RNA–Protein interactions for RNA: ENST00000426447.3

PDAP1-202, Transcript of PDGFA associated protein 1, humanhuman

TSL 5

Gene PDAP1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-202ENST00000426447 KLK5Q9Y337 293 aaPredicted RBP11.03□□□□□ -0.64
PDAP1-202ENST00000426447 TRBV5-7A0A0A0MS05 114 aa11.02□□□□□ -0.65
PDAP1-202ENST00000426447 LOC100130705A0A1B0GUX0 176 aa11.02□□□□□ -0.65
PDAP1-202ENST00000426447 M0R1X1 148 aa11.02□□□□□ -0.65
PDAP1-202ENST00000426447 BMPR1BO00238 502 aa11.02□□□□□ -0.65
PDAP1-202ENST00000426447 CIB2O75838 187 aa11.02□□□□□ -0.65
PDAP1-202ENST00000426447 TUSC2O75896 110 aa11.02□□□□□ -0.65
PDAP1-202ENST00000426447 KIR2DS2P43631 304 aa11.02□□□□□ -0.65
PDAP1-202ENST00000426447 SSBP2P81877 361 aaPredicted RBP11.02□□□□□ -0.65
PDAP1-202ENST00000426447 CBX3Q13185 183 aa11.02□□□□□ -0.65
PDAP1-202ENST00000426447 SMN1Q16637 294 aaKnown RBP11.02□□□□□ -0.65
PDAP1-202ENST00000426447 MOB1BQ7L9L4 216 aa11.02□□□□□ -0.65
PDAP1-202ENST00000426447 NKAIN3Q8N8D7 197 aa11.02□□□□□ -0.65
PDAP1-202ENST00000426447 WDR89Q96FK6 387 aaPredicted RBP11.02□□□□□ -0.65
PDAP1-202ENST00000426447 SLC29A1Q99808 456 aa11.02□□□□□ -0.65
PDAP1-202ENST00000426447 GGTLC1Q9BX51 225 aa11.02□□□□□ -0.65
PDAP1-202ENST00000426447 PLEKHJ1Q9NW61 149 aa11.02□□□□□ -0.65
PDAP1-202ENST00000426447 TECRQ9NZ01 308 aaKnown RBP11.02□□□□□ -0.65
PDAP1-202ENST00000426447 LOC102724200A0A096LPH7 203 aaPredicted RBP11.01□□□□□ -0.65
PDAP1-202ENST00000426447 A0A0J9YWU9 116 aa11.01□□□□□ -0.65
PDAP1-202ENST00000426447 PNMA8CA0A1B0GUJ8 204 aa11.01□□□□□ -0.65
PDAP1-202ENST00000426447 IRGMA1A4Y4 181 aa11.01□□□□□ -0.65
PDAP1-202ENST00000426447 NAPSAO96009 420 aa11.01□□□□□ -0.65
PDAP1-202ENST00000426447 OR9G9P0C7N8 305 aa11.01□□□□□ -0.65
PDAP1-202ENST00000426447 UBBP0CG47 229 aa11.01□□□□□ -0.65
PDAP1-202ENST00000426447 FOLR2P14207 255 aa11.01□□□□□ -0.65
PDAP1-202ENST00000426447 RHOGP84095 191 aa11.01□□□□□ -0.65
PDAP1-202ENST00000426447 MED21Q13503 144 aa11.01□□□□□ -0.65
PDAP1-202ENST00000426447 EXOSC2Q13868 293 aaKnown RBP11.01□□□□□ -0.65
PDAP1-202ENST00000426447 OR10K2Q6IF99 312 aa11.01□□□□□ -0.65
PDAP1-202ENST00000426447 ZNF880Q6PDB4 577 aa11.01□□□□□ -0.65
PDAP1-202ENST00000426447 APH1BQ8WW43 257 aa11.01□□□□□ -0.65
PDAP1-202ENST00000426447 HARBI1Q96MB7 349 aa11.01□□□□□ -0.65
PDAP1-202ENST00000426447 RIMS4Q9H426 269 aaPredicted RBP11.01□□□□□ -0.65
PDAP1-202ENST00000426447 AKIP1Q9NQ31 210 aa11.01□□□□□ -0.65
PDAP1-202ENST00000426447 CLEC2DQ9UHP7 191 aa11.01□□□□□ -0.65
PDAP1-202ENST00000426447 EXOSC1Q9Y3B2 195 aaKnown RBP11.01□□□□□ -0.65
PDAP1-202ENST00000426447 C2orf70A6NJV1 201 aa11□□□□□ -0.65
PDAP1-202ENST00000426447 FAM223BA6NKX1 122 aa11□□□□□ -0.65
PDAP1-202ENST00000426447 SHOXO15266 292 aa11□□□□□ -0.65
PDAP1-202ENST00000426447 RBMXL2O75526 392 aaKnown RBP11□□□□□ -0.65
PDAP1-202ENST00000426447 DEDDO75618 318 aa11□□□□□ -0.65
PDAP1-202ENST00000426447 NDUFB8O95169 186 aa11□□□□□ -0.65
PDAP1-202ENST00000426447 IGLV2-23P01705 113 aa11□□□□□ -0.65
PDAP1-202ENST00000426447 CRYGBP07316 175 aa11□□□□□ -0.65
PDAP1-202ENST00000426447 HTR2CP28335 458 aa11□□□□□ -0.65
PDAP1-202ENST00000426447 RPS27AP62979 156 aaKnown RBP11□□□□□ -0.65
PDAP1-202ENST00000426447 TNXAQ16473 311 aa11□□□□□ -0.65
PDAP1-202ENST00000426447 FAM223AQ8IWN6 122 aa11□□□□□ -0.65
PDAP1-202ENST00000426447 ADAD2Q8NCV1 583 aaKnown RBP11□□□□□ -0.65
PDAP1-202ENST00000426447 OR52B4Q8NGK2 314 aa11□□□□□ -0.65
PDAP1-202ENST00000426447 PTX4Q96A99 478 aa11□□□□□ -0.65
PDAP1-202ENST00000426447 PGLYRP3Q96LB9 341 aa11□□□□□ -0.65
PDAP1-202ENST00000426447 DERL3Q96Q80 235 aa11□□□□□ -0.65
PDAP1-202ENST00000426447 TMEM59Q9BXS4 323 aa11□□□□□ -0.65
PDAP1-202ENST00000426447 MGAT4AQ9UM21 535 aa11□□□□□ -0.65
PDAP1-202ENST00000426447 SELENOKQ9Y6D0 94 aa11□□□□□ -0.65
PDAP1-202ENST00000426447 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.99□□□□□ -0.65
PDAP1-202ENST00000426447 PRH1P02810 166 aa10.99□□□□□ -0.65
PDAP1-202ENST00000426447 SCTP09683 121 aa10.99□□□□□ -0.65
PDAP1-202ENST00000426447 HLA-DRB3P79483 266 aa10.99□□□□□ -0.65
PDAP1-202ENST00000426447 KCNG3Q8TAE7 436 aa10.99□□□□□ -0.65
PDAP1-202ENST00000426447 NICN1Q9BSH3 213 aa10.99□□□□□ -0.65
PDAP1-202ENST00000426447 ZC4H2Q9NQZ6 224 aa10.99□□□□□ -0.65
PDAP1-202ENST00000426447 ZNF230Q9UIE0 474 aaPredicted RBP10.99□□□□□ -0.65
PDAP1-202ENST00000426447 DIMT1Q9UNQ2 313 aaKnown RBP10.99□□□□□ -0.65
PDAP1-202ENST00000426447 FRAS1Q86XX4 4008 aa10.98□□□□□ -0.65
PDAP1-202ENST00000426447 PPP5D1E7EU14 171 aa10.98□□□□□ -0.65
PDAP1-202ENST00000426447 OR2C1O95371 312 aa10.98□□□□□ -0.65
PDAP1-202ENST00000426447 EDN2P20800 178 aa10.98□□□□□ -0.65
PDAP1-202ENST00000426447 ANKRD55Q3KP44 614 aa10.98□□□□□ -0.65
PDAP1-202ENST00000426447 ZNF57Q68EA5 555 aaPredicted RBP10.98□□□□□ -0.65
PDAP1-202ENST00000426447 LYG2Q86SG7 212 aa10.98□□□□□ -0.65
PDAP1-202ENST00000426447 ACOT12Q8WYK0 555 aa10.98□□□□□ -0.65
PDAP1-202ENST00000426447 TMEM80Q96HE8 168 aa10.98□□□□□ -0.65
PDAP1-202ENST00000426447 HDHD3Q9BSH5 251 aaPredicted RBP10.98□□□□□ -0.65
PDAP1-202ENST00000426447 C9orf16Q9BUW7 83 aa10.98□□□□□ -0.65
PDAP1-202ENST00000426447 RDH8Q9NYR8 311 aa10.98□□□□□ -0.65
PDAP1-202ENST00000426447 AK3Q9UIJ7 227 aa10.98□□□□□ -0.65
PDAP1-202ENST00000426447 HERC2O95714 4834 aa10.97□□□□□ -0.65
PDAP1-202ENST00000426447 TRBV6-6A0A0A6YYG2 114 aa10.97□□□□□ -0.65
PDAP1-202ENST00000426447 SPRY2O43597 315 aa10.97□□□□□ -0.65
PDAP1-202ENST00000426447 GGCTO75223 188 aaKnown RBP10.97□□□□□ -0.65
PDAP1-202ENST00000426447 WBP4O75554 376 aaKnown RBP10.97□□□□□ -0.65
PDAP1-202ENST00000426447 ATP5HO75947 161 aa10.97□□□□□ -0.65
PDAP1-202ENST00000426447 HLA-AP01891 365 aaKnown RBP10.97□□□□□ -0.65
PDAP1-202ENST00000426447 CBLN1P23435 193 aa10.97□□□□□ -0.65
PDAP1-202ENST00000426447 MAPK3P27361 379 aaPredicted RBP10.97□□□□□ -0.65
PDAP1-202ENST00000426447 BMI1P35226 326 aa10.97□□□□□ -0.65
PDAP1-202ENST00000426447 TAS2R43P59537 309 aa10.97□□□□□ -0.65
PDAP1-202ENST00000426447 EWSR1Q01844 656 aaKnown RBP eCLIP10.97□□□□□ -0.65
PDAP1-202ENST00000426447 TAGLNQ01995 201 aaKnown RBP10.97□□□□□ -0.65
PDAP1-202ENST00000426447 TNFRSF9Q07011 255 aa10.97□□□□□ -0.65
PDAP1-202ENST00000426447 RTL8BQ17RB0 113 aa10.97□□□□□ -0.65
PDAP1-202ENST00000426447 VMA21Q3ZAQ7 101 aa10.97□□□□□ -0.65
PDAP1-202ENST00000426447 FAM209BQ5JX69 171 aa10.97□□□□□ -0.65
PDAP1-202ENST00000426447 GLT8D1Q68CQ7 371 aa10.97□□□□□ -0.65
PDAP1-202ENST00000426447 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.97□□□□□ -0.65
PDAP1-202ENST00000426447 NECAP1Q8NC96 275 aa10.97□□□□□ -0.65
PDAP1-202ENST00000426447 ZNF555Q8NEP9 628 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms