RNA–Protein interactions for RNA: ENST00000446996.5

APOE-204, Transcript of apolipoprotein E, humanhuman

TSL 2

Gene APOE, Length 737 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-204ENST00000446996 TBPP20226 339 aa17.46■□□□□ 0.39
APOE-204ENST00000446996 DUTP33316 252 aaKnown RBP17.46■□□□□ 0.39
APOE-204ENST00000446996 S100A5P33763 92 aa17.46■□□□□ 0.39
APOE-204ENST00000446996 IL18Q14116 193 aa17.46■□□□□ 0.39
APOE-204ENST00000446996 GLDNQ6ZMI3 551 aaPredicted RBP17.46■□□□□ 0.39
APOE-204ENST00000446996 FAM71E2Q8N5Q1 922 aa17.46■□□□□ 0.39
APOE-204ENST00000446996 C5orf30Q96GV9 206 aa17.46■□□□□ 0.39
APOE-204ENST00000446996 KLK11Q9UBX7 282 aa17.46■□□□□ 0.39
APOE-204ENST00000446996 IGLV2-14P01704 120 aa17.45■□□□□ 0.38
APOE-204ENST00000446996 HLA-DMAP28067 261 aa17.45■□□□□ 0.38
APOE-204ENST00000446996 HRH1P35367 487 aa17.45■□□□□ 0.38
APOE-204ENST00000446996 VDAC2P45880 294 aaPredicted RBP17.45■□□□□ 0.38
APOE-204ENST00000446996 RFX2P48378 723 aa17.45■□□□□ 0.38
APOE-204ENST00000446996 F2RL1P55085 397 aa17.45■□□□□ 0.38
APOE-204ENST00000446996 VAX1Q5SQQ9 334 aa17.45■□□□□ 0.38
APOE-204ENST00000446996 Q6ZS46 218 aa17.45■□□□□ 0.38
APOE-204ENST00000446996 DRAXINQ8NBI3 349 aaPredicted RBP17.45■□□□□ 0.38
APOE-204ENST00000446996 OR6F1Q8NGZ6 308 aa17.45■□□□□ 0.38
APOE-204ENST00000446996 SMIM4Q8WVI0 70 aa17.45■□□□□ 0.38
APOE-204ENST00000446996 DDB2Q92466 427 aa17.45■□□□□ 0.38
APOE-204ENST00000446996 RASL11BQ9BPW5 248 aa17.45■□□□□ 0.38
APOE-204ENST00000446996 WNT10AQ9GZT5 417 aa17.45■□□□□ 0.38
APOE-204ENST00000446996 SLC35D1Q9NTN3 355 aa17.45■□□□□ 0.38
APOE-204ENST00000446996 SIGLEC9Q9Y336 463 aa17.45■□□□□ 0.38
APOE-204ENST00000446996 FABP12A6NFH5 140 aa17.44■□□□□ 0.38
APOE-204ENST00000446996 H7C2Y5 167 aa17.44■□□□□ 0.38
APOE-204ENST00000446996 NBR2O15453 112 aa17.44■□□□□ 0.38
APOE-204ENST00000446996 GSTZ1O43708 216 aaPredicted RBP17.44■□□□□ 0.38
APOE-204ENST00000446996 IGHG2P01859 326 aa17.44■□□□□ 0.38
APOE-204ENST00000446996 PTBP1P26599 531 aaKnown RBP eCLIP17.44■□□□□ 0.384e-8■■■■■ 47.4
APOE-204ENST00000446996 MMDQ15546 238 aa17.44■□□□□ 0.38
APOE-204ENST00000446996 ARSJQ5FYB0 599 aaPredicted RBP17.44■□□□□ 0.38
APOE-204ENST00000446996 ZNF66Q6ZN08 573 aa17.44■□□□□ 0.38
APOE-204ENST00000446996 TMEM229BQ8NBD8 167 aa17.44■□□□□ 0.38
APOE-204ENST00000446996 MOB3AQ96BX8 217 aa17.44■□□□□ 0.38
APOE-204ENST00000446996 HSD17B10Q99714 261 aaKnown RBP17.44■□□□□ 0.38
APOE-204ENST00000446996 KIAA1456Q9P272 454 aa17.44■□□□□ 0.38
APOE-204ENST00000446996 J3QRK9 145 aa17.43■□□□□ 0.38
APOE-204ENST00000446996 SPDEFO95238 335 aa17.43■□□□□ 0.38
APOE-204ENST00000446996 LGALS7P47929 136 aa17.43■□□□□ 0.38
APOE-204ENST00000446996 HERV-K104P61576 105 aa17.43■□□□□ 0.38
APOE-204ENST00000446996 CBX3Q13185 183 aa17.43■□□□□ 0.38
APOE-204ENST00000446996 EIF4EBP1Q13541 118 aaPredicted RBP17.43■□□□□ 0.38
APOE-204ENST00000446996 FOXB2Q5VYV0 432 aa17.43■□□□□ 0.38
APOE-204ENST00000446996 SECTM1Q8WVN6 248 aa17.43■□□□□ 0.38
APOE-204ENST00000446996 FLYWCH2Q96CP2 140 aaKnown RBP17.43■□□□□ 0.38
APOE-204ENST00000446996 TSNAXQ99598 290 aaKnown RBP17.43■□□□□ 0.38
APOE-204ENST00000446996 CITED1Q99966 193 aa17.43■□□□□ 0.38
APOE-204ENST00000446996 ZNF2Q9BSG1 426 aaPredicted RBP17.43■□□□□ 0.38
APOE-204ENST00000446996 TAS2R8Q9NYW2 309 aa17.43■□□□□ 0.38
APOE-204ENST00000446996 TENM1Q9UKZ4 2725 aa17.43■□□□□ 0.38
APOE-204ENST00000446996 HAX1O00165 279 aa17.42■□□□□ 0.38
APOE-204ENST00000446996 KCNAB3O43448 404 aa17.42■□□□□ 0.38
APOE-204ENST00000446996 CD74P04233 296 aa17.42■□□□□ 0.38
APOE-204ENST00000446996 TAS2R19P59542 299 aa17.42■□□□□ 0.38
APOE-204ENST00000446996 TSPAN5P62079 268 aa17.42■□□□□ 0.38
APOE-204ENST00000446996 DGCR2P98153 550 aa17.42■□□□□ 0.38
APOE-204ENST00000446996 RTL8BQ17RB0 113 aa17.42■□□□□ 0.38
APOE-204ENST00000446996 TMEM177Q53S58 311 aa17.42■□□□□ 0.38
APOE-204ENST00000446996 WIPF2Q8TF74 440 aaPredicted RBP17.42■□□□□ 0.38
APOE-204ENST00000446996 RITA1Q96K30 269 aa17.42■□□□□ 0.38
APOE-204ENST00000446996 SLC5A7Q9GZV3 580 aa17.42■□□□□ 0.38
APOE-204ENST00000446996 CCL28Q9NRJ3 127 aa17.42■□□□□ 0.38
APOE-204ENST00000446996 PRELID3BQ9Y3B1 194 aa17.42■□□□□ 0.38
APOE-204ENST00000446996 LINC00473A8K010 186 aa17.41■□□□□ 0.38
APOE-204ENST00000446996 PEX14O75381 377 aa17.41■□□□□ 0.38
APOE-204ENST00000446996 LINC00205P59089 165 aa17.41■□□□□ 0.38
APOE-204ENST00000446996 RPS16P62249 146 aaKnown RBP17.41■□□□□ 0.38
APOE-204ENST00000446996 C5orf64Q2M2E5 130 aa17.41■□□□□ 0.38
APOE-204ENST00000446996 C9orf152Q5JTZ5 239 aa17.41■□□□□ 0.38
APOE-204ENST00000446996 LPCAT3Q6P1A2 487 aa17.41■□□□□ 0.38
APOE-204ENST00000446996 CCDC190Q86UF4 302 aa17.41■□□□□ 0.38
APOE-204ENST00000446996 TMEM17Q86X19 198 aa17.41■□□□□ 0.38
APOE-204ENST00000446996 ARRDC1Q8N5I2 433 aa17.41■□□□□ 0.38
APOE-204ENST00000446996 KLHDC1Q8N7A1 406 aa17.41■□□□□ 0.38
APOE-204ENST00000446996 ZNF580Q9UK33 172 aa17.41■□□□□ 0.38
APOE-204ENST00000446996 RRHO14718 337 aa17.4■□□□□ 0.38
APOE-204ENST00000446996 HLA-DRB1P01911 266 aa17.4■□□□□ 0.38
APOE-204ENST00000446996 IGKV1-16P04430 117 aa17.4■□□□□ 0.38
APOE-204ENST00000446996 CSF1P09603 554 aa17.4■□□□□ 0.38
APOE-204ENST00000446996 ETV6P41212 452 aa17.4■□□□□ 0.38
APOE-204ENST00000446996 UCP3P55916 312 aa17.4■□□□□ 0.38
APOE-204ENST00000446996 FXYD4P59646 89 aa17.4■□□□□ 0.38
APOE-204ENST00000446996 RNASE12Q5GAN4 147 aaKnown RBP17.4■□□□□ 0.38
APOE-204ENST00000446996 RNASE10Q5GAN6 216 aaKnown RBP17.4■□□□□ 0.38
APOE-204ENST00000446996 SLC35E3Q7Z769 313 aa17.4■□□□□ 0.38
APOE-204ENST00000446996 MFSD4AQ8N468 514 aa17.4■□□□□ 0.38
APOE-204ENST00000446996 BVESQ8NE79 360 aa17.4■□□□□ 0.38
APOE-204ENST00000446996 A6NHS1 94 aa17.39■□□□□ 0.37
APOE-204ENST00000446996 SH2D7A6NKC9 451 aaPredicted RBP17.39■□□□□ 0.37
APOE-204ENST00000446996 CD3DP04234 171 aa17.39■□□□□ 0.37
APOE-204ENST00000446996 IFNA6P05013 189 aa17.39■□□□□ 0.37
APOE-204ENST00000446996 CNTFRP26992 372 aa17.39■□□□□ 0.37
APOE-204ENST00000446996 GNRHRP30968 328 aa17.39■□□□□ 0.37
APOE-204ENST00000446996 KRTAP10-3P60369 221 aa17.39■□□□□ 0.37
APOE-204ENST00000446996 LIN54Q6MZP7 749 aa17.39■□□□□ 0.37
APOE-204ENST00000446996 KCTD9Q7L273 389 aa17.39■□□□□ 0.37
APOE-204ENST00000446996 FOXRED2Q8IWF2 684 aa17.39■□□□□ 0.37
APOE-204ENST00000446996 OR6Q1Q8NGQ2 317 aa17.39■□□□□ 0.37
APOE-204ENST00000446996 OSR1Q8TAX0 266 aaPredicted RBP17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms