RNA–Protein interactions for RNA: ENST00000444532.2

CCDC188-202, Transcript of coiled-coil domain containing 188, humanhuman

TSL 3

Gene CCDC188, Length 628 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-202ENST00000444532 OR2W1Q9Y3N9 320 aa14.61□□□□□ -0.07
CCDC188-202ENST00000444532 NUDT19A8MXV4 375 aa14.6□□□□□ -0.07
CCDC188-202ENST00000444532 ATP6V0E1O15342 81 aa14.6□□□□□ -0.07
CCDC188-202ENST00000444532 SLC22A5O76082 557 aa14.6□□□□□ -0.07
CCDC188-202ENST00000444532 RPLP1P05386 114 aaKnown RBP14.6□□□□□ -0.07
CCDC188-202ENST00000444532 RRASP10301 218 aa14.6□□□□□ -0.07
CCDC188-202ENST00000444532 ALDH3B2P48448 385 aa14.6□□□□□ -0.07
CCDC188-202ENST00000444532 THBS3P49746 956 aa14.6□□□□□ -0.07
CCDC188-202ENST00000444532 LUMP51884 338 aaPredicted RBP14.6□□□□□ -0.07
CCDC188-202ENST00000444532 ZNF695Q8IW36 515 aa14.6□□□□□ -0.07
CCDC188-202ENST00000444532 PARP11Q9NR21 331 aa14.6□□□□□ -0.07
CCDC188-202ENST00000444532 METTL1Q9UBP6 276 aaKnown RBP14.6□□□□□ -0.07
CCDC188-202ENST00000444532 TRAV41A0A0B4J266 112 aa14.59□□□□□ -0.07
CCDC188-202ENST00000444532 FCN1O00602 326 aa14.59□□□□□ -0.07
CCDC188-202ENST00000444532 WIPF1O43516 503 aa14.59□□□□□ -0.07
CCDC188-202ENST00000444532 HLA-DQB1P01920 261 aa14.59□□□□□ -0.07
CCDC188-202ENST00000444532 NFYAP23511 347 aaPredicted RBP14.59□□□□□ -0.07
CCDC188-202ENST00000444532 PSMB8P28062 276 aa14.59□□□□□ -0.07
CCDC188-202ENST00000444532 PPIFP30405 207 aaKnown RBP14.59□□□□□ -0.07
CCDC188-202ENST00000444532 CBX5P45973 191 aa14.59□□□□□ -0.07
CCDC188-202ENST00000444532 CDX1P47902 265 aaPredicted RBP14.59□□□□□ -0.07
CCDC188-202ENST00000444532 LGALS7P47929 136 aa14.59□□□□□ -0.07
CCDC188-202ENST00000444532 CRIP2P52943 208 aaPredicted RBP14.59□□□□□ -0.07
CCDC188-202ENST00000444532 NCS1P62166 190 aa14.59□□□□□ -0.07
CCDC188-202ENST00000444532 CX3CL1P78423 397 aa14.59□□□□□ -0.07
CCDC188-202ENST00000444532 CBX3Q13185 183 aa14.59□□□□□ -0.07
CCDC188-202ENST00000444532 BEAN1Q3B7T3 259 aa14.59□□□□□ -0.07
CCDC188-202ENST00000444532 KPRPQ5T749 579 aaPredicted RBP14.59□□□□□ -0.07
CCDC188-202ENST00000444532 HOGA1Q86XE5 327 aa14.59□□□□□ -0.07
CCDC188-202ENST00000444532 SAMD12Q8N8I0 201 aa14.59□□□□□ -0.07
CCDC188-202ENST00000444532 KLHL30-AS1Q8NEE0 82 aa14.59□□□□□ -0.07
CCDC188-202ENST00000444532 BEST4Q8NFU0 473 aa14.59□□□□□ -0.07
CCDC188-202ENST00000444532 C5orf30Q96GV9 206 aa14.59□□□□□ -0.07
CCDC188-202ENST00000444532 WSB1Q9Y6I7 421 aa14.59□□□□□ -0.07
CCDC188-202ENST00000444532 G3V318 75 aa14.58□□□□□ -0.08
CCDC188-202ENST00000444532 DUTP33316 252 aaKnown RBP14.58□□□□□ -0.08
CCDC188-202ENST00000444532 ARPC4P59998 168 aa14.58□□□□□ -0.08
CCDC188-202ENST00000444532 VBP1P61758 197 aa14.58□□□□□ -0.08
CCDC188-202ENST00000444532 RTL8BQ17RB0 113 aa14.58□□□□□ -0.08
CCDC188-202ENST00000444532 PDLIM3Q53GG5 364 aaPredicted RBP14.58□□□□□ -0.08
CCDC188-202ENST00000444532 OXLD1Q5BKU9 147 aa14.58□□□□□ -0.08
CCDC188-202ENST00000444532 ZNF562Q6V9R5 426 aa14.58□□□□□ -0.08
CCDC188-202ENST00000444532 C8orf86Q6ZUL3 223 aa14.58□□□□□ -0.08
CCDC188-202ENST00000444532 ANKRD13BQ86YJ7 626 aa14.58□□□□□ -0.08
CCDC188-202ENST00000444532 ZNF645Q8N7E2 425 aa14.58□□□□□ -0.08
CCDC188-202ENST00000444532 IGLV1-40P01703 118 aa14.57□□□□□ -0.08
CCDC188-202ENST00000444532 MYCNOSP40205 109 aa14.57□□□□□ -0.08
CCDC188-202ENST00000444532 TMEM267Q0VDI3 215 aaPredicted RBP14.57□□□□□ -0.08
CCDC188-202ENST00000444532 TMEM65Q6PI78 240 aa14.57□□□□□ -0.08
CCDC188-202ENST00000444532 ETV3LQ6ZN32 361 aa14.57□□□□□ -0.08
CCDC188-202ENST00000444532 C18orf65Q6ZTR6 163 aa14.57□□□□□ -0.08
CCDC188-202ENST00000444532 GVQW1Q8N7I0 195 aa14.57□□□□□ -0.08
CCDC188-202ENST00000444532 MINDY2Q8NBR6 621 aa14.57□□□□□ -0.08
CCDC188-202ENST00000444532 BVESQ8NE79 360 aa14.57□□□□□ -0.08
CCDC188-202ENST00000444532 DDB2Q92466 427 aa14.57□□□□□ -0.08
CCDC188-202ENST00000444532 RCC1LQ96I51 464 aaKnown RBP14.57□□□□□ -0.08
CCDC188-202ENST00000444532 CMTM3Q96MX0 182 aa14.57□□□□□ -0.08
CCDC188-202ENST00000444532 J3QRK9 145 aa14.56□□□□□ -0.08
CCDC188-202ENST00000444532 SLC25A17O43808 307 aa14.56□□□□□ -0.08
CCDC188-202ENST00000444532 TUSC2O75896 110 aa14.56□□□□□ -0.08
CCDC188-202ENST00000444532 DUS4LO95620 317 aaKnown RBP14.56□□□□□ -0.08
CCDC188-202ENST00000444532 NDPQ00604 133 aa14.56□□□□□ -0.08
CCDC188-202ENST00000444532 TMEM177Q53S58 311 aa14.56□□□□□ -0.08
CCDC188-202ENST00000444532 TMEM69Q5SWH9 247 aa14.56□□□□□ -0.08
CCDC188-202ENST00000444532 LCNL1Q6ZST4 164 aa14.56□□□□□ -0.08
CCDC188-202ENST00000444532 TCTEX1D1Q8N7M0 179 aa14.56□□□□□ -0.08
CCDC188-202ENST00000444532 LINC00482Q8N8I6 264 aa14.56□□□□□ -0.08
CCDC188-202ENST00000444532 ACOT12Q8WYK0 555 aa14.56□□□□□ -0.08
CCDC188-202ENST00000444532 CLCC1Q96S66 551 aa14.56□□□□□ -0.08
CCDC188-202ENST00000444532 NAA50Q9GZZ1 169 aaKnown RBP14.56□□□□□ -0.08
CCDC188-202ENST00000444532 NECAP2Q9NVZ3 263 aa14.56□□□□□ -0.08
CCDC188-202ENST00000444532 FBXO7Q9Y3I1 522 aa14.56□□□□□ -0.08
CCDC188-202ENST00000444532 NUBP2Q9Y5Y2 271 aa14.56□□□□□ -0.08
CCDC188-202ENST00000444532 LINC00473A8K010 186 aa14.55□□□□□ -0.08
CCDC188-202ENST00000444532 SHOXO15266 292 aa14.55□□□□□ -0.08
CCDC188-202ENST00000444532 GABARAPO95166 117 aa14.55□□□□□ -0.08
CCDC188-202ENST00000444532 IGLV2-23P01705 113 aa14.55□□□□□ -0.08
CCDC188-202ENST00000444532 EGR2P11161 476 aaPredicted RBP14.55□□□□□ -0.08
CCDC188-202ENST00000444532 PTHLHP12272 177 aa14.55□□□□□ -0.08
CCDC188-202ENST00000444532 IGLL1P15814 213 aa14.55□□□□□ -0.08
CCDC188-202ENST00000444532 RORCP51449 518 aa14.55□□□□□ -0.08
CCDC188-202ENST00000444532 AKIRIN2Q53H80 203 aa14.55□□□□□ -0.08
CCDC188-202ENST00000444532 C19orf54Q5BKX5 351 aa14.55□□□□□ -0.08
CCDC188-202ENST00000444532 GPR107Q5VW38 600 aa14.55□□□□□ -0.08
CCDC188-202ENST00000444532 PPP1R27Q86WC6 154 aa14.55□□□□□ -0.08
CCDC188-202ENST00000444532 MRPL41Q8IXM3 137 aaKnown RBP14.55□□□□□ -0.08
CCDC188-202ENST00000444532 MYOZ3Q8TDC0 251 aa14.55□□□□□ -0.08
CCDC188-202ENST00000444532 HARBI1Q96MB7 349 aa14.55□□□□□ -0.08
CCDC188-202ENST00000444532 P2RX4Q99571 388 aa14.55□□□□□ -0.08
CCDC188-202ENST00000444532 COMMD3Q9UBI1 195 aa14.55□□□□□ -0.08
CCDC188-202ENST00000444532 RBMX2Q9Y388 322 aaKnown RBP14.55□□□□□ -0.08
CCDC188-202ENST00000444532 IGKV1D-13A0A0B4J2D9 117 aa14.54□□□□□ -0.08
CCDC188-202ENST00000444532 CCL24O00175 119 aa14.54□□□□□ -0.08
CCDC188-202ENST00000444532 CA2P00918 260 aa14.54□□□□□ -0.08
CCDC188-202ENST00000444532 APOA1P02647 267 aa14.54□□□□□ -0.08
CCDC188-202ENST00000444532 CRYGBP07316 175 aa14.54□□□□□ -0.08
CCDC188-202ENST00000444532 IGKV1-13P0DP09 117 aa14.54□□□□□ -0.08
CCDC188-202ENST00000444532 TAS2R20P59543 309 aa14.54□□□□□ -0.08
CCDC188-202ENST00000444532 CTF1Q16619 201 aa14.54□□□□□ -0.08
CCDC188-202ENST00000444532 ECSCRQ19T08 205 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms