RNA–Protein interactions for RNA: ENST00000439274.6

APP-208, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 2,517 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-208ENST00000439274 PFN1P07737 140 aaKnown RBP12.88□□□□□ -0.35
APP-208ENST00000439274 GPX4P36969 197 aaPredicted RBP12.88□□□□□ -0.35
APP-208ENST00000439274 PSMB3P49720 205 aa12.88□□□□□ -0.35
APP-208ENST00000439274 EIF4EBP1Q13541 118 aaPredicted RBP12.88□□□□□ -0.35
APP-208ENST00000439274 DTD1Q8TEA8 209 aa12.88□□□□□ -0.35
APP-208ENST00000439274 TMEM147Q9BVK8 224 aa12.88□□□□□ -0.35
APP-208ENST00000439274 PRO1933Q9H354 126 aa12.88□□□□□ -0.35
APP-208ENST00000439274 CTXND1A0A1B0GTU2 59 aa12.88□□□□□ -0.35
APP-208ENST00000439274 GATCO43716 136 aaKnown RBP12.88□□□□□ -0.35
APP-208ENST00000439274 RBMXL2O75526 392 aaKnown RBP12.88□□□□□ -0.35
APP-208ENST00000439274 ZNF883P0CG24 379 aa12.88□□□□□ -0.35
APP-208ENST00000439274 BMP5P22003 454 aa12.88□□□□□ -0.35
APP-208ENST00000439274 IGHV1-2P23083 117 aa12.88□□□□□ -0.35
APP-208ENST00000439274 COL10A1Q03692 680 aa12.88□□□□□ -0.35
APP-208ENST00000439274 MSMO1Q15800 293 aa12.88□□□□□ -0.35
APP-208ENST00000439274 CENPVQ7Z7K6 275 aaPredicted RBP12.88□□□□□ -0.35
APP-208ENST00000439274 COQ2Q96H96 371 aa12.88□□□□□ -0.35
APP-208ENST00000439274 AGMATQ9BSE5 352 aa12.88□□□□□ -0.35
APP-208ENST00000439274 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.88□□□□□ -0.35
APP-208ENST00000439274 METRNQ9UJH8 293 aa12.88□□□□□ -0.35
APP-208ENST00000439274 TRGV5A0A0B4J1U4 118 aa12.87□□□□□ -0.35
APP-208ENST00000439274 DEFB108AA8MXU0 73 aa12.87□□□□□ -0.35
APP-208ENST00000439274 C21orf140B9A014 251 aa12.87□□□□□ -0.35
APP-208ENST00000439274 MLNRO43193 412 aa12.87□□□□□ -0.35
APP-208ENST00000439274 SSTR5P35346 364 aa12.87□□□□□ -0.35
APP-208ENST00000439274 GABRA2P47869 451 aa12.87□□□□□ -0.35
APP-208ENST00000439274 UBE2NP61088 152 aaKnown RBP12.87□□□□□ -0.35
APP-208ENST00000439274 DEFA6Q01524 100 aa12.87□□□□□ -0.35
APP-208ENST00000439274 UNQ6494/PRO21346Q6UXR6 183 aa12.87□□□□□ -0.35
APP-208ENST00000439274 RFESDQ8TAC1 157 aa12.87□□□□□ -0.35
APP-208ENST00000439274 TGOLN2O43493 480 aa12.87□□□□□ -0.35
APP-208ENST00000439274 GALR1P47211 349 aa12.87□□□□□ -0.35
APP-208ENST00000439274 MRPL49Q13405 166 aaKnown RBP12.87□□□□□ -0.35
APP-208ENST00000439274 PRAMEF6Q5VXH4 476 aa12.87□□□□□ -0.35
APP-208ENST00000439274 TMPRSS7Q7RTY8 843 aa12.87□□□□□ -0.35
APP-208ENST00000439274 OR10P1Q8NGE3 313 aa12.87□□□□□ -0.35
APP-208ENST00000439274 RAB24Q969Q5 203 aa12.87□□□□□ -0.35
APP-208ENST00000439274 LOXL4Q96JB6 756 aa12.87□□□□□ -0.35
APP-208ENST00000439274 NPCDR1Q9BY65 106 aa12.87□□□□□ -0.35
APP-208ENST00000439274 SRD5A3Q9H8P0 318 aa12.87□□□□□ -0.35
APP-208ENST00000439274 FZR1Q9UM11 496 aa12.87□□□□□ -0.35
APP-208ENST00000439274 ASPMQ8IZT6 3477 aa12.87□□□□□ -0.35
APP-208ENST00000439274 LINC00473A8K010 186 aa12.86□□□□□ -0.35
APP-208ENST00000439274 IQCF6A8MYZ5 107 aa12.86□□□□□ -0.35
APP-208ENST00000439274 H7BYZ3 331 aa12.86□□□□□ -0.35
APP-208ENST00000439274 GALR2O43603 387 aaPredicted RBP12.86□□□□□ -0.35
APP-208ENST00000439274 PAGE4O60829 102 aa12.86□□□□□ -0.35
APP-208ENST00000439274 AGFG2O95081 481 aa12.86□□□□□ -0.35
APP-208ENST00000439274 TMEM164Q5U3C3 297 aa12.86□□□□□ -0.35
APP-208ENST00000439274 C11orf53Q8IXP5 236 aa12.86□□□□□ -0.35
APP-208ENST00000439274 OR5T1Q8NG75 326 aa12.86□□□□□ -0.35
APP-208ENST00000439274 OR51G1Q8NGK1 321 aa12.86□□□□□ -0.35
APP-208ENST00000439274 KLF14Q8TD94 323 aaPredicted RBP12.86□□□□□ -0.35
APP-208ENST00000439274 PCGF1Q9BSM1 259 aa12.86□□□□□ -0.35
APP-208ENST00000439274 HES4Q9HCC6 221 aa12.86□□□□□ -0.35
APP-208ENST00000439274 PITPNC1Q9UKF7 332 aa12.86□□□□□ -0.35
APP-208ENST00000439274 CDX4O14627 284 aaPredicted RBP12.86□□□□□ -0.35
APP-208ENST00000439274 PMS2P11Q13670 270 aa12.86□□□□□ -0.35
APP-208ENST00000439274 P2RY6Q15077 328 aa12.86□□□□□ -0.35
APP-208ENST00000439274 LTC4SQ16873 150 aa12.86□□□□□ -0.35
APP-208ENST00000439274 NINJ1Q92982 152 aa12.86□□□□□ -0.35
APP-208ENST00000439274 PLPPR2Q96GM1 343 aa12.86□□□□□ -0.35
APP-208ENST00000439274 DCTN5Q9BTE1 182 aa12.86□□□□□ -0.35
APP-208ENST00000439274 A0A1W2PPQ1 181 aa12.85□□□□□ -0.35
APP-208ENST00000439274 SMCO3A2RU48 225 aa12.85□□□□□ -0.35
APP-208ENST00000439274 OOEPA6NGQ2 149 aa12.85□□□□□ -0.35
APP-208ENST00000439274 ST8SIA5O15466 376 aa12.85□□□□□ -0.35
APP-208ENST00000439274 CD59P13987 128 aa12.85□□□□□ -0.35
APP-208ENST00000439274 ARG2P78540 354 aa12.85□□□□□ -0.35
APP-208ENST00000439274 CATR1Q13166 79 aa12.85□□□□□ -0.35
APP-208ENST00000439274 GCSAMLQ5JQS6 135 aa12.85□□□□□ -0.35
APP-208ENST00000439274 H2BFWTQ7Z2G1 175 aa12.85□□□□□ -0.35
APP-208ENST00000439274 C1QTNF9BB2RNN3 333 aa12.85□□□□□ -0.35
APP-208ENST00000439274 TMEM250H0YL14 139 aa12.85□□□□□ -0.35
APP-208ENST00000439274 CD46P15529 392 aa12.85□□□□□ -0.35
APP-208ENST00000439274 EGR1P18146 543 aa12.85□□□□□ -0.35
APP-208ENST00000439274 ATP6V1FQ16864 119 aa12.85□□□□□ -0.35
APP-208ENST00000439274 Q3ZCU0 254 aa12.85□□□□□ -0.35
APP-208ENST00000439274 ZBTB34Q8NCN2 500 aa12.85□□□□□ -0.35
APP-208ENST00000439274 OR13A1Q8NGR1 328 aa12.85□□□□□ -0.35
APP-208ENST00000439274 C14orf144Q96I85 54 aa12.85□□□□□ -0.35
APP-208ENST00000439274 PYGO2Q9BRQ0 406 aa12.85□□□□□ -0.35
APP-208ENST00000439274 ACTR3CQ9C0K3 210 aaPredicted RBP12.85□□□□□ -0.35
APP-208ENST00000439274 WISP2O76076 250 aa12.84□□□□□ -0.35
APP-208ENST00000439274 CLDN14O95500 239 aa12.84□□□□□ -0.35
APP-208ENST00000439274 GYPAP02724 150 aa12.84□□□□□ -0.35
APP-208ENST00000439274 COX5AP20674 150 aa12.84□□□□□ -0.35
APP-208ENST00000439274 NPPCP23582 126 aa12.84□□□□□ -0.35
APP-208ENST00000439274 GABRA6Q16445 453 aa12.84□□□□□ -0.35
APP-208ENST00000439274 PRSS8Q16651 343 aa12.84□□□□□ -0.35
APP-208ENST00000439274 SLC35E4Q6ICL7 350 aa12.84□□□□□ -0.35
APP-208ENST00000439274 FIP1L1Q6UN15 594 aaKnown RBP12.84□□□□□ -0.35
APP-208ENST00000439274 TMEM183AQ8IXX5 376 aa12.84□□□□□ -0.35
APP-208ENST00000439274 OR5B12Q96R08 314 aa12.84□□□□□ -0.35
APP-208ENST00000439274 AURKAIP1Q9NWT8 199 aaPredicted RBP12.84□□□□□ -0.35
APP-208ENST00000439274 PSG11Q9UQ72 335 aa12.84□□□□□ -0.35
APP-208ENST00000439274 CRYAAP02489 173 aa12.84□□□□□ -0.35
APP-208ENST00000439274 AMBPP02760 352 aa12.84□□□□□ -0.35
APP-208ENST00000439274 XKRY2A2RUG3 117 aa12.83□□□□□ -0.36
APP-208ENST00000439274 TMEM210A6NLX4 147 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms