RNA–Protein interactions for RNA: ENST00000452182.1

SCN9A-204, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 1 (best)

Gene SCN9A, Length 1,618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-204ENST00000452182 ASAH1Q13510 395 aa9.31□□□□□ -0.92
SCN9A-204ENST00000452182 CMTM1Q8IZ96 169 aa9.31□□□□□ -0.92
SCN9A-204ENST00000452182 OR5AN1Q8NGI8 311 aa9.31□□□□□ -0.92
SCN9A-204ENST00000452182 OR5R1Q8NH85 324 aa9.31□□□□□ -0.92
SCN9A-204ENST00000452182 PIFOQ8TCI5 191 aa9.31□□□□□ -0.92
SCN9A-204ENST00000452182 ZNF418Q8TF45 676 aaPredicted RBP9.31□□□□□ -0.92
SCN9A-204ENST00000452182 SSMEM1Q8WWF3 244 aa9.31□□□□□ -0.92
SCN9A-204ENST00000452182 SCGB3A2Q96PL1 93 aa9.31□□□□□ -0.92
SCN9A-204ENST00000452182 HSD17B10Q99714 261 aaKnown RBP9.31□□□□□ -0.92
SCN9A-204ENST00000452182 SSX3Q99909 188 aa9.31□□□□□ -0.92
SCN9A-204ENST00000452182 SLC25A21Q9BQT8 299 aaPredicted RBP9.31□□□□□ -0.92
SCN9A-204ENST00000452182 MRPL20Q9BYC9 149 aaKnown RBP9.31□□□□□ -0.92
SCN9A-204ENST00000452182 TEP1Q99973 2627 aaKnown RBP9.31□□□□□ -0.92
SCN9A-204ENST00000452182 CLDN34H7C241 214 aa9.31□□□□□ -0.92
SCN9A-204ENST00000452182 BTCP35070 178 aa9.31□□□□□ -0.92
SCN9A-204ENST00000452182 THBS3P49746 956 aa9.31□□□□□ -0.92
SCN9A-204ENST00000452182 HILS1P60008 231 aa9.31□□□□□ -0.92
SCN9A-204ENST00000452182 EBI3Q14213 229 aa9.31□□□□□ -0.92
SCN9A-204ENST00000452182 MOB3BQ86TA1 216 aa9.31□□□□□ -0.92
SCN9A-204ENST00000452182 ZNF383Q8NA42 475 aa9.31□□□□□ -0.92
SCN9A-204ENST00000452182 ZFAND1Q8TCF1 268 aa9.31□□□□□ -0.92
SCN9A-204ENST00000452182 MARCH1Q8TCQ1 289 aa9.31□□□□□ -0.92
SCN9A-204ENST00000452182 DDB2Q92466 427 aa9.31□□□□□ -0.92
SCN9A-204ENST00000452182 PALMDQ9NP74 551 aa9.31□□□□□ -0.92
SCN9A-204ENST00000452182 TBC1D24Q9ULP9 559 aa9.31□□□□□ -0.92
SCN9A-204ENST00000452182 GPR132Q9UNW8 380 aa9.31□□□□□ -0.92
SCN9A-204ENST00000452182 NIPBLQ6KC79 2804 aaeCLIP9.3□□□□□ -0.92
SCN9A-204ENST00000452182 LINC00854A0A1B0GVQ3 168 aa9.3□□□□□ -0.92
SCN9A-204ENST00000452182 H0YJW9 148 aa9.3□□□□□ -0.92
SCN9A-204ENST00000452182 PGLYRP1O75594 196 aaPredicted RBP9.3□□□□□ -0.92
SCN9A-204ENST00000452182 CTSDP07339 412 aaPredicted RBP9.3□□□□□ -0.92
SCN9A-204ENST00000452182 FAM106CPP0CH98 169 aa9.3□□□□□ -0.92
SCN9A-204ENST00000452182 S100GP29377 79 aa9.3□□□□□ -0.92
SCN9A-204ENST00000452182 RND3P61587 244 aa9.3□□□□□ -0.92
SCN9A-204ENST00000452182 RBMS2Q15434 407 aaKnown RBP9.3□□□□□ -0.92
SCN9A-204ENST00000452182 DRAXINQ8NBI3 349 aaPredicted RBP9.3□□□□□ -0.92
SCN9A-204ENST00000452182 JMJD8Q96S16 334 aa9.3□□□□□ -0.92
SCN9A-204ENST00000452182 SLC2A9Q9NRM0 540 aa9.3□□□□□ -0.92
SCN9A-204ENST00000452182 TCF19Q9Y242 345 aa9.3□□□□□ -0.92
SCN9A-204ENST00000452182 BTBD17A6NE02 478 aa9.29□□□□□ -0.92
SCN9A-204ENST00000452182 LINC00473A8K010 186 aa9.29□□□□□ -0.92
SCN9A-204ENST00000452182 H3BUX3 64 aa9.29□□□□□ -0.92
SCN9A-204ENST00000452182 HOXA3O43365 443 aaPredicted RBP9.29□□□□□ -0.92
SCN9A-204ENST00000452182 VENTXO95231 258 aa9.29□□□□□ -0.92
SCN9A-204ENST00000452182 IGHV4-59P01825 116 aa9.29□□□□□ -0.92
SCN9A-204ENST00000452182 RRASP10301 218 aa9.29□□□□□ -0.92
SCN9A-204ENST00000452182 PGAM2P15259 253 aa9.29□□□□□ -0.92
SCN9A-204ENST00000452182 SLC6A1P30531 599 aa9.29□□□□□ -0.92
SCN9A-204ENST00000452182 RAB13P51153 203 aa9.29□□□□□ -0.92
SCN9A-204ENST00000452182 DEFA1P59665 94 aa9.29□□□□□ -0.92
SCN9A-204ENST00000452182 DEFA3P59666 94 aa9.29□□□□□ -0.92
SCN9A-204ENST00000452182 BAMBIQ13145 260 aa9.29□□□□□ -0.92
SCN9A-204ENST00000452182 CATR1Q13166 79 aa9.29□□□□□ -0.92
SCN9A-204ENST00000452182 MZT2BQ6NZ67 158 aa9.29□□□□□ -0.92
SCN9A-204ENST00000452182 C16orf87Q6PH81 154 aa9.29□□□□□ -0.92
SCN9A-204ENST00000452182 KCTD9Q7L273 389 aa9.29□□□□□ -0.92
SCN9A-204ENST00000452182 PDPNQ86YL7 162 aa9.29□□□□□ -0.92
SCN9A-204ENST00000452182 ZDHHC22Q8N966 263 aa9.29□□□□□ -0.92
SCN9A-204ENST00000452182 C5orf66Q9H5L9 145 aa9.29□□□□□ -0.92
SCN9A-204ENST00000452182 PITPNC1Q9UKF7 332 aa9.29□□□□□ -0.92
SCN9A-204ENST00000452182 VPREB3Q9UKI3 123 aa9.29□□□□□ -0.92
SCN9A-204ENST00000452182 PRELID3BQ9Y3B1 194 aa9.29□□□□□ -0.92
SCN9A-204ENST00000452182 WASHC3Q9Y3C0 194 aa9.29□□□□□ -0.92
SCN9A-204ENST00000452182 RNF212BA8MTL3 300 aa9.28□□□□□ -0.92
SCN9A-204ENST00000452182 NDUFB6O95139 128 aa9.28□□□□□ -0.92
SCN9A-204ENST00000452182 APOA2P02652 100 aa9.28□□□□□ -0.92
SCN9A-204ENST00000452182 SNRNP70P08621 437 aaKnown RBP9.28□□□□□ -0.92
SCN9A-204ENST00000452182 CCR6P51684 374 aa9.28□□□□□ -0.92
SCN9A-204ENST00000452182 LINC00205P59089 165 aa9.28□□□□□ -0.92
SCN9A-204ENST00000452182 RPL30P62888 115 aaKnown RBP9.28□□□□□ -0.92
SCN9A-204ENST00000452182 SLC9A3R2Q15599 337 aa9.28□□□□□ -0.92
SCN9A-204ENST00000452182 ABCA11PQ4W5N1 156 aa9.28□□□□□ -0.92
SCN9A-204ENST00000452182 GLDNQ6ZMI3 551 aaPredicted RBP9.28□□□□□ -0.92
SCN9A-204ENST00000452182 Q8N6K4 173 aa9.28□□□□□ -0.92
SCN9A-204ENST00000452182 TCTEX1D1Q8N7M0 179 aa9.28□□□□□ -0.92
SCN9A-204ENST00000452182 OR2T10Q8NGZ9 312 aa9.28□□□□□ -0.92
SCN9A-204ENST00000452182 CAPSLQ8WWF8 208 aa9.28□□□□□ -0.92
SCN9A-204ENST00000452182 RNF5Q99942 180 aa9.28□□□□□ -0.92
SCN9A-204ENST00000452182 RTBDNQ9BSG5 229 aaPredicted RBP9.28□□□□□ -0.92
SCN9A-204ENST00000452182 FAM212BQ9NTI7 297 aaPredicted RBP9.28□□□□□ -0.92
SCN9A-204ENST00000452182 COPZ2Q9P299 210 aa9.28□□□□□ -0.92
SCN9A-204ENST00000452182 C14orf166Q9Y224 244 aaKnown RBP9.28□□□□□ -0.92
SCN9A-204ENST00000452182 IGHV3-72A0A0B4J1Y9 119 aa9.27□□□□□ -0.92
SCN9A-204ENST00000452182 A6NDX4 124 aa9.27□□□□□ -0.92
SCN9A-204ENST00000452182 DNAJC9-AS1A6NH13 148 aa9.27□□□□□ -0.92
SCN9A-204ENST00000452182 MPPED1O15442 326 aa9.27□□□□□ -0.92
SCN9A-204ENST00000452182 RBFOX2O43251 390 aaKnown RBP eCLIP9.27□□□□□ -0.92
SCN9A-204ENST00000452182 TNFSF12O43508 249 aa9.27□□□□□ -0.92
SCN9A-204ENST00000452182 TCF21O43680 179 aa9.27□□□□□ -0.92
SCN9A-204ENST00000452182 MOSP00540 346 aa9.27□□□□□ -0.92
SCN9A-204ENST00000452182 IFNA2P01563 188 aa9.27□□□□□ -0.92
SCN9A-204ENST00000452182 IGKV1D-33P01593 117 aa9.27□□□□□ -0.92
SCN9A-204ENST00000452182 IGKV1-33P01594 117 aa9.27□□□□□ -0.92
SCN9A-204ENST00000452182 F2RP25116 425 aa9.27□□□□□ -0.92
SCN9A-204ENST00000452182 KIR2DS2P43631 304 aa9.27□□□□□ -0.92
SCN9A-204ENST00000452182 PIGPP57054 158 aa9.27□□□□□ -0.92
SCN9A-204ENST00000452182 RTL8BQ17RB0 113 aa9.27□□□□□ -0.92
SCN9A-204ENST00000452182 PHLDA2Q53GA4 152 aa9.27□□□□□ -0.92
SCN9A-204ENST00000452182 DHRS7BQ6IAN0 325 aaPredicted RBP9.27□□□□□ -0.92
SCN9A-204ENST00000452182 C16orf82Q7Z2V1 217 aa9.27□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 102 ms