RNA–Protein interactions for RNA: ENST00000444508.5

SMARCAL1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 2

Gene SMARCAL1, Length 711 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-209ENST00000444508 IGKV1D-13A0A0B4J2D9 117 aa13.8□□□□□ -0.2
SMARCAL1-209ENST00000444508 PSMB11A5LHX3 300 aa13.8□□□□□ -0.2
SMARCAL1-209ENST00000444508 AP4M1O00189 453 aa13.8□□□□□ -0.2
SMARCAL1-209ENST00000444508 SULT1C2O00338 296 aa13.8□□□□□ -0.2
SMARCAL1-209ENST00000444508 TPPPO94811 219 aa13.8□□□□□ -0.2
SMARCAL1-209ENST00000444508 NDUFA3O95167 84 aa13.8□□□□□ -0.2
SMARCAL1-209ENST00000444508 IGKV1-13P0DP09 117 aa13.8□□□□□ -0.2
SMARCAL1-209ENST00000444508 RRASP10301 218 aa13.8□□□□□ -0.2
SMARCAL1-209ENST00000444508 NAT1P18440 290 aa13.8□□□□□ -0.2
SMARCAL1-209ENST00000444508 AADACP22760 399 aa13.8□□□□□ -0.2
SMARCAL1-209ENST00000444508 DUTP33316 252 aaKnown RBP13.8□□□□□ -0.2
SMARCAL1-209ENST00000444508 RPS16P62249 146 aaKnown RBP13.8□□□□□ -0.2
SMARCAL1-209ENST00000444508 SLC35B1P78383 322 aa13.8□□□□□ -0.2
SMARCAL1-209ENST00000444508 RTL8BQ17RB0 113 aa13.8□□□□□ -0.2
SMARCAL1-209ENST00000444508 LIN54Q6MZP7 749 aa13.8□□□□□ -0.2
SMARCAL1-209ENST00000444508 OR4X2Q8NGF9 303 aa13.8□□□□□ -0.2
SMARCAL1-209ENST00000444508 OR5H2Q8NGV7 314 aa13.8□□□□□ -0.2
SMARCAL1-209ENST00000444508 NOL4LQ96MY1 436 aaPredicted RBP13.8□□□□□ -0.2
SMARCAL1-209ENST00000444508 TSNAXQ99598 290 aaKnown RBP13.8□□□□□ -0.2
SMARCAL1-209ENST00000444508 TRRAPQ9Y4A5 3859 aa13.79□□□□□ -0.2
SMARCAL1-209ENST00000444508 CTDSP2O14595 271 aa13.79□□□□□ -0.2
SMARCAL1-209ENST00000444508 RRHO14718 337 aa13.79□□□□□ -0.2
SMARCAL1-209ENST00000444508 PPYP01298 95 aa13.79□□□□□ -0.2
SMARCAL1-209ENST00000444508 HLA-DRB1P01911 266 aa13.79□□□□□ -0.2
SMARCAL1-209ENST00000444508 PMP2P02689 132 aa13.79□□□□□ -0.2
SMARCAL1-209ENST00000444508 IGKV1-16P04430 117 aa13.79□□□□□ -0.2
SMARCAL1-209ENST00000444508 RCVRNP35243 200 aa13.79□□□□□ -0.2
SMARCAL1-209ENST00000444508 LAX1Q8IWV1 398 aa13.79□□□□□ -0.2
SMARCAL1-209ENST00000444508 STPG2Q8N412 459 aa13.79□□□□□ -0.2
SMARCAL1-209ENST00000444508 SECTM1Q8WVN6 248 aa13.79□□□□□ -0.2
SMARCAL1-209ENST00000444508 GIMAP1Q8WWP7 306 aa13.79□□□□□ -0.2
SMARCAL1-209ENST00000444508 HSPB9Q9BQS6 159 aa13.79□□□□□ -0.2
SMARCAL1-209ENST00000444508 GON7Q9BXV9 100 aa13.79□□□□□ -0.2
SMARCAL1-209ENST00000444508 C6orf62Q9GZU0 229 aaPredicted RBP13.79□□□□□ -0.2
SMARCAL1-209ENST00000444508 MIXL1Q9H2W2 232 aa13.79□□□□□ -0.2
SMARCAL1-209ENST00000444508 FBXL15Q9H469 300 aa13.79□□□□□ -0.2
SMARCAL1-209ENST00000444508 LINC00527Q9UJ94 153 aa13.79□□□□□ -0.2
SMARCAL1-209ENST00000444508 RBMX2Q9Y388 322 aaKnown RBP13.79□□□□□ -0.2
SMARCAL1-209ENST00000444508 NBEAL1Q6ZS30 2694 aa13.79□□□□□ -0.2
SMARCAL1-209ENST00000444508 MGAM2Q2M2H8 2515 aa13.79□□□□□ -0.2
SMARCAL1-209ENST00000444508 LINC01548A6NM66 108 aa13.78□□□□□ -0.2
SMARCAL1-209ENST00000444508 SPDEFO95238 335 aa13.78□□□□□ -0.2
SMARCAL1-209ENST00000444508 CSF1P09603 554 aa13.78□□□□□ -0.2
SMARCAL1-209ENST00000444508 HLA-DMAP28067 261 aa13.78□□□□□ -0.2
SMARCAL1-209ENST00000444508 FXYD4P59646 89 aa13.78□□□□□ -0.2
SMARCAL1-209ENST00000444508 HERV-K104P61576 105 aa13.78□□□□□ -0.2
SMARCAL1-209ENST00000444508 DYRK1AQ13627 763 aa13.78□□□□□ -0.2
SMARCAL1-209ENST00000444508 HIST2H2BDQ6DRA6 164 aa13.78□□□□□ -0.2
SMARCAL1-209ENST00000444508 OVCH2Q7RTZ1 564 aa13.78□□□□□ -0.2
SMARCAL1-209ENST00000444508 BVESQ8NE79 360 aa13.78□□□□□ -0.2
SMARCAL1-209ENST00000444508 CITED2Q99967 270 aaPredicted RBP13.78□□□□□ -0.2
SMARCAL1-209ENST00000444508 METTL1Q9UBP6 276 aaKnown RBP13.78□□□□□ -0.2
SMARCAL1-209ENST00000444508 RSL24D1Q9UHA3 163 aaKnown RBP13.78□□□□□ -0.2
SMARCAL1-209ENST00000444508 PRELID3BQ9Y3B1 194 aa13.78□□□□□ -0.2
SMARCAL1-209ENST00000444508 VWFP04275 2813 aa13.78□□□□□ -0.2
SMARCAL1-209ENST00000444508 OPN1MWP04001 364 aa13.77□□□□□ -0.21
SMARCAL1-209ENST00000444508 OPN1MW2P0DN77 364 aa13.77□□□□□ -0.21
SMARCAL1-209ENST00000444508 OPN1MW3P0DN78 364 aa13.77□□□□□ -0.21
SMARCAL1-209ENST00000444508 HRH1P35367 487 aa13.77□□□□□ -0.21
SMARCAL1-209ENST00000444508 LGALS7P47929 136 aa13.77□□□□□ -0.21
SMARCAL1-209ENST00000444508 RFX2P48378 723 aa13.77□□□□□ -0.21
SMARCAL1-209ENST00000444508 PSG5Q15238 335 aa13.77□□□□□ -0.21
SMARCAL1-209ENST00000444508 NSUN5P1Q3KNT7 163 aa13.77□□□□□ -0.21
SMARCAL1-209ENST00000444508 RNASE12Q5GAN4 147 aaKnown RBP13.77□□□□□ -0.21
SMARCAL1-209ENST00000444508 KCTD9Q7L273 389 aa13.77□□□□□ -0.21
SMARCAL1-209ENST00000444508 ZNF329Q86UD4 541 aa13.77□□□□□ -0.21
SMARCAL1-209ENST00000444508 NDUFA11Q86Y39 141 aa13.77□□□□□ -0.21
SMARCAL1-209ENST00000444508 MCFD2Q8NI22 146 aa13.77□□□□□ -0.21
SMARCAL1-209ENST00000444508 DIRAS2Q96HU8 199 aa13.77□□□□□ -0.21
SMARCAL1-209ENST00000444508 HARBI1Q96MB7 349 aa13.77□□□□□ -0.21
SMARCAL1-209ENST00000444508 HSD17B10Q99714 261 aaKnown RBP13.77□□□□□ -0.21
SMARCAL1-209ENST00000444508 SLIRPQ9GZT3 109 aaKnown RBP13.77□□□□□ -0.21
SMARCAL1-209ENST00000444508 SLC5A7Q9GZV3 580 aa13.77□□□□□ -0.21
SMARCAL1-209ENST00000444508 TCRBV4S1A1TA0A5B7 111 aa13.76□□□□□ -0.21
SMARCAL1-209ENST00000444508 LINC00473A8K010 186 aa13.76□□□□□ -0.21
SMARCAL1-209ENST00000444508 SHOXO15266 292 aa13.76□□□□□ -0.21
SMARCAL1-209ENST00000444508 IGLV2-14P01704 120 aa13.76□□□□□ -0.21
SMARCAL1-209ENST00000444508 VDAC1P21796 283 aa13.76□□□□□ -0.21
SMARCAL1-209ENST00000444508 MSMO1Q15800 293 aa13.76□□□□□ -0.21
SMARCAL1-209ENST00000444508 TMEM177Q53S58 311 aa13.76□□□□□ -0.21
SMARCAL1-209ENST00000444508 KHDC1LQ5JSQ8 128 aa13.76□□□□□ -0.21
SMARCAL1-209ENST00000444508 C10orf99Q6UWK7 81 aa13.76□□□□□ -0.21
SMARCAL1-209ENST00000444508 DHRS11Q6UWP2 260 aa13.76□□□□□ -0.21
SMARCAL1-209ENST00000444508 TREML4Q6UXN2 200 aa13.76□□□□□ -0.21
SMARCAL1-209ENST00000444508 TMEM17Q86X19 198 aa13.76□□□□□ -0.21
SMARCAL1-209ENST00000444508 LYSMD2Q8IV50 215 aa13.76□□□□□ -0.21
SMARCAL1-209ENST00000444508 COMMD1Q8N668 190 aa13.76□□□□□ -0.21
SMARCAL1-209ENST00000444508 ZBTB34Q8NCN2 500 aa13.76□□□□□ -0.21
SMARCAL1-209ENST00000444508 TCTEX1D2Q8WW35 142 aa13.76□□□□□ -0.21
SMARCAL1-209ENST00000444508 FCAMRQ8WWV6 532 aa13.76□□□□□ -0.21
SMARCAL1-209ENST00000444508 DDB2Q92466 427 aa13.76□□□□□ -0.21
SMARCAL1-209ENST00000444508 BORCS5Q969J3 196 aa13.76□□□□□ -0.21
SMARCAL1-209ENST00000444508 ZNF2Q9BSG1 426 aaPredicted RBP13.76□□□□□ -0.21
SMARCAL1-209ENST00000444508 OR51J1Q9H342 316 aa13.76□□□□□ -0.21
SMARCAL1-209ENST00000444508 PARP11Q9NR21 331 aa13.76□□□□□ -0.21
SMARCAL1-209ENST00000444508 CCL28Q9NRJ3 127 aa13.76□□□□□ -0.21
SMARCAL1-209ENST00000444508 RABL2AQ9UBK7 228 aaPredicted RBP13.76□□□□□ -0.21
SMARCAL1-209ENST00000444508 RABL2BQ9UNT1 228 aa13.76□□□□□ -0.21
SMARCAL1-209ENST00000444508 IGHV7-81A0A0B4J1V7 117 aa13.75□□□□□ -0.21
SMARCAL1-209ENST00000444508 ZNF701M0R085 212 aaPredicted RBP13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms