RNA–Protein interactions for RNA: ENST00000452483.1

HMGB3P21-201, Transcript of high mobility group box 3 pseudogene 21, humanhuman

BASIC

Gene HMGB3P21, Length 547 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P21-201ENST00000452483 ORAOV1Q8WV07 137 aa3.33□□□□□ -1.88
HMGB3P21-201ENST00000452483 SLC7A6Q92536 515 aa3.33□□□□□ -1.88
HMGB3P21-201ENST00000452483 FRZBQ92765 325 aa3.33□□□□□ -1.88
HMGB3P21-201ENST00000452483 ZNF524Q96C55 264 aa3.33□□□□□ -1.88
HMGB3P21-201ENST00000452483 ISOC1Q96CN7 298 aa3.33□□□□□ -1.88
HMGB3P21-201ENST00000452483 ADAT3Q96EY9 351 aaPredicted RBP3.33□□□□□ -1.88
HMGB3P21-201ENST00000452483 PHYHIPLQ96FC7 376 aa3.33□□□□□ -1.88
HMGB3P21-201ENST00000452483 ATOH8Q96SQ7 321 aa3.33□□□□□ -1.88
HMGB3P21-201ENST00000452483 HSD17B10Q99714 261 aaKnown RBP3.33□□□□□ -1.88
HMGB3P21-201ENST00000452483 LINC00470Q9BZP3 86 aa3.33□□□□□ -1.88
HMGB3P21-201ENST00000452483 OR2H1Q9GZK4 316 aa3.33□□□□□ -1.88
HMGB3P21-201ENST00000452483 LPAR5Q9H1C0 372 aa3.33□□□□□ -1.88
HMGB3P21-201ENST00000452483 ZNF702PQ9H963 129 aa3.33□□□□□ -1.88
HMGB3P21-201ENST00000452483 RPS6KB2Q9UBS0 482 aa3.33□□□□□ -1.88
HMGB3P21-201ENST00000452483 LAMTOR3Q9UHA4 124 aa3.33□□□□□ -1.88
HMGB3P21-201ENST00000452483 ERG28Q9UKR5 140 aa3.33□□□□□ -1.88
HMGB3P21-201ENST00000452483 TBX21Q9UL17 535 aa3.33□□□□□ -1.88
HMGB3P21-201ENST00000452483 LAMTOR2Q9Y2Q5 125 aa3.33□□□□□ -1.88
HMGB3P21-201ENST00000452483 NFASCO94856 1347 aa3.33□□□□□ -1.88
HMGB3P21-201ENST00000452483 ROBO3Q96MS0 1386 aa3.33□□□□□ -1.88
HMGB3P21-201ENST00000452483 MED23Q9ULK4 1368 aa3.33□□□□□ -1.88
HMGB3P21-201ENST00000452483 BCL9O00512 1426 aa3.33□□□□□ -1.88
HMGB3P21-201ENST00000452483 FGD6Q6ZV73 1430 aa3.33□□□□□ -1.88
HMGB3P21-201ENST00000452483 CACNA1SQ13698 1873 aa3.33□□□□□ -1.88
HMGB3P21-201ENST00000452483 IGHV1-69-2A0A0G2JMI3 117 aa3.32□□□□□ -1.88
HMGB3P21-201ENST00000452483 C9JAW5 83 aa3.32□□□□□ -1.88
HMGB3P21-201ENST00000452483 SOCS2O14508 198 aa3.32□□□□□ -1.88
HMGB3P21-201ENST00000452483 GSTZ1O43708 216 aaPredicted RBP3.32□□□□□ -1.88
HMGB3P21-201ENST00000452483 SRSF10O75494 262 aaKnown RBP3.32□□□□□ -1.88
HMGB3P21-201ENST00000452483 DEDDO75618 318 aa3.32□□□□□ -1.88
HMGB3P21-201ENST00000452483 GABARAPO95166 117 aa3.32□□□□□ -1.88
HMGB3P21-201ENST00000452483 OR2H2O95918 312 aa3.32□□□□□ -1.88
HMGB3P21-201ENST00000452483 HLA-DQB2P05538 268 aa3.32□□□□□ -1.88
HMGB3P21-201ENST00000452483 IGKV2-30P06310 120 aa3.32□□□□□ -1.88
HMGB3P21-201ENST00000452483 RPS4Y1P22090 263 aaKnown RBP3.32□□□□□ -1.88
HMGB3P21-201ENST00000452483 GATA2P23769 480 aaPredicted RBP3.32□□□□□ -1.88
HMGB3P21-201ENST00000452483 IL3RAP26951 378 aa3.32□□□□□ -1.88
HMGB3P21-201ENST00000452483 OR10J1P30954 320 aa3.32□□□□□ -1.88
HMGB3P21-201ENST00000452483 GABRA2P47869 451 aa3.32□□□□□ -1.88
HMGB3P21-201ENST00000452483 INPP1P49441 399 aa3.32□□□□□ -1.88
HMGB3P21-201ENST00000452483 PPP1CAP62136 330 aa3.32□□□□□ -1.88
HMGB3P21-201ENST00000452483 EGFEM1PQ0D2K5 195 aa3.32□□□□□ -1.88
HMGB3P21-201ENST00000452483 OR8G1Q15617 311 aa3.32□□□□□ -1.88
HMGB3P21-201ENST00000452483 TIMM50Q3ZCQ8 353 aa3.32□□□□□ -1.88
HMGB3P21-201ENST00000452483 OCIAD2Q56VL3 154 aa3.32□□□□□ -1.88
HMGB3P21-201ENST00000452483 LYRM7Q5U5X0 104 aa3.32□□□□□ -1.88
HMGB3P21-201ENST00000452483 SCIMPQ6UWF3 145 aa3.32□□□□□ -1.88
HMGB3P21-201ENST00000452483 C2orf66Q6UXQ4 117 aa3.32□□□□□ -1.88
HMGB3P21-201ENST00000452483 MOB1BQ7L9L4 216 aa3.32□□□□□ -1.88
HMGB3P21-201ENST00000452483 DEFB128Q7Z7B8 93 aa3.32□□□□□ -1.88
HMGB3P21-201ENST00000452483 OR8I2Q8N0Y5 310 aa3.32□□□□□ -1.88
HMGB3P21-201ENST00000452483 OR1J4Q8NGS1 313 aa3.32□□□□□ -1.88
HMGB3P21-201ENST00000452483 NEUROG1Q92886 237 aa3.32□□□□□ -1.88
HMGB3P21-201ENST00000452483 SMIM14Q96QK8 99 aa3.32□□□□□ -1.88
HMGB3P21-201ENST00000452483 TIMM17AQ99595 171 aa3.32□□□□□ -1.88
HMGB3P21-201ENST00000452483 NDFIP1Q9BT67 221 aa3.32□□□□□ -1.88
HMGB3P21-201ENST00000452483 C1QTNF4Q9BXJ3 329 aa3.32□□□□□ -1.88
HMGB3P21-201ENST00000452483 GTSF1LQ9H1H1 148 aa3.32□□□□□ -1.88
HMGB3P21-201ENST00000452483 DHRS4-AS1Q9P1J3 65 aa3.32□□□□□ -1.88
HMGB3P21-201ENST00000452483 HIGD1AQ9Y241 93 aa3.32□□□□□ -1.88
HMGB3P21-201ENST00000452483 NEUROG3Q9Y4Z2 214 aa3.32□□□□□ -1.88
HMGB3P21-201ENST00000452483 ZNF706Q9Y5V0 76 aaPredicted RBP3.32□□□□□ -1.88
HMGB3P21-201ENST00000452483 FAM135BQ49AJ0 1406 aa3.32□□□□□ -1.88
HMGB3P21-201ENST00000452483 UHRF1BP1LA0JNW5 1464 aa3.32□□□□□ -1.88
HMGB3P21-201ENST00000452483 EIF4G3O43432 1585 aaKnown RBP3.32□□□□□ -1.88
HMGB3P21-201ENST00000452483 WDR97A6NE52 1622 aa3.32□□□□□ -1.88
HMGB3P21-201ENST00000452483 ZCCHC11Q5TAX3 1644 aaKnown RBP3.32□□□□□ -1.88
HMGB3P21-201ENST00000452483 ITGB4P16144 1822 aa3.32□□□□□ -1.88
HMGB3P21-201ENST00000452483 DYSFO75923 2080 aa3.32□□□□□ -1.88
HMGB3P21-201ENST00000452483 KMT2EQ8IZD2 1858 aa3.31□□□□□ -1.88
HMGB3P21-201ENST00000452483 SETD1AO15047 1707 aaKnown RBP3.31□□□□□ -1.88
HMGB3P21-201ENST00000452483 VPS8Q8N3P4 1428 aa3.31□□□□□ -1.88
HMGB3P21-201ENST00000452483 TRBV19A0A075B6N1 114 aa3.31□□□□□ -1.88
HMGB3P21-201ENST00000452483 A0A087WUU8 490 aa3.31□□□□□ -1.88
HMGB3P21-201ENST00000452483 TRAV4A0A0B4J268 109 aa3.31□□□□□ -1.88
HMGB3P21-201ENST00000452483 CCL15-CCL14A0A0B4J2E2 113 aa3.31□□□□□ -1.88
HMGB3P21-201ENST00000452483 LOC102725191A0A1B0GVB3 256 aa3.31□□□□□ -1.88
HMGB3P21-201ENST00000452483 A8MXK9 166 aa3.31□□□□□ -1.88
HMGB3P21-201ENST00000452483 C4orf51C9J302 202 aa3.31□□□□□ -1.88
HMGB3P21-201ENST00000452483 TMEM250H0YL14 139 aa3.31□□□□□ -1.88
HMGB3P21-201ENST00000452483 M0R381 172 aa3.31□□□□□ -1.88
HMGB3P21-201ENST00000452483 HLA-DPB1P04440 258 aa3.31□□□□□ -1.88
HMGB3P21-201ENST00000452483 ZSCAN5DPP0CG00 497 aa3.31□□□□□ -1.88
HMGB3P21-201ENST00000452483 IMPA1P29218 277 aa3.31□□□□□ -1.88
HMGB3P21-201ENST00000452483 SRIP30626 198 aa3.31□□□□□ -1.88
HMGB3P21-201ENST00000452483 EVX1P49640 407 aa3.31□□□□□ -1.88
HMGB3P21-201ENST00000452483 DSCR9P59020 149 aa3.31□□□□□ -1.88
HMGB3P21-201ENST00000452483 PSG9Q00887 426 aa3.31□□□□□ -1.88
HMGB3P21-201ENST00000452483 LY6DQ14210 128 aa3.31□□□□□ -1.88
HMGB3P21-201ENST00000452483 CST6Q15828 149 aa3.31□□□□□ -1.88
HMGB3P21-201ENST00000452483 ADAMTSL4-AS1Q5T5F5 129 aa3.31□□□□□ -1.88
HMGB3P21-201ENST00000452483 HES3Q5TGS1 186 aa3.31□□□□□ -1.88
HMGB3P21-201ENST00000452483 AWAT2Q6E213 333 aa3.31□□□□□ -1.88
HMGB3P21-201ENST00000452483 RASL11AQ6T310 242 aa3.31□□□□□ -1.88
HMGB3P21-201ENST00000452483 BAP18Q8IXM2 172 aa3.31□□□□□ -1.88
HMGB3P21-201ENST00000452483 TCTE3Q8IZS6 198 aa3.31□□□□□ -1.88
HMGB3P21-201ENST00000452483 YIPF7Q8N8F6 280 aa3.31□□□□□ -1.88
HMGB3P21-201ENST00000452483 NUP35Q8NFH5 326 aa3.31□□□□□ -1.88
HMGB3P21-201ENST00000452483 OR4E2Q8NGC2 313 aa3.31□□□□□ -1.88
HMGB3P21-201ENST00000452483 OR5W2Q8NH69 310 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 126.6 ms