RNA–Protein interactions for RNA: ENST00000424804.6

VRK3-203, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,061 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-203ENST00000424804 ITGB1BP1O14713 200 aa10.12□□□□□ -0.79
VRK3-203ENST00000424804 NBR2O15453 112 aa10.12□□□□□ -0.79
VRK3-203ENST00000424804 SSX5O60225 188 aa10.12□□□□□ -0.79
VRK3-203ENST00000424804 APOA2P02652 100 aa10.12□□□□□ -0.79
VRK3-203ENST00000424804 TFAP2AP05549 437 aa10.12□□□□□ -0.79
VRK3-203ENST00000424804 NFYAP23511 347 aaPredicted RBP10.12□□□□□ -0.79
VRK3-203ENST00000424804 CDX1P47902 265 aaPredicted RBP10.12□□□□□ -0.79
VRK3-203ENST00000424804 SCAND1P57086 179 aa10.12□□□□□ -0.79
VRK3-203ENST00000424804 ARPC4P59998 168 aa10.12□□□□□ -0.79
VRK3-203ENST00000424804 UBE2NLQ5JXB2 153 aa10.12□□□□□ -0.79
VRK3-203ENST00000424804 GPR107Q5VW38 600 aa10.12□□□□□ -0.79
VRK3-203ENST00000424804 TEX38Q6PEX7 206 aa10.12□□□□□ -0.79
VRK3-203ENST00000424804 MYOZ3Q8TDC0 251 aa10.12□□□□□ -0.79
VRK3-203ENST00000424804 ABHD5Q8WTS1 349 aa10.12□□□□□ -0.79
VRK3-203ENST00000424804 S100A16Q96FQ6 103 aaKnown RBP10.12□□□□□ -0.79
VRK3-203ENST00000424804 WWC2-AS2Q96NR7 200 aa10.12□□□□□ -0.79
VRK3-203ENST00000424804 CLCC1Q96S66 551 aa10.12□□□□□ -0.79
VRK3-203ENST00000424804 MRPS26Q9BYN8 205 aaKnown RBP10.12□□□□□ -0.79
VRK3-203ENST00000424804 NAA50Q9GZZ1 169 aaKnown RBP10.12□□□□□ -0.79
VRK3-203ENST00000424804 GHITMQ9H3K2 345 aa10.12□□□□□ -0.79
VRK3-203ENST00000424804 PARP11Q9NR21 331 aa10.12□□□□□ -0.79
VRK3-203ENST00000424804 COMMD3Q9UBI1 195 aa10.12□□□□□ -0.79
VRK3-203ENST00000424804 WASHC3Q9Y3C0 194 aa10.12□□□□□ -0.79
VRK3-203ENST00000424804 SORL1Q92673 2214 aa10.11□□□□□ -0.79
VRK3-203ENST00000424804 NUDT19A8MXV4 375 aa10.11□□□□□ -0.79
VRK3-203ENST00000424804 H0YJW9 148 aa10.11□□□□□ -0.79
VRK3-203ENST00000424804 IGHG4P01861 327 aa10.11□□□□□ -0.79
VRK3-203ENST00000424804 VDAC1P21796 283 aa10.11□□□□□ -0.79
VRK3-203ENST00000424804 MC5RP33032 325 aa10.11□□□□□ -0.79
VRK3-203ENST00000424804 LUMP51884 338 aaPredicted RBP10.11□□□□□ -0.79
VRK3-203ENST00000424804 RPS16P62249 146 aaKnown RBP10.11□□□□□ -0.79
VRK3-203ENST00000424804 DGCR2P98153 550 aa10.11□□□□□ -0.79
VRK3-203ENST00000424804 CD69Q07108 199 aa10.11□□□□□ -0.79
VRK3-203ENST00000424804 FOXE3Q13461 319 aa10.11□□□□□ -0.79
VRK3-203ENST00000424804 FHL3Q13643 280 aa10.11□□□□□ -0.79
VRK3-203ENST00000424804 GPR141Q7Z602 305 aa10.11□□□□□ -0.79
VRK3-203ENST00000424804 GVQW1Q8N7I0 195 aa10.11□□□□□ -0.79
VRK3-203ENST00000424804 SLC25A46Q96AG3 418 aa10.11□□□□□ -0.79
VRK3-203ENST00000424804 DCSTAMPQ9H295 470 aa10.11□□□□□ -0.79
VRK3-203ENST00000424804 FBXL15Q9H469 300 aa10.11□□□□□ -0.79
VRK3-203ENST00000424804 SLC35D1Q9NTN3 355 aa10.11□□□□□ -0.79
VRK3-203ENST00000424804 SDHAF2Q9NX18 166 aa10.11□□□□□ -0.79
VRK3-203ENST00000424804 IGF1P05019 195 aa10.1□□□□□ -0.79
VRK3-203ENST00000424804 ELANEP08246 267 aa10.1□□□□□ -0.79
VRK3-203ENST00000424804 PSMB8P28062 276 aa10.1□□□□□ -0.79
VRK3-203ENST00000424804 PPIFP30405 207 aaKnown RBP10.1□□□□□ -0.79
VRK3-203ENST00000424804 CBX3Q13185 183 aa10.1□□□□□ -0.79
VRK3-203ENST00000424804 SRSF7Q16629 238 aaKnown RBP eCLIP10.1□□□□□ -0.79
VRK3-203ENST00000424804 C5orf64Q2M2E5 130 aa10.1□□□□□ -0.79
VRK3-203ENST00000424804 TMEM69Q5SWH9 247 aa10.1□□□□□ -0.79
VRK3-203ENST00000424804 ASPHD1Q5U4P2 390 aa10.1□□□□□ -0.79
VRK3-203ENST00000424804 LIN54Q6MZP7 749 aa10.1□□□□□ -0.79
VRK3-203ENST00000424804 Q6ZS49 121 aa10.1□□□□□ -0.79
VRK3-203ENST00000424804 H1FOOQ8IZA3 346 aaPredicted RBP10.1□□□□□ -0.79
VRK3-203ENST00000424804 ZNF383Q8NA42 475 aa10.1□□□□□ -0.79
VRK3-203ENST00000424804 BEST4Q8NFU0 473 aa10.1□□□□□ -0.79
VRK3-203ENST00000424804 AUNIPQ9H7T9 357 aa10.1□□□□□ -0.79
VRK3-203ENST00000424804 IFT46Q9NQC8 304 aa10.1□□□□□ -0.79
VRK3-203ENST00000424804 ANXA10Q9UJ72 324 aa10.1□□□□□ -0.79
VRK3-203ENST00000424804 ZNF580Q9UK33 172 aa10.1□□□□□ -0.79
VRK3-203ENST00000424804 WSB1Q9Y6I7 421 aa10.1□□□□□ -0.79
VRK3-203ENST00000424804 A3GALT2U3KPV4 340 aa10.1□□□□□ -0.79
VRK3-203ENST00000424804 A0A0A6YYH2 397 aa10.09□□□□□ -0.79
VRK3-203ENST00000424804 A6NJ64 397 aa10.09□□□□□ -0.79
VRK3-203ENST00000424804 RRHO14718 337 aa10.09□□□□□ -0.79
VRK3-203ENST00000424804 TMEM127O75204 238 aa10.09□□□□□ -0.79
VRK3-203ENST00000424804 PROP1O75360 226 aa10.09□□□□□ -0.79
VRK3-203ENST00000424804 CTXN2P0C2S0 81 aa10.09□□□□□ -0.79
VRK3-203ENST00000424804 ECSCRQ19T08 205 aa10.09□□□□□ -0.79
VRK3-203ENST00000424804 CNIH2Q6PI25 160 aa10.09□□□□□ -0.79
VRK3-203ENST00000424804 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.09□□□□□ -0.79
VRK3-203ENST00000424804 BVESQ8NE79 360 aa10.09□□□□□ -0.79
VRK3-203ENST00000424804 OR5AN1Q8NGI8 311 aa10.09□□□□□ -0.79
VRK3-203ENST00000424804 DPF1Q92782 380 aa10.09□□□□□ -0.79
VRK3-203ENST00000424804 PRR25Q96S07 402 aa10.09□□□□□ -0.79
VRK3-203ENST00000424804 GON7Q9BXV9 100 aa10.09□□□□□ -0.79
VRK3-203ENST00000424804 KLK15Q9H2R5 256 aa10.09□□□□□ -0.79
VRK3-203ENST00000424804 METTL1Q9UBP6 276 aaKnown RBP10.09□□□□□ -0.79
VRK3-203ENST00000424804 MRPS7Q9Y2R9 242 aaKnown RBP10.09□□□□□ -0.79
VRK3-203ENST00000424804 FAM25AB3EWG3 89 aa10.08□□□□□ -0.8
VRK3-203ENST00000424804 FAM25CB3EWG5 89 aa10.08□□□□□ -0.8
VRK3-203ENST00000424804 FAM25GB3EWG6 89 aa10.08□□□□□ -0.8
VRK3-203ENST00000424804 I3L521 148 aa10.08□□□□□ -0.8
VRK3-203ENST00000424804 ATP6V0E1O15342 81 aa10.08□□□□□ -0.8
VRK3-203ENST00000424804 XRCC3O43542 346 aa10.08□□□□□ -0.8
VRK3-203ENST00000424804 RAMP3O60896 148 aa10.08□□□□□ -0.8
VRK3-203ENST00000424804 RBBP9O75884 186 aa10.08□□□□□ -0.8
VRK3-203ENST00000424804 TUSC2O75896 110 aa10.08□□□□□ -0.8
VRK3-203ENST00000424804 DIRAS3O95661 229 aa10.08□□□□□ -0.8
VRK3-203ENST00000424804 IGKV1-16P04430 117 aa10.08□□□□□ -0.8
VRK3-203ENST00000424804 EIF4EP06730 217 aaKnown RBP10.08□□□□□ -0.8
VRK3-203ENST00000424804 RORCP51449 518 aa10.08□□□□□ -0.8
VRK3-203ENST00000424804 TAS2R20P59543 309 aa10.08□□□□□ -0.8
VRK3-203ENST00000424804 ANKRD13BQ86YJ7 626 aa10.08□□□□□ -0.8
VRK3-203ENST00000424804 CLVS1Q8IUQ0 354 aaPredicted RBP10.08□□□□□ -0.8
VRK3-203ENST00000424804 NPBQ8NG41 125 aa10.08□□□□□ -0.8
VRK3-203ENST00000424804 FLYWCH2Q96CP2 140 aaKnown RBP10.08□□□□□ -0.8
VRK3-203ENST00000424804 C5orf30Q96GV9 206 aa10.08□□□□□ -0.8
VRK3-203ENST00000424804 TSNAXQ99598 290 aaKnown RBP10.08□□□□□ -0.8
VRK3-203ENST00000424804 LYSTQ99698 3801 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms