RNA–Protein interactions for RNA: ENST00000426778.5

ERCC3-202, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 2,916 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-202ENST00000426778 TBC1D28Q2M2D7 210 aa12.06□□□□□ -0.48
ERCC3-202ENST00000426778 CNEP1R1Q8N9A8 125 aa12.06□□□□□ -0.48
ERCC3-202ENST00000426778 PKIBQ9C010 78 aa12.06□□□□□ -0.48
ERCC3-202ENST00000426778 CDH20Q9HBT6 801 aa12.06□□□□□ -0.48
ERCC3-202ENST00000426778 GP6Q9HCN6 339 aa12.06□□□□□ -0.48
ERCC3-202ENST00000426778 TREM2Q9NZC2 230 aa12.06□□□□□ -0.48
ERCC3-202ENST00000426778 TACC2O95359 2948 aa12.06□□□□□ -0.48
ERCC3-202ENST00000426778 TRAV38-1A0A0B4J264 116 aa12.05□□□□□ -0.48
ERCC3-202ENST00000426778 FAM3BP58499 235 aaPredicted RBP12.05□□□□□ -0.48
ERCC3-202ENST00000426778 RPL23P62829 140 aaKnown RBP12.05□□□□□ -0.48
ERCC3-202ENST00000426778 Q3ZCU0 254 aa12.05□□□□□ -0.48
ERCC3-202ENST00000426778 GTF3AQ92664 365 aaKnown RBP12.05□□□□□ -0.48
ERCC3-202ENST00000426778 STRADBQ9C0K7 418 aa12.05□□□□□ -0.48
ERCC3-202ENST00000426778 A0A1B0GUS0 222 aa12.05□□□□□ -0.48
ERCC3-202ENST00000426778 SMCO3A2RU48 225 aa12.05□□□□□ -0.48
ERCC3-202ENST00000426778 PHOX2AO14813 284 aa12.05□□□□□ -0.48
ERCC3-202ENST00000426778 ACP1P24666 158 aa12.05□□□□□ -0.48
ERCC3-202ENST00000426778 TMEM241Q24JQ0 296 aa12.05□□□□□ -0.48
ERCC3-202ENST00000426778 BSXQ3C1V8 233 aa12.05□□□□□ -0.48
ERCC3-202ENST00000426778 LINC00596Q86U02 117 aa12.05□□□□□ -0.48
ERCC3-202ENST00000426778 PSMG3Q9BT73 122 aaPredicted RBP12.05□□□□□ -0.48
ERCC3-202ENST00000426778 DERL1Q9BUN8 251 aa12.05□□□□□ -0.48
ERCC3-202ENST00000426778 GFOD1Q9NXC2 390 aa12.05□□□□□ -0.48
ERCC3-202ENST00000426778 PSG11Q9UQ72 335 aa12.05□□□□□ -0.48
ERCC3-202ENST00000426778 PCNX1Q96RV3 2341 aa12.05□□□□□ -0.48
ERCC3-202ENST00000426778 LNP1A1A4G5 178 aa12.04□□□□□ -0.48
ERCC3-202ENST00000426778 PTBP3O95758 552 aaKnown RBP12.04□□□□□ -0.48
ERCC3-202ENST00000426778 ERVK11-1P61568 191 aa12.04□□□□□ -0.48
ERCC3-202ENST00000426778 TMEM14EPQ6UXP3 125 aa12.04□□□□□ -0.48
ERCC3-202ENST00000426778 DTD1Q8TEA8 209 aa12.04□□□□□ -0.48
ERCC3-202ENST00000426778 RAB24Q969Q5 203 aa12.04□□□□□ -0.48
ERCC3-202ENST00000426778 GALMQ96C23 342 aa12.04□□□□□ -0.48
ERCC3-202ENST00000426778 ABI3Q9P2A4 366 aa12.04□□□□□ -0.48
ERCC3-202ENST00000426778 MLNRO43193 412 aa12.04□□□□□ -0.48
ERCC3-202ENST00000426778 SLC25A6P12236 298 aa12.04□□□□□ -0.48
ERCC3-202ENST00000426778 GALR1P47211 349 aa12.04□□□□□ -0.48
ERCC3-202ENST00000426778 RND2P52198 227 aa12.04□□□□□ -0.48
ERCC3-202ENST00000426778 UBE2NP61088 152 aaKnown RBP12.04□□□□□ -0.48
ERCC3-202ENST00000426778 SERF2P84101 59 aa12.04□□□□□ -0.48
ERCC3-202ENST00000426778 ZNF66Q6ZN08 573 aa12.04□□□□□ -0.48
ERCC3-202ENST00000426778 OR10A7Q8NGE5 316 aa12.04□□□□□ -0.48
ERCC3-202ENST00000426778 KCNIP1Q9NZI2 227 aa12.04□□□□□ -0.48
ERCC3-202ENST00000426778 PIEZO2Q9H5I5 2752 aa12.04□□□□□ -0.48
ERCC3-202ENST00000426778 B4DEV8 164 aa12.04□□□□□ -0.48
ERCC3-202ENST00000426778 RAC2P15153 192 aa12.04□□□□□ -0.48
ERCC3-202ENST00000426778 HIST1H1BP16401 226 aaKnown RBP12.04□□□□□ -0.48
ERCC3-202ENST00000426778 IGHV1-2P23083 117 aa12.04□□□□□ -0.48
ERCC3-202ENST00000426778 PNRC1Q12796 327 aaPredicted RBP12.04□□□□□ -0.48
ERCC3-202ENST00000426778 SRSF6Q13247 344 aaKnown RBP12.04□□□□□ -0.48
ERCC3-202ENST00000426778 UBALD2Q8IYN6 164 aa12.04□□□□□ -0.48
ERCC3-202ENST00000426778 OR13A1Q8NGR1 328 aa12.04□□□□□ -0.48
ERCC3-202ENST00000426778 POM121Q96HA1 1249 aa12.04□□□□□ -0.48
ERCC3-202ENST00000426778 C14orf144Q96I85 54 aa12.04□□□□□ -0.48
ERCC3-202ENST00000426778 SPRY4Q9C004 299 aa12.04□□□□□ -0.48
ERCC3-202ENST00000426778 PATZ1Q9HBE1 687 aaKnown RBP12.04□□□□□ -0.48
ERCC3-202ENST00000426778 NAT8Q9UHE5 227 aa12.04□□□□□ -0.48
ERCC3-202ENST00000426778 WASF3Q9UPY6 502 aa12.04□□□□□ -0.48
ERCC3-202ENST00000426778 FUT9Q9Y231 359 aa12.04□□□□□ -0.48
ERCC3-202ENST00000426778 COL27A1Q8IZC6 1860 aaPredicted RBP12.03□□□□□ -0.48
ERCC3-202ENST00000426778 A0A0U1RQK1 487 aa12.03□□□□□ -0.48
ERCC3-202ENST00000426778 A0A1B0GV90 55 aa12.03□□□□□ -0.48
ERCC3-202ENST00000426778 LRRC30A6NM36 301 aa12.03□□□□□ -0.48
ERCC3-202ENST00000426778 ZNF705GA8MUZ8 300 aaPredicted RBP12.03□□□□□ -0.48
ERCC3-202ENST00000426778 H7BYZ3 331 aa12.03□□□□□ -0.48
ERCC3-202ENST00000426778 MPLP40238 635 aa12.03□□□□□ -0.48
ERCC3-202ENST00000426778 EDDM3BP56851 147 aa12.03□□□□□ -0.48
ERCC3-202ENST00000426778 ZNF645Q8N7E2 425 aa12.03□□□□□ -0.48
ERCC3-202ENST00000426778 KLF14Q8TD94 323 aaPredicted RBP12.03□□□□□ -0.48
ERCC3-202ENST00000426778 COQ2Q96H96 371 aa12.03□□□□□ -0.48
ERCC3-202ENST00000426778 MBNL3Q9NUK0 354 aaKnown RBP12.03□□□□□ -0.48
ERCC3-202ENST00000426778 TET2Q6N021 2002 aaPredicted RBP12.03□□□□□ -0.48
ERCC3-202ENST00000426778 IFNA1P01562 189 aa12.03□□□□□ -0.48
ERCC3-202ENST00000426778 RNF224P0DH78 156 aa12.03□□□□□ -0.48
ERCC3-202ENST00000426778 NPPCP23582 126 aa12.03□□□□□ -0.48
ERCC3-202ENST00000426778 PSMB3P49720 205 aa12.03□□□□□ -0.48
ERCC3-202ENST00000426778 LURAP1LQ8IV03 231 aa12.03□□□□□ -0.48
ERCC3-202ENST00000426778 OR13D1Q8NGV5 346 aa12.03□□□□□ -0.48
ERCC3-202ENST00000426778 NINJ1Q92982 152 aa12.03□□□□□ -0.48
ERCC3-202ENST00000426778 POLDIP2Q9Y2S7 368 aa12.03□□□□□ -0.48
ERCC3-202ENST00000426778 TRGV5A0A0B4J1U4 118 aa12.02□□□□□ -0.48
ERCC3-202ENST00000426778 XKRY2A2RUG3 117 aa12.02□□□□□ -0.48
ERCC3-202ENST00000426778 OPN1MWP04001 364 aa12.02□□□□□ -0.48
ERCC3-202ENST00000426778 OPN1MW2P0DN77 364 aa12.02□□□□□ -0.48
ERCC3-202ENST00000426778 OPN1MW3P0DN78 364 aa12.02□□□□□ -0.48
ERCC3-202ENST00000426778 ATP5G3P48201 142 aa12.02□□□□□ -0.48
ERCC3-202ENST00000426778 UTF1Q5T230 341 aa12.02□□□□□ -0.48
ERCC3-202ENST00000426778 CST9LP1Q5W188 147 aa12.02□□□□□ -0.48
ERCC3-202ENST00000426778 OR10P1Q8NGE3 313 aa12.02□□□□□ -0.48
ERCC3-202ENST00000426778 GPR87Q9BY21 358 aa12.02□□□□□ -0.48
ERCC3-202ENST00000426778 NPCDR1Q9BY65 106 aa12.02□□□□□ -0.48
ERCC3-202ENST00000426778 HSPB7Q9UBY9 170 aa12.02□□□□□ -0.48
ERCC3-202ENST00000426778 KBTBD11O94819 623 aa12.02□□□□□ -0.49
ERCC3-202ENST00000426778 PFN1P07737 140 aaKnown RBP12.02□□□□□ -0.49
ERCC3-202ENST00000426778 H2BFWTQ7Z2G1 175 aa12.02□□□□□ -0.49
ERCC3-202ENST00000426778 PINX1Q96BK5 328 aaKnown RBP12.02□□□□□ -0.49
ERCC3-202ENST00000426778 QTRT1Q9BXR0 403 aaKnown RBP12.02□□□□□ -0.49
ERCC3-202ENST00000426778 OPA3Q9H6K4 179 aa12.02□□□□□ -0.49
ERCC3-202ENST00000426778 TPRP12270 2363 aaKnown RBP12.02□□□□□ -0.49
ERCC3-202ENST00000426778 NPIPB11E5RHQ5 1161 aa12.01□□□□□ -0.49
ERCC3-202ENST00000426778 TNFSF15O95150 251 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms