RNA–Protein interactions for RNA: ENST00000422797.5

LIMS1-207, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best)

Gene LIMS1, Length 1,544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-207ENST00000422797 GZMHP20718 246 aa9.26□□□□□ -0.93
LIMS1-207ENST00000422797 OR10J1P30954 320 aa9.26□□□□□ -0.93
LIMS1-207ENST00000422797 OPRK1P41145 380 aa9.26□□□□□ -0.93
LIMS1-207ENST00000422797 RANP62826 216 aaKnown RBP9.26□□□□□ -0.93
LIMS1-207ENST00000422797 PAFAH1B2P68402 229 aa9.26□□□□□ -0.93
LIMS1-207ENST00000422797 PAX5Q02548 391 aa9.26□□□□□ -0.93
LIMS1-207ENST00000422797 SRYQ05066 204 aa9.26□□□□□ -0.93
LIMS1-207ENST00000422797 P2RY6Q15077 328 aa9.26□□□□□ -0.93
LIMS1-207ENST00000422797 USF2Q15853 346 aaPredicted RBP9.26□□□□□ -0.93
LIMS1-207ENST00000422797 C9orf135Q5VTT2 229 aa9.26□□□□□ -0.93
LIMS1-207ENST00000422797 FBXW9Q5XUX1 488 aa9.26□□□□□ -0.93
LIMS1-207ENST00000422797 LINC01551Q86U37 167 aa9.26□□□□□ -0.93
LIMS1-207ENST00000422797 UBALD2Q8IYN6 164 aa9.26□□□□□ -0.93
LIMS1-207ENST00000422797 OR52E5Q8NH55 327 aa9.26□□□□□ -0.93
LIMS1-207ENST00000422797 WDYHV1Q96HA8 205 aa9.26□□□□□ -0.93
LIMS1-207ENST00000422797 OR2D2Q9H210 308 aa9.26□□□□□ -0.93
LIMS1-207ENST00000422797 FKBP11Q9NYL4 201 aa9.26□□□□□ -0.93
LIMS1-207ENST00000422797 KLF13Q9Y2Y9 288 aaPredicted RBP9.26□□□□□ -0.93
LIMS1-207ENST00000422797 TRAPPC1Q9Y5R8 145 aa9.26□□□□□ -0.93
LIMS1-207ENST00000422797 EYSQ5T1H1 3165 aa9.25□□□□□ -0.93
LIMS1-207ENST00000422797 PRUNE2Q8WUY3 3088 aa9.25□□□□□ -0.93
LIMS1-207ENST00000422797 KIR2DL5BA0A0G2JN68 375 aa9.25□□□□□ -0.93
LIMS1-207ENST00000422797 KIR2DL5BA0A0G2JPC4 375 aa9.25□□□□□ -0.93
LIMS1-207ENST00000422797 A0A1W2PPV4 95 aa9.25□□□□□ -0.93
LIMS1-207ENST00000422797 ZNF503-AS2A6NEH8 195 aa9.25□□□□□ -0.93
LIMS1-207ENST00000422797 IFNL4K9M1U5 179 aa9.25□□□□□ -0.93
LIMS1-207ENST00000422797 NEURL1O76050 574 aa9.25□□□□□ -0.93
LIMS1-207ENST00000422797 ADH4P08319 380 aa9.25□□□□□ -0.93
LIMS1-207ENST00000422797 JMJD7P0C870 316 aa9.25□□□□□ -0.93
LIMS1-207ENST00000422797 IL3RAP26951 378 aa9.25□□□□□ -0.93
LIMS1-207ENST00000422797 ERVFC1-1P60608 527 aa9.25□□□□□ -0.93
LIMS1-207ENST00000422797 YPEL3P61236 119 aaPredicted RBP9.25□□□□□ -0.93
LIMS1-207ENST00000422797 RPL15P61313 204 aaKnown RBP9.25□□□□□ -0.93
LIMS1-207ENST00000422797 NUTF2P61970 127 aaKnown RBP9.25□□□□□ -0.93
LIMS1-207ENST00000422797 TGFBR3Q03167 851 aa9.25□□□□□ -0.93
LIMS1-207ENST00000422797 MZT1Q08AG7 82 aa9.25□□□□□ -0.93
LIMS1-207ENST00000422797 COX19Q49B96 90 aa9.25□□□□□ -0.93
LIMS1-207ENST00000422797 PDLIM3Q53GG5 364 aaPredicted RBP9.25□□□□□ -0.93
LIMS1-207ENST00000422797 C1orf194Q5T5A4 169 aa9.25□□□□□ -0.93
LIMS1-207ENST00000422797 KIR2DL5AQ8N109 375 aa9.25□□□□□ -0.93
LIMS1-207ENST00000422797 PRR18Q8N4B5 295 aa9.25□□□□□ -0.93
LIMS1-207ENST00000422797 TMEM37Q8WXS4 190 aa9.25□□□□□ -0.93
LIMS1-207ENST00000422797 THOC3Q96J01 351 aaKnown RBP9.25□□□□□ -0.93
LIMS1-207ENST00000422797 TTTY12Q9BZ98 90 aa9.25□□□□□ -0.93
LIMS1-207ENST00000422797 PXMP4Q9Y6I8 212 aa9.25□□□□□ -0.93
LIMS1-207ENST00000422797 MUC3AQ02505 3323 aa9.24□□□□□ -0.93
LIMS1-207ENST00000422797 TRBV9A0A0B4J1U6 114 aa9.24□□□□□ -0.93
LIMS1-207ENST00000422797 C21orf140B9A014 251 aa9.24□□□□□ -0.93
LIMS1-207ENST00000422797 C12orf77C9JDV5 145 aa9.24□□□□□ -0.93
LIMS1-207ENST00000422797 M0R143 59 aa9.24□□□□□ -0.93
LIMS1-207ENST00000422797 RBFOX2O43251 390 aaKnown RBP eCLIP9.24□□□□□ -0.93
LIMS1-207ENST00000422797 GDF9O60383 454 aa9.24□□□□□ -0.93
LIMS1-207ENST00000422797 S1PR2O95136 353 aa9.24□□□□□ -0.93
LIMS1-207ENST00000422797 CXorf1O96002 111 aa9.24□□□□□ -0.93
LIMS1-207ENST00000422797 MT-CO3P00414 261 aa9.24□□□□□ -0.93
LIMS1-207ENST00000422797 KRASP01116 189 aa9.24□□□□□ -0.93
LIMS1-207ENST00000422797 ACP1P24666 158 aa9.24□□□□□ -0.93
LIMS1-207ENST00000422797 CD1BP29016 333 aa9.24□□□□□ -0.93
LIMS1-207ENST00000422797 G6PCP35575 357 aa9.24□□□□□ -0.93
LIMS1-207ENST00000422797 KIR2DS2P43631 304 aa9.24□□□□□ -0.93
LIMS1-207ENST00000422797 TMPRSS3P57727 454 aa9.24□□□□□ -0.93
LIMS1-207ENST00000422797 HTD2P86397 168 aa9.24□□□□□ -0.93
LIMS1-207ENST00000422797 ZNF766Q5HY98 468 aa9.24□□□□□ -0.93
LIMS1-207ENST00000422797 MDP1Q86V88 176 aa9.24□□□□□ -0.93
LIMS1-207ENST00000422797 ELOVL1Q9BW60 279 aa9.24□□□□□ -0.93
LIMS1-207ENST00000422797 CLN8Q9UBY8 286 aa9.24□□□□□ -0.93
LIMS1-207ENST00000422797 LOXL2Q9Y4K0 774 aa9.24□□□□□ -0.93
LIMS1-207ENST00000422797 KMT2EQ8IZD2 1858 aa9.24□□□□□ -0.93
LIMS1-207ENST00000422797 BRWD1Q9NSI6 2320 aa9.24□□□□□ -0.93
LIMS1-207ENST00000422797 A8MXE2 369 aa9.23□□□□□ -0.93
LIMS1-207ENST00000422797 C1QTNF9BB2RNN3 333 aa9.23□□□□□ -0.93
LIMS1-207ENST00000422797 TCAPO15273 167 aa9.23□□□□□ -0.93
LIMS1-207ENST00000422797 SPINT2O43291 252 aa9.23□□□□□ -0.93
LIMS1-207ENST00000422797 ZG16O60844 167 aa9.23□□□□□ -0.93
LIMS1-207ENST00000422797 SMPD2O60906 423 aa9.23□□□□□ -0.93
LIMS1-207ENST00000422797 HBZP02008 142 aa9.23□□□□□ -0.93
LIMS1-207ENST00000422797 ESDP10768 282 aa9.23□□□□□ -0.93
LIMS1-207ENST00000422797 OR3A1P47881 315 aa9.23□□□□□ -0.93
LIMS1-207ENST00000422797 SOX8P57073 446 aa9.23□□□□□ -0.93
LIMS1-207ENST00000422797 TPPP2P59282 170 aa9.23□□□□□ -0.93
LIMS1-207ENST00000422797 SELENOTP62341 195 aa9.23□□□□□ -0.93
LIMS1-207ENST00000422797 TFF3Q07654 80 aa9.23□□□□□ -0.93
LIMS1-207ENST00000422797 ZNF124Q15973 351 aa9.23□□□□□ -0.93
LIMS1-207ENST00000422797 FAM78BQ5VT40 261 aa9.23□□□□□ -0.93
LIMS1-207ENST00000422797 SPINK14Q6IE38 97 aa9.23□□□□□ -0.93
LIMS1-207ENST00000422797 C1orf174Q8IYL3 243 aa9.23□□□□□ -0.93
LIMS1-207ENST00000422797 TMEM251Q8N6I4 163 aa9.23□□□□□ -0.93
LIMS1-207ENST00000422797 MISP3Q96FF7 219 aa9.23□□□□□ -0.93
LIMS1-207ENST00000422797 SFRP2Q96HF1 295 aa9.23□□□□□ -0.93
LIMS1-207ENST00000422797 NEU1Q99519 415 aa9.23□□□□□ -0.93
LIMS1-207ENST00000422797 RAB9BQ9NP90 201 aa9.23□□□□□ -0.93
LIMS1-207ENST00000422797 NAGKQ9UJ70 344 aa9.23□□□□□ -0.93
LIMS1-207ENST00000422797 NCOR1O75376 2440 aa9.23□□□□□ -0.93
LIMS1-207ENST00000422797 MED12Q93074 2177 aa9.22□□□□□ -0.93
LIMS1-207ENST00000422797 A0A0U1RQK1 487 aa9.22□□□□□ -0.93
LIMS1-207ENST00000422797 ZNF320A2RRD8 509 aa9.22□□□□□ -0.93
LIMS1-207ENST00000422797 C15orf62A8K5M9 175 aa9.22□□□□□ -0.93
LIMS1-207ENST00000422797 KLRC4-KLRK1H3BQV0 150 aa9.22□□□□□ -0.93
LIMS1-207ENST00000422797 RAMP3O60896 148 aa9.22□□□□□ -0.93
LIMS1-207ENST00000422797 LILRA1O75019 489 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms