87□□□□□ -0.99
HDAC9-217ENST00000455069 ATP6V0E1O15342 81 aa8.87□□□□□ -0.99
HDAC9-217ENST00000455069 RBBP9O75884 186 aa8.87□□□□□ -0.99
HDAC9-217ENST00000455069 IGLV2-23P01705 113 aa8.87□□□□□ -0.99
HDAC9-217ENST00000455069 APOA1P02647 267 aa8.87□□□□□ -0.99
HDAC9-217ENST00000455069 OPN1MWP04001 364 aa8.87□□□□□ -0.99
HDAC9-217ENST00000455069 IGF1P05019 195 aa8.87□□□□□ -0.99
HDAC9-217ENST00000455069 CTXN2P0C2S0 81 aa8.87□□□□□ -0.99
HDAC9-217ENST00000455069 OPN1MW2P0DN77 364 aa8.87□□□□□ -0.99
HDAC9-217ENST00000455069 OPN1MW3P0DN78 364 aa8.87□□□□□ -0.99
HDAC9-217ENST00000455069 ELK1P19419 428 aa8.87□□□□□ -0.99
HDAC9-217ENST00000455069 DUTP33316 252 aaKnown RBP8.87□□□□□ -0.99
HDAC9-217ENST00000455069 RORCP51449 518 aa8.87□□□□□ -0.99
HDAC9-217ENST00000455069 EIF4EBP1Q13541 118 aaPredicted RBP8.87□□□□□ -0.99
HDAC9-217ENST00000455069 LCNL1Q6ZST4 164 aa8.87□□□□□ -0.99
HDAC9-217ENST00000455069 PDPNQ86YL7 162 aa8.87□□□□□ -0.99
HDAC9-217ENST00000455069 ZNF645Q8N7E2 425 aa8.87□□□□□ -0.99
HDAC9-217ENST00000455069 R3HDM4Q96D70 268 aa8.87□□□□□ -0.99
HDAC9-217ENST00000455069 SLC35D1Q9NTN3 355 aa8.87□□□□□ -0.99
HDAC9-217ENST00000455069 ZNF580Q9UK33 172 aa8.87□□□□□ -0.99
HDAC9-217ENST00000455069 RBM7Q9Y580 266 aaKnown RBP8.87□□□□□ -0.99
HDAC9-217ENST00000455069 TSSC4Q9Y5U2 329 aaPredicted RBP8.87□□□□□ -0.99
HDAC9-217ENST00000455069 G3V318 75 aa8.86□□□□□ -0.99
HDAC9-217ENST00000455069 APOA2P02652 100 aa8.86□□□□□ -0.99
HDAC9-217ENST00000455069 EGR2P11161 476 aaPredicted RBP8.86□□□□□ -0.99
HDAC9-217ENST00000455069 AADACP22760 399 aa8.86□□□□□ -0.99
HDAC9-217ENST00000455069 PPIFP30405 207 aaKnown RBP8.86□□□□□ -0.99
HDAC9-217ENST00000455069 THBS3P49746 956 aa8.86□□□□□ -0.99
HDAC9-217ENST00000455069 ARPC4P59998 168 aa8.86□□□□□ -0.99
HDAC9-217ENST00000455069 RPL23AP62750 156 aaKnown RBP8.86□□□□□ -0.99
HDAC9-217ENST00000455069 SSBP2P81877 361 aaPredicted RBP8.86□□□□□ -0.99
HDAC9-217ENST00000455069 PSG5Q15238 335 aa8.86□□□□□ -0.99
HDAC9-217ENST00000455069 C19orf54Q5BKX5 351 aa8.86□□□□□ -0.99
HDAC9-217ENST00000455069 KHDC1LQ5JSQ8 128 aa8.86□□□□□ -0.99
HDAC9-217ENST00000455069 LIN54Q6MZP7 749 aa8.86□□□□□ -0.99
HDAC9-217ENST00000455069 ETV3LQ6ZN32 361 aa8.86□□□□□ -0.99
HDAC9-217ENST00000455069 CLVS1Q8IUQ0 354 aaPredicted RBP8.86□□□□□ -0.99
HDAC9-217ENST00000455069 BVESQ8NE79 360 aa8.86□□□□□ -0.99
HDAC9-217ENST00000455069 ACOT12Q8WYK0 555 aa8.86□□□□□ -0.99
HDAC9-217ENST00000455069 CMTM3Q96MX0 182 aa8.86□□□□□ -0.99
HDAC9-217ENST00000455069 RNF5Q99942 180 aa8.86□□□□□ -0.99
HDAC9-217ENST00000455069 OR51J1Q9H342 316 aa8.86□□□□□ -0.99
HDAC9-217ENST00000455069 KIAA1456Q9P272 454 aa8.86□□□□□ -0.99
HDAC9-217ENST00000455069 SRRM4A7MD48 611 aaKnown RBP8.85□□□□□ -0.99
HDAC9-217ENST00000455069 SLC25A17O43808 307 aa8.85□□□□□ -0.99
HDAC9-217ENST00000455069 SPDEFO95238 335 aa8.85□□□□□ -0.99
HDAC9-217ENST00000455069 IGHG4P01861 327 aa8.85□□□□□ -0.99
HDAC9-217ENST00000455069 RPLP1P05386 114 aaKnown RBP8.85□□□□□ -0.99
HDAC9-217ENST00000455069 CRYGBP07316 175 aa8.85□□□□□ -0.99
HDAC9-217ENST00000455069 OR5H8P0DN80 308 aa8.85□□□□□ -0.99
HDAC9-217ENST00000455069 ZNF182P17025 639 aaPredicted RBP8.85□□□□□ -0.99
HDAC9-217ENST00000455069 NAT1P18440 290 aa8.85□□□□□ -0.99
HDAC9-217ENST00000455069 FCGR2CP31995 323 aa8.85□□□□□ -0.99
HDAC9-217ENST00000455069 CBX5P45973 191 aa8.85□□□□□ -0.99
HDAC9-217ENST00000455069 RPL5P46777 297 aaKnown RBP8.85□□□□□ -0.99
HDAC9-217ENST00000455069 LUMP51884 338 aaPredicted RBP8.85□□□□□ -0.99
HDAC9-217ENST00000455069 RPS16P62249 146 aaKnown RBP8.85□□□□□ -0.99
HDAC9-217ENST00000455069 RPL30P62888 115 aaKnown RBP8.85□□□□□ -0.99
HDAC9-217ENST00000455069 CX3CL1P78423 397 aa8.85□□□□□ -0.99
HDAC9-217ENST00000455069 MRGPRG-AS1Q2M3A8 158 aa8.85□□□□□ -0.99
HDAC9-217ENST00000455069 TMEM177Q53S58 311 aa8.85□□□□□ -0.99
HDAC9-217ENST00000455069 ZNF660Q6AZW8 331 aaPredicted RBP8.85□□□□□ -0.99
HDAC9-217ENST00000455069 RNF152Q8N8N0 203 aa8.85□□□□□ -0.99
HDAC9-217ENST00000455069 OR4F17Q8NGA8 305 aa8.85□□□□□ -0.99
HDAC9-217ENST00000455069 OR5AP2Q8NGF4 316 aa8.85□□□□□ -0.99
HDAC9-217ENST00000455069 GPX8Q8TED1 209 aa8.85□□□□□ -0.99
HDAC9-217ENST00000455069 FLYWCH2Q96CP2 140 aaKnown RBP8.85□□□□□ -0.99
HDAC9-217ENST00000455069 OR4F4Q96R69 305 aa8.85□□□□□ -0.99
HDAC9-217ENST00000455069 GPHA2Q96T91 129 aa8.85□□□□□ -0.99
HDAC9-217ENST00000455069 MIXL1Q9H2W2 232 aa8.85□□□□□ -0.99
HDAC9-217ENST00000455069 PARP11Q9NR21 331 aa8.85□□□□□ -0.99
HDAC9-217ENST00000455069 NECAP2Q9NVZ3 263 aa8.85□□□□□ -0.99
HDAC9-217ENST00000455069 METTL1Q9UBP6 276 aaKnown RBP8.85□□□□□ -0.99
HDAC9-217ENST00000455069 RBMX2Q9Y388 322 aaKnown RBP8.85□□□□□ -0.99
HDAC9-217ENST00000455069 WSB1Q9Y6I7 421 aa8.85□□□□□ -0.99
HDAC9-217ENST00000455069 SOX15O60248 233 aa8.84□□□□□ -0.99
HDAC9-217ENST00000455069 CA2P00918 260 aa8.84□□□□□ -0.99
HDAC9-217ENST00000455069 PPYP01298 95 aa8.84□□□□□ -0.99
HDAC9-217ENST00000455069 PSMB8P28062 276 aa8.84□□□□□ -0.99
HDAC9-217ENST00000455069 CRIP2P52943 208 aaPredicted RBP8.84□□□□□ -0.99
HDAC9-217ENST00000455069 BRWD1-AS2P59051 145 aa8.84□□□□□ -0.99
HDAC9-217ENST00000455069 SLC35B1P78383 322 aa8.84□□□□□ -0.99
HDAC9-217ENST00000455069 FOXE3Q13461 319 aa8.84□□□□□ -0.99
HDAC9-217ENST00000455069 TEX38Q6PEX7 206 aa8.84□□□□□ -0.99
HDAC9-217ENST00000455069 OVCH2Q7RTZ1 564 aa8.84□□□□□ -0.99
HDAC9-217ENST00000455069 C1QL4Q86Z23 238 aa8.84□□□□□ -0.99
HDAC9-217ENST00000455069 SNX29P2Q8IUI4 249 aa8.84□□□□□ -0.99
HDAC9-217ENST00000455069 COMMD1Q8N668 190 aa8.84□□□□□ -0.99
HDAC9-217ENST00000455069 DYNC2LI1Q8TCX1 351 aa8.84□□□□□ -0.99
HDAC9-217ENST00000455069 MYOZ3Q8TDC0 251 aa8.84□□□□□ -0.99
HDAC9-217ENST00000455069 RAB2BQ8WUD1 216 aa8.84□□□□□ -0.99
HDAC9-217ENST00000455069 HARBI1Q96MB7 349 aa8.84□□□□□ -0.99
HDAC9-217ENST00000455069 CLCC1Q96S66 551 aa8.84□□□□□ -0.99
HDAC9-217ENST00000455069 TSNAXQ99598 290 aaKnown RBP8.84□□□□□ -0.99
HDAC9-217ENST00000455069 FAM103A1Q9BTL3 118 aaKnown RBP8.84□□□□□ -0.99
HDAC9-217ENST00000455069 IFT46Q9NQC8 304 aa8.84□□□□□ -0.99
HDAC9-217ENST00000455069 MRPS7Q9Y2R9 242 aaKnown RBP8.84□□□□□ -0.99
HDAC9-217ENST00000455069 G3V4G9 280 aa8.83□□□□□ -1
HDAC9-217ENST00000455069 H3BMQ9 156 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms