RNA–Protein interactions for RNA: ENST00000429629.6

GARNL3-204, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 5

Gene GARNL3, Length 694 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-204ENST00000429629 ZNF79Q15937 498 aa11.94□□□□□ -0.5
GARNL3-204ENST00000429629 PYDC2Q56P42 97 aa11.94□□□□□ -0.5
GARNL3-204ENST00000429629 PDPNQ86YL7 162 aa11.94□□□□□ -0.5
GARNL3-204ENST00000429629 Q8N402 240 aa11.94□□□□□ -0.5
GARNL3-204ENST00000429629 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.94□□□□□ -0.5
GARNL3-204ENST00000429629 ZNF383Q8NA42 475 aa11.94□□□□□ -0.5
GARNL3-204ENST00000429629 ZNF2Q9BSG1 426 aaPredicted RBP11.94□□□□□ -0.5
GARNL3-204ENST00000429629 SLC25A33Q9BSK2 321 aa11.94□□□□□ -0.5
GARNL3-204ENST00000429629 PRSS22Q9GZN4 317 aa11.94□□□□□ -0.5
GARNL3-204ENST00000429629 MOB4Q9Y3A3 225 aa11.94□□□□□ -0.5
GARNL3-204ENST00000429629 WASHC3Q9Y3C0 194 aa11.94□□□□□ -0.5
GARNL3-204ENST00000429629 IGHV3-72A0A0B4J1Y9 119 aa11.93□□□□□ -0.5
GARNL3-204ENST00000429629 CHST1O43916 411 aa11.93□□□□□ -0.5
GARNL3-204ENST00000429629 RAB3DO95716 219 aa11.93□□□□□ -0.5
GARNL3-204ENST00000429629 APOA2P02652 100 aa11.93□□□□□ -0.5
GARNL3-204ENST00000429629 GNRHRP30968 328 aa11.93□□□□□ -0.5
GARNL3-204ENST00000429629 LGALS7P47929 136 aa11.93□□□□□ -0.5
GARNL3-204ENST00000429629 AP3S2P59780 193 aa11.93□□□□□ -0.5
GARNL3-204ENST00000429629 SRSF2Q01130 221 aaKnown RBP11.93□□□□□ -0.5
GARNL3-204ENST00000429629 RELBQ01201 579 aa11.93□□□□□ -0.5
GARNL3-204ENST00000429629 HES1Q14469 280 aa11.93□□□□□ -0.5
GARNL3-204ENST00000429629 Q6ZSV7 163 aa11.93□□□□□ -0.5
GARNL3-204ENST00000429629 LHFPL1Q86WI0 220 aa11.93□□□□□ -0.5
GARNL3-204ENST00000429629 TMEM219Q86XT9 240 aa11.93□□□□□ -0.5
GARNL3-204ENST00000429629 BVESQ8NE79 360 aa11.93□□□□□ -0.5
GARNL3-204ENST00000429629 NPBQ8NG41 125 aa11.93□□□□□ -0.5
GARNL3-204ENST00000429629 OR4C13Q8NGP0 309 aa11.93□□□□□ -0.5
GARNL3-204ENST00000429629 DDB2Q92466 427 aa11.93□□□□□ -0.5
GARNL3-204ENST00000429629 SRRQ9GZT4 340 aa11.93□□□□□ -0.5
GARNL3-204ENST00000429629 SLC5A7Q9GZV3 580 aa11.93□□□□□ -0.5
GARNL3-204ENST00000429629 BEX1Q9HBH7 125 aa11.93□□□□□ -0.5
GARNL3-204ENST00000429629 COL6A5A8TX70 2615 aa11.92□□□□□ -0.5
GARNL3-204ENST00000429629 AMY1AP04745 511 aa11.92□□□□□ -0.5
GARNL3-204ENST00000429629 AMY2AP04746 511 aa11.92□□□□□ -0.5
GARNL3-204ENST00000429629 AKAIN1P0CW23 69 aa11.92□□□□□ -0.5
GARNL3-204ENST00000429629 ECI1P42126 302 aa11.92□□□□□ -0.5
GARNL3-204ENST00000429629 RAG2P55895 527 aa11.92□□□□□ -0.5
GARNL3-204ENST00000429629 TERB2Q8NHR7 220 aa11.92□□□□□ -0.5
GARNL3-204ENST00000429629 SECTM1Q8WVN6 248 aa11.92□□□□□ -0.5
GARNL3-204ENST00000429629 TRIM63Q969Q1 353 aa11.92□□□□□ -0.5
GARNL3-204ENST00000429629 C5orf30Q96GV9 206 aa11.92□□□□□ -0.5
GARNL3-204ENST00000429629 SLC2A8Q9NY64 477 aa11.92□□□□□ -0.5
GARNL3-204ENST00000429629 PRELID3BQ9Y3B1 194 aa11.92□□□□□ -0.5
GARNL3-204ENST00000429629 CLPSL1A2RUU4 121 aa11.91□□□□□ -0.5
GARNL3-204ENST00000429629 DISC1C4P0D8 188 aa11.91□□□□□ -0.5
GARNL3-204ENST00000429629 RBFOX2O43251 390 aaKnown RBP eCLIP11.91□□□□□ -0.5
GARNL3-204ENST00000429629 NDUFA3O95167 84 aa11.91□□□□□ -0.5
GARNL3-204ENST00000429629 ZNF735P0CB33 412 aa11.91□□□□□ -0.5
GARNL3-204ENST00000429629 CBX3Q13185 183 aa11.91□□□□□ -0.5
GARNL3-204ENST00000429629 RTL8BQ17RB0 113 aa11.91□□□□□ -0.5
GARNL3-204ENST00000429629 TMEM177Q53S58 311 aa11.91□□□□□ -0.5
GARNL3-204ENST00000429629 AADACL3Q5VUY0 350 aa11.91□□□□□ -0.5
GARNL3-204ENST00000429629 CMTM1Q8IZ96 169 aa11.91□□□□□ -0.5
GARNL3-204ENST00000429629 MFSD4AQ8N468 514 aa11.91□□□□□ -0.5
GARNL3-204ENST00000429629 TCTEX1D1Q8N7M0 179 aa11.91□□□□□ -0.5
GARNL3-204ENST00000429629 C5orf56Q8N8D9 126 aa11.91□□□□□ -0.5
GARNL3-204ENST00000429629 DRAXINQ8NBI3 349 aaPredicted RBP11.91□□□□□ -0.5
GARNL3-204ENST00000429629 LINC01006Q8NI28 216 aa11.91□□□□□ -0.5
GARNL3-204ENST00000429629 CD300LFQ8TDQ1 290 aa11.91□□□□□ -0.5
GARNL3-204ENST00000429629 S100ZQ8WXG8 99 aa11.91□□□□□ -0.5
GARNL3-204ENST00000429629 FLYWCH2Q96CP2 140 aaKnown RBP11.91□□□□□ -0.5
GARNL3-204ENST00000429629 ZNF486Q96H40 463 aaPredicted RBP11.91□□□□□ -0.5
GARNL3-204ENST00000429629 TSNAXQ99598 290 aaKnown RBP11.91□□□□□ -0.5
GARNL3-204ENST00000429629 TINAGL1Q9GZM7 467 aaPredicted RBP11.91□□□□□ -0.5
GARNL3-204ENST00000429629 CCL28Q9NRJ3 127 aa11.91□□□□□ -0.5
GARNL3-204ENST00000429629 FAM212BQ9NTI7 297 aaPredicted RBP11.91□□□□□ -0.5
GARNL3-204ENST00000429629 SLC35D1Q9NTN3 355 aa11.91□□□□□ -0.5
GARNL3-204ENST00000429629 LIN7CQ9NUP9 197 aaKnown RBP11.91□□□□□ -0.5
GARNL3-204ENST00000429629 H7C2Y5 167 aa11.9□□□□□ -0.5
GARNL3-204ENST00000429629 M0QYG6 137 aa11.9□□□□□ -0.5
GARNL3-204ENST00000429629 SPDEFO95238 335 aa11.9□□□□□ -0.5
GARNL3-204ENST00000429629 S100GP29377 79 aa11.9□□□□□ -0.5
GARNL3-204ENST00000429629 FAUP35544 74 aaKnown RBP11.9□□□□□ -0.5
GARNL3-204ENST00000429629 KIR2DS2P43631 304 aa11.9□□□□□ -0.5
GARNL3-204ENST00000429629 BLCAPP62952 87 aa11.9□□□□□ -0.5
GARNL3-204ENST00000429629 HNF4GQ14541 408 aa11.9□□□□□ -0.5
GARNL3-204ENST00000429629 SURF2Q15527 256 aaPredicted RBP11.9□□□□□ -0.5
GARNL3-204ENST00000429629 RNASE12Q5GAN4 147 aaKnown RBP11.9□□□□□ -0.5
GARNL3-204ENST00000429629 SLC38A6Q8IZM9 456 aa11.9□□□□□ -0.5
GARNL3-204ENST00000429629 FAM71E2Q8N5Q1 922 aa11.9□□□□□ -0.5
GARNL3-204ENST00000429629 Q8N9W7 124 aa11.9□□□□□ -0.5
GARNL3-204ENST00000429629 SPATA3Q8NHX4 192 aa11.9□□□□□ -0.5
GARNL3-204ENST00000429629 OSR1Q8TAX0 266 aaPredicted RBP11.9□□□□□ -0.5
GARNL3-204ENST00000429629 MDFIQ99750 246 aa11.9□□□□□ -0.5
GARNL3-204ENST00000429629 PRRT1Q99946 306 aa11.9□□□□□ -0.5
GARNL3-204ENST00000429629 AIFM2Q9BRQ8 373 aa11.9□□□□□ -0.5
GARNL3-204ENST00000429629 RSRP1Q9BUV0 290 aa11.9□□□□□ -0.5
GARNL3-204ENST00000429629 LINC00473A8K010 186 aa11.89□□□□□ -0.51
GARNL3-204ENST00000429629 J3QRK9 145 aa11.89□□□□□ -0.51
GARNL3-204ENST00000429629 GPR31O00270 319 aa11.89□□□□□ -0.51
GARNL3-204ENST00000429629 F2RL1P55085 397 aa11.89□□□□□ -0.51
GARNL3-204ENST00000429629 FXYD4P59646 89 aa11.89□□□□□ -0.51
GARNL3-204ENST00000429629 CATR1Q13166 79 aa11.89□□□□□ -0.51
GARNL3-204ENST00000429629 KLF9Q13886 244 aaPredicted RBP11.89□□□□□ -0.51
GARNL3-204ENST00000429629 FBLN7Q53RD9 439 aa11.89□□□□□ -0.51
GARNL3-204ENST00000429629 GLDNQ6ZMI3 551 aaPredicted RBP11.89□□□□□ -0.51
GARNL3-204ENST00000429629 ZNF818PQ6ZRF7 136 aa11.89□□□□□ -0.51
GARNL3-204ENST00000429629 CADM3Q8N126 398 aa11.89□□□□□ -0.51
GARNL3-204ENST00000429629 TOMM5Q8N4H5 51 aa11.89□□□□□ -0.51
GARNL3-204ENST00000429629 OR4D10Q8NGI6 311 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 181.9 ms