RNA–Protein interactions for RNA: ENST00000451859.5

RFX3-209, Transcript of regulatory factor X3, humanhuman

TSL 3

Gene RFX3, Length 740 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-209ENST00000451859 CA2P00918 260 aa6.75□□□□□ -1.33
RFX3-209ENST00000451859 APOA2P02652 100 aa6.75□□□□□ -1.33
RFX3-209ENST00000451859 FCGR3AP08637 254 aa6.75□□□□□ -1.33
RFX3-209ENST00000451859 OR8U9P0C7N5 309 aa6.75□□□□□ -1.33
RFX3-209ENST00000451859 GSTT2P0CG29 244 aa6.75□□□□□ -1.33
RFX3-209ENST00000451859 GSTT2BP0CG30 244 aa6.75□□□□□ -1.33
RFX3-209ENST00000451859 MC5RP33032 325 aa6.75□□□□□ -1.33
RFX3-209ENST00000451859 ECI1P42126 302 aa6.75□□□□□ -1.33
RFX3-209ENST00000451859 GABARAPL2P60520 117 aa6.75□□□□□ -1.33
RFX3-209ENST00000451859 RPS16P62249 146 aaKnown RBP6.75□□□□□ -1.33
RFX3-209ENST00000451859 GNB1P62873 340 aa6.75□□□□□ -1.33
RFX3-209ENST00000451859 CX3CL1P78423 397 aa6.75□□□□□ -1.33
RFX3-209ENST00000451859 DGCR2P98153 550 aa6.75□□□□□ -1.33
RFX3-209ENST00000451859 CD69Q07108 199 aa6.75□□□□□ -1.33
RFX3-209ENST00000451859 C9orf66Q5T8R8 295 aa6.75□□□□□ -1.33
RFX3-209ENST00000451859 UNQ5815/PRO19632Q6UWF5 114 aa6.75□□□□□ -1.33
RFX3-209ENST00000451859 PPP1R27Q86WC6 154 aa6.75□□□□□ -1.33
RFX3-209ENST00000451859 ZNF383Q8NA42 475 aa6.75□□□□□ -1.33
RFX3-209ENST00000451859 OR10R2Q8NGX6 335 aa6.75□□□□□ -1.33
RFX3-209ENST00000451859 GRPEL2Q8TAA5 225 aa6.75□□□□□ -1.33
RFX3-209ENST00000451859 MS4A10Q96PG2 267 aa6.75□□□□□ -1.33
RFX3-209ENST00000451859 AGMATQ9BSE5 352 aa6.75□□□□□ -1.33
RFX3-209ENST00000451859 ATG5Q9H1Y0 275 aa6.75□□□□□ -1.33
RFX3-209ENST00000451859 OR2D2Q9H210 308 aa6.75□□□□□ -1.33
RFX3-209ENST00000451859 METTL1Q9UBP6 276 aaKnown RBP6.75□□□□□ -1.33
RFX3-209ENST00000451859 FOXA2Q9Y261 457 aaPredicted RBP6.75□□□□□ -1.33
RFX3-209ENST00000451859 VSIG4Q9Y279 399 aa6.75□□□□□ -1.33
RFX3-209ENST00000451859 RBM7Q9Y580 266 aaKnown RBP6.75□□□□□ -1.33
RFX3-209ENST00000451859 MFNGO00587 321 aa6.74□□□□□ -1.33
RFX3-209ENST00000451859 ITGB1BP1O14713 200 aa6.74□□□□□ -1.33
RFX3-209ENST00000451859 SLC25A17O43808 307 aa6.74□□□□□ -1.33
RFX3-209ENST00000451859 SOX15O60248 233 aa6.74□□□□□ -1.33
RFX3-209ENST00000451859 PROP1O75360 226 aa6.74□□□□□ -1.33
RFX3-209ENST00000451859 LY86O95711 162 aa6.74□□□□□ -1.33
RFX3-209ENST00000451859 IGHV3-11P01762 117 aa6.74□□□□□ -1.33
RFX3-209ENST00000451859 IGKV1-16P04430 117 aa6.74□□□□□ -1.33
RFX3-209ENST00000451859 TFAP2AP05549 437 aa6.74□□□□□ -1.33
RFX3-209ENST00000451859 HIST1H1DP16402 221 aaKnown RBP6.74□□□□□ -1.33
RFX3-209ENST00000451859 PPIFP30405 207 aaKnown RBP6.74□□□□□ -1.33
RFX3-209ENST00000451859 TALDO1P37837 337 aa6.74□□□□□ -1.33
RFX3-209ENST00000451859 RANBP1P43487 201 aa6.74□□□□□ -1.33
RFX3-209ENST00000451859 RAB9AP51151 201 aa6.74□□□□□ -1.33
RFX3-209ENST00000451859 SLURP1P55000 103 aa6.74□□□□□ -1.33
RFX3-209ENST00000451859 PSG5Q15238 335 aa6.74□□□□□ -1.33
RFX3-209ENST00000451859 ZNF260Q3ZCT1 412 aa6.74□□□□□ -1.33
RFX3-209ENST00000451859 ASPHD1Q5U4P2 390 aa6.74□□□□□ -1.33
RFX3-209ENST00000451859 ZNF660Q6AZW8 331 aaPredicted RBP6.74□□□□□ -1.33
RFX3-209ENST00000451859 NR2C2APQ86WQ0 139 aa6.74□□□□□ -1.33
RFX3-209ENST00000451859 SPARTQ8N0X7 666 aa6.74□□□□□ -1.33
RFX3-209ENST00000451859 ZNF491Q8N8L2 437 aa6.74□□□□□ -1.33
RFX3-209ENST00000451859 OR5AN1Q8NGI8 311 aa6.74□□□□□ -1.33
RFX3-209ENST00000451859 OR4A4PQ8NGN8 299 aa6.74□□□□□ -1.33
RFX3-209ENST00000451859 OR1N2Q8NGR9 330 aa6.74□□□□□ -1.33
RFX3-209ENST00000451859 OR10J5Q8NHC4 309 aa6.74□□□□□ -1.33
RFX3-209ENST00000451859 UBE2E2Q96LR5 201 aa6.74□□□□□ -1.33
RFX3-209ENST00000451859 TSNAXQ99598 290 aaKnown RBP6.74□□□□□ -1.33
RFX3-209ENST00000451859 GINS4Q9BRT9 223 aa6.74□□□□□ -1.33
RFX3-209ENST00000451859 SLC35D1Q9NTN3 355 aa6.74□□□□□ -1.33
RFX3-209ENST00000451859 ZNF580Q9UK33 172 aa6.74□□□□□ -1.33
RFX3-209ENST00000451859 ELF5Q9UKW6 265 aaPredicted RBP6.74□□□□□ -1.33
RFX3-209ENST00000451859 IGKV1D-8A0A087WSZ0 117 aa6.73□□□□□ -1.33
RFX3-209ENST00000451859 METTL21EPA6NDL7 271 aa6.73□□□□□ -1.33
RFX3-209ENST00000451859 RAB27BO00194 218 aa6.73□□□□□ -1.33
RFX3-209ENST00000451859 RBBP9O75884 186 aa6.73□□□□□ -1.33
RFX3-209ENST00000451859 RAB6AP20340 208 aa6.73□□□□□ -1.33
RFX3-209ENST00000451859 SERPINB10P48595 397 aa6.73□□□□□ -1.33
RFX3-209ENST00000451859 TPPP2P59282 170 aa6.73□□□□□ -1.33
RFX3-209ENST00000451859 MXD1Q05195 221 aa6.73□□□□□ -1.33
RFX3-209ENST00000451859 ZNF616Q08AN1 781 aa6.73□□□□□ -1.33
RFX3-209ENST00000451859 FHL3Q13643 280 aa6.73□□□□□ -1.33
RFX3-209ENST00000451859 KIAA0141Q14154 515 aaPredicted RBP6.73□□□□□ -1.33
RFX3-209ENST00000451859 NEDD8Q15843 81 aa6.73□□□□□ -1.33
RFX3-209ENST00000451859 ACTBL2Q562R1 376 aa6.73□□□□□ -1.33
RFX3-209ENST00000451859 UBE2UQ5VVX9 321 aa6.73□□□□□ -1.33
RFX3-209ENST00000451859 CD200R1LQ6Q8B3 271 aa6.73□□□□□ -1.33
RFX3-209ENST00000451859 MINDY2Q8NBR6 621 aa6.73□□□□□ -1.33
RFX3-209ENST00000451859 BVESQ8NE79 360 aa6.73□□□□□ -1.33
RFX3-209ENST00000451859 LFNGQ8NES3 379 aa6.73□□□□□ -1.33
RFX3-209ENST00000451859 LGALS14Q8TCE9 139 aa6.73□□□□□ -1.33
RFX3-209ENST00000451859 MYOZ3Q8TDC0 251 aa6.73□□□□□ -1.33
RFX3-209ENST00000451859 ARPC1AQ92747 370 aa6.73□□□□□ -1.33
RFX3-209ENST00000451859 PTX4Q96A99 478 aa6.73□□□□□ -1.33
RFX3-209ENST00000451859 C5orf30Q96GV9 206 aa6.73□□□□□ -1.33
RFX3-209ENST00000451859 HARBI1Q96MB7 349 aa6.73□□□□□ -1.33
RFX3-209ENST00000451859 CHCHD6Q9BRQ6 235 aa6.73□□□□□ -1.33
RFX3-209ENST00000451859 OR51E2Q9H255 320 aa6.73□□□□□ -1.33
RFX3-209ENST00000451859 GHITMQ9H3K2 345 aa6.73□□□□□ -1.33
RFX3-209ENST00000451859 Q9H521 79 aa6.73□□□□□ -1.33
RFX3-209ENST00000451859 ZNF355PQ9NSJ1 428 aa6.73□□□□□ -1.33
RFX3-209ENST00000451859 TXNL4BQ9NX01 149 aaKnown RBP6.73□□□□□ -1.33
RFX3-209ENST00000451859 SDHAF2Q9NX18 166 aa6.73□□□□□ -1.33
RFX3-209ENST00000451859 DAPK2Q9UIK4 370 aa6.73□□□□□ -1.33
RFX3-209ENST00000451859 STUB1Q9UNE7 303 aa6.73□□□□□ -1.33
RFX3-209ENST00000451859 RRP15Q9Y3B9 282 aaKnown RBP6.73□□□□□ -1.33
RFX3-209ENST00000451859 IGHV4OR15-8A0A075B7B6 117 aa6.72□□□□□ -1.33
RFX3-209ENST00000451859 A0A087WW49 117 aa6.72□□□□□ -1.33
RFX3-209ENST00000451859 TRBV6-7A0A0A0MS04 114 aa6.72□□□□□ -1.33
RFX3-209ENST00000451859 LOC100506127A0A0U1RQW1 187 aa6.72□□□□□ -1.33
RFX3-209ENST00000451859 TMEM235A6NFC5 223 aa6.72□□□□□ -1.33
RFX3-209ENST00000451859 I3L521 148 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 103.8 ms