RNA–Protein interactions for RNA: ENST00000428014.1

SMC1A-203, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-203ENST00000428014 VDAC1P21796 283 aa7.19□□□□□ -1.26
SMC1A-203ENST00000428014 PSMB8P28062 276 aa7.19□□□□□ -1.26
SMC1A-203ENST00000428014 MYCNOSP40205 109 aa7.19□□□□□ -1.26
SMC1A-203ENST00000428014 RPL23AP62750 156 aaKnown RBP7.19□□□□□ -1.26
SMC1A-203ENST00000428014 PLA2G7Q13093 441 aa7.19□□□□□ -1.26
SMC1A-203ENST00000428014 CBX3Q13185 183 aa7.19□□□□□ -1.26
SMC1A-203ENST00000428014 C19orf54Q5BKX5 351 aa7.19□□□□□ -1.26
SMC1A-203ENST00000428014 CXorf66Q5JRM2 361 aaPredicted RBP7.19□□□□□ -1.26
SMC1A-203ENST00000428014 GPR141Q7Z602 305 aa7.19□□□□□ -1.26
SMC1A-203ENST00000428014 HOGA1Q86XE5 327 aa7.19□□□□□ -1.26
SMC1A-203ENST00000428014 ZNF645Q8N7E2 425 aa7.19□□□□□ -1.26
SMC1A-203ENST00000428014 UBALD1Q8TB05 177 aa7.19□□□□□ -1.26
SMC1A-203ENST00000428014 SETD6Q8TBK2 473 aa7.19□□□□□ -1.26
SMC1A-203ENST00000428014 GIMAP1Q8WWP7 306 aa7.19□□□□□ -1.26
SMC1A-203ENST00000428014 DDB2Q92466 427 aa7.19□□□□□ -1.26
SMC1A-203ENST00000428014 AP3S1Q92572 193 aa7.19□□□□□ -1.26
SMC1A-203ENST00000428014 FLYWCH2Q96CP2 140 aaKnown RBP7.19□□□□□ -1.26
SMC1A-203ENST00000428014 RCC1LQ96I51 464 aaKnown RBP7.19□□□□□ -1.26
SMC1A-203ENST00000428014 UBE2E2Q96LR5 201 aa7.19□□□□□ -1.26
SMC1A-203ENST00000428014 AIFM2Q9BRQ8 373 aa7.19□□□□□ -1.26
SMC1A-203ENST00000428014 GINS4Q9BRT9 223 aa7.19□□□□□ -1.26
SMC1A-203ENST00000428014 FUNDC2Q9BWH2 189 aa7.19□□□□□ -1.26
SMC1A-203ENST00000428014 OR51J1Q9H342 316 aa7.19□□□□□ -1.26
SMC1A-203ENST00000428014 AUNIPQ9H7T9 357 aa7.19□□□□□ -1.26
SMC1A-203ENST00000428014 SCPEP1Q9HB40 452 aa7.19□□□□□ -1.26
SMC1A-203ENST00000428014 OR1A1Q9P1Q5 309 aa7.19□□□□□ -1.26
SMC1A-203ENST00000428014 ZNF107Q9UII5 783 aaPredicted RBP7.19□□□□□ -1.26
SMC1A-203ENST00000428014 IGHV7-81A0A0B4J1V7 117 aa7.18□□□□□ -1.26
SMC1A-203ENST00000428014 TCRBV4S1A1TA0A5B7 111 aa7.18□□□□□ -1.26
SMC1A-203ENST00000428014 ZNF736B4DX44 427 aaPredicted RBP7.18□□□□□ -1.26
SMC1A-203ENST00000428014 RBFOX2O43251 390 aaKnown RBP eCLIP7.18□□□□□ -1.26
SMC1A-203ENST00000428014 RPS19P39019 145 aaKnown RBP7.18□□□□□ -1.26
SMC1A-203ENST00000428014 OR3A3P47888 321 aa7.18□□□□□ -1.26
SMC1A-203ENST00000428014 F2RL1P55085 397 aa7.18□□□□□ -1.26
SMC1A-203ENST00000428014 ARPC4P59998 168 aa7.18□□□□□ -1.26
SMC1A-203ENST00000428014 RTL8BQ17RB0 113 aa7.18□□□□□ -1.26
SMC1A-203ENST00000428014 IGSF11Q5DX21 431 aa7.18□□□□□ -1.26
SMC1A-203ENST00000428014 FAM209BQ5JX69 171 aa7.18□□□□□ -1.26
SMC1A-203ENST00000428014 IDNKQ5T6J7 187 aa7.18□□□□□ -1.26
SMC1A-203ENST00000428014 FAM53AQ6NSI3 398 aaPredicted RBP7.18□□□□□ -1.26
SMC1A-203ENST00000428014 ZNF66Q6ZN08 573 aa7.18□□□□□ -1.26
SMC1A-203ENST00000428014 ZNF383Q8NA42 475 aa7.18□□□□□ -1.26
SMC1A-203ENST00000428014 TEX45Q8NA69 505 aa7.18□□□□□ -1.26
SMC1A-203ENST00000428014 BEST4Q8NFU0 473 aa7.18□□□□□ -1.26
SMC1A-203ENST00000428014 OR5M8Q8NGP6 311 aa7.18□□□□□ -1.26
SMC1A-203ENST00000428014 ABHD14BQ96IU4 210 aa7.18□□□□□ -1.26
SMC1A-203ENST00000428014 HSD17B10Q99714 261 aaKnown RBP7.18□□□□□ -1.26
SMC1A-203ENST00000428014 SLA2Q9H6Q3 261 aa7.18□□□□□ -1.26
SMC1A-203ENST00000428014 BATF3Q9NR55 127 aa7.18□□□□□ -1.26
SMC1A-203ENST00000428014 FAM212BQ9NTI7 297 aaPredicted RBP7.18□□□□□ -1.26
SMC1A-203ENST00000428014 SDHAF2Q9NX18 166 aa7.18□□□□□ -1.26
SMC1A-203ENST00000428014 NUBP2Q9Y5Y2 271 aa7.18□□□□□ -1.26
SMC1A-203ENST00000428014 TNCP24821 2201 aa7.17□□□□□ -1.26
SMC1A-203ENST00000428014 IGHV3-72A0A0B4J1Y9 119 aa7.17□□□□□ -1.26
SMC1A-203ENST00000428014 A0A0B4J203 849 aa7.17□□□□□ -1.26
SMC1A-203ENST00000428014 TMEM235A6NFC5 223 aa7.17□□□□□ -1.26
SMC1A-203ENST00000428014 BET1O15155 118 aa7.17□□□□□ -1.26
SMC1A-203ENST00000428014 SSX5O60225 188 aa7.17□□□□□ -1.26
SMC1A-203ENST00000428014 OR8U9P0C7N5 309 aa7.17□□□□□ -1.26
SMC1A-203ENST00000428014 DUTP33316 252 aaKnown RBP7.17□□□□□ -1.26
SMC1A-203ENST00000428014 KIR2DS2P43631 304 aa7.17□□□□□ -1.26
SMC1A-203ENST00000428014 RORCP51449 518 aa7.17□□□□□ -1.26
SMC1A-203ENST00000428014 HNF4GQ14541 408 aa7.17□□□□□ -1.26
SMC1A-203ENST00000428014 CTF1Q16619 201 aa7.17□□□□□ -1.26
SMC1A-203ENST00000428014 TMEM95Q3KNT9 176 aa7.17□□□□□ -1.26
SMC1A-203ENST00000428014 RPL39P5Q59GN2 51 aa7.17□□□□□ -1.26
SMC1A-203ENST00000428014 DHRS11Q6UWP2 260 aa7.17□□□□□ -1.26
SMC1A-203ENST00000428014 FAM131AQ6UXB0 335 aa7.17□□□□□ -1.26
SMC1A-203ENST00000428014 PPP1R27Q86WC6 154 aa7.17□□□□□ -1.26
SMC1A-203ENST00000428014 ZNF695Q8IW36 515 aa7.17□□□□□ -1.26
SMC1A-203ENST00000428014 OR5AP2Q8NGF4 316 aa7.17□□□□□ -1.26
SMC1A-203ENST00000428014 OR8U1Q8NH10 309 aa7.17□□□□□ -1.26
SMC1A-203ENST00000428014 VSTM2AQ8TAG5 236 aa7.17□□□□□ -1.26
SMC1A-203ENST00000428014 C4orf3Q8WVX3 66 aa7.17□□□□□ -1.26
SMC1A-203ENST00000428014 R3HDM4Q96D70 268 aa7.17□□□□□ -1.26
SMC1A-203ENST00000428014 P2RX4Q99571 388 aa7.17□□□□□ -1.26
SMC1A-203ENST00000428014 PARP12Q9H0J9 701 aaKnown RBP7.17□□□□□ -1.26
SMC1A-203ENST00000428014 OR2D2Q9H210 308 aa7.17□□□□□ -1.26
SMC1A-203ENST00000428014 SLC35D1Q9NTN3 355 aa7.17□□□□□ -1.26
SMC1A-203ENST00000428014 NECAP2Q9NVZ3 263 aa7.17□□□□□ -1.26
SMC1A-203ENST00000428014 NDUFA13Q9P0J0 144 aa7.17□□□□□ -1.26
SMC1A-203ENST00000428014 MRPS7Q9Y2R9 242 aaKnown RBP7.17□□□□□ -1.26
SMC1A-203ENST00000428014 PRELID3BQ9Y3B1 194 aa7.17□□□□□ -1.26
SMC1A-203ENST00000428014 SMIM31A0A1B0GVY4 71 aa7.16□□□□□ -1.26
SMC1A-203ENST00000428014 CRYGBP07316 175 aa7.16□□□□□ -1.26
SMC1A-203ENST00000428014 CLEC2LP0C7M8 214 aa7.16□□□□□ -1.26
SMC1A-203ENST00000428014 PF4V1P10720 104 aa7.16□□□□□ -1.26
SMC1A-203ENST00000428014 TBPP20226 339 aa7.16□□□□□ -1.26
SMC1A-203ENST00000428014 TMBIM6P55061 237 aa7.16□□□□□ -1.26
SMC1A-203ENST00000428014 TAS2R46P59540 309 aa7.16□□□□□ -1.26
SMC1A-203ENST00000428014 UBE2KP61086 200 aa7.16□□□□□ -1.26
SMC1A-203ENST00000428014 CX3CL1P78423 397 aa7.16□□□□□ -1.26
SMC1A-203ENST00000428014 SSBP1Q04837 148 aaKnown RBP7.16□□□□□ -1.26
SMC1A-203ENST00000428014 MXD1Q05195 221 aa7.16□□□□□ -1.26
SMC1A-203ENST00000428014 EIF4EBP1Q13541 118 aaPredicted RBP7.16□□□□□ -1.26
SMC1A-203ENST00000428014 DCTN2Q13561 401 aaKnown RBP7.16□□□□□ -1.26
SMC1A-203ENST00000428014 FHL3Q13643 280 aa7.16□□□□□ -1.26
SMC1A-203ENST00000428014 PSG5Q15238 335 aa7.16□□□□□ -1.26
SMC1A-203ENST00000428014 POU2AF1Q16633 256 aa7.16□□□□□ -1.26
SMC1A-203ENST00000428014 KLK9Q2XQG4 91 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms