RNA–Protein interactions for RNA: ENST00000421340.5

ABCF3-202, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 690 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-202ENST00000421340 CDS2O95674 445 aa17.44■□□□□ 0.38
ABCF3-202ENST00000421340 AVPP01185 164 aa17.44■□□□□ 0.38
ABCF3-202ENST00000421340 RRASP10301 218 aa17.44■□□□□ 0.38
ABCF3-202ENST00000421340 RPA2P15927 270 aa17.44■□□□□ 0.38
ABCF3-202ENST00000421340 CBX3Q13185 183 aa17.44■□□□□ 0.38
ABCF3-202ENST00000421340 SLC9A3R2Q15599 337 aa17.44■□□□□ 0.38
ABCF3-202ENST00000421340 LIAT1Q6ZQX7 453 aa17.44■□□□□ 0.38
ABCF3-202ENST00000421340 OR51H1Q8NH63 302 aa17.44■□□□□ 0.38
ABCF3-202ENST00000421340 IL22RA2Q969J5 263 aa17.44■□□□□ 0.38
ABCF3-202ENST00000421340 RPEQ96AT9 228 aa17.44■□□□□ 0.38
ABCF3-202ENST00000421340 GPHA2Q96T91 129 aa17.44■□□□□ 0.38
ABCF3-202ENST00000421340 NABP2Q9BQ15 211 aa17.44■□□□□ 0.38
ABCF3-202ENST00000421340 ASH1LQ9NR48 2969 aaKnown RBP17.44■□□□□ 0.38
ABCF3-202ENST00000421340 MED13LQ71F56 2210 aa17.43■□□□□ 0.38
ABCF3-202ENST00000421340 A0A1B0GVG6 124 aa17.43■□□□□ 0.38
ABCF3-202ENST00000421340 CD5LO43866 347 aa17.43■□□□□ 0.38
ABCF3-202ENST00000421340 MC5RP33032 325 aa17.43■□□□□ 0.38
ABCF3-202ENST00000421340 SP6Q3SY56 376 aa17.43■□□□□ 0.38
ABCF3-202ENST00000421340 LDLRAD2Q5SZI1 272 aa17.43■□□□□ 0.38
ABCF3-202ENST00000421340 CCDC144NLQ6NUI1 221 aa17.43■□□□□ 0.38
ABCF3-202ENST00000421340 PDZD9Q8IXQ8 264 aa17.43■□□□□ 0.38
ABCF3-202ENST00000421340 LGI3Q8N145 548 aa17.43■□□□□ 0.38
ABCF3-202ENST00000421340 OR8H3Q8N146 312 aa17.43■□□□□ 0.38
ABCF3-202ENST00000421340 ZNF383Q8NA42 475 aa17.43■□□□□ 0.38
ABCF3-202ENST00000421340 CASTOR1Q8WTX7 329 aa17.43■□□□□ 0.38
ABCF3-202ENST00000421340 C18orf12Q96KH6 178 aa17.43■□□□□ 0.38
ABCF3-202ENST00000421340 CR1P17927 2039 aa17.42■□□□□ 0.38
ABCF3-202ENST00000421340 DBX1A6NMT0 343 aa17.42■□□□□ 0.38
ABCF3-202ENST00000421340 SERPINE2P07093 398 aa17.42■□□□□ 0.38
ABCF3-202ENST00000421340 BRWD1-AS2P59051 145 aa17.42■□□□□ 0.38
ABCF3-202ENST00000421340 DIAPH2-AS1Q14236 149 aa17.42■□□□□ 0.38
ABCF3-202ENST00000421340 ANKRD55Q3KP44 614 aa17.42■□□□□ 0.38
ABCF3-202ENST00000421340 ZNF585BQ52M93 769 aa17.42■□□□□ 0.38
ABCF3-202ENST00000421340 SPAG16Q8N0X2 631 aa17.42■□□□□ 0.38
ABCF3-202ENST00000421340 DRAXINQ8NBI3 349 aaPredicted RBP17.42■□□□□ 0.38
ABCF3-202ENST00000421340 CHAC2Q8WUX2 184 aa17.42■□□□□ 0.38
ABCF3-202ENST00000421340 MRPL20Q9BYC9 149 aaKnown RBP17.42■□□□□ 0.38
ABCF3-202ENST00000421340 VPS13CQ709C8 3753 aa17.42■□□□□ 0.38
ABCF3-202ENST00000421340 CCDC168Q8NDH2 2452 aa17.42■□□□□ 0.38
ABCF3-202ENST00000421340 IGHV1-3A0A0C4DH29 117 aa17.41■□□□□ 0.38
ABCF3-202ENST00000421340 SSNA1O43805 119 aa17.41■□□□□ 0.38
ABCF3-202ENST00000421340 FSHBP01225 129 aa17.41■□□□□ 0.38
ABCF3-202ENST00000421340 HLA-GP17693 338 aa17.41■□□□□ 0.38
ABCF3-202ENST00000421340 HABP2Q14520 560 aaPredicted RBP17.41■□□□□ 0.38
ABCF3-202ENST00000421340 KLF17Q5JT82 389 aaPredicted RBP17.41■□□□□ 0.38
ABCF3-202ENST00000421340 DHRS7BQ6IAN0 325 aaPredicted RBP17.41■□□□□ 0.38
ABCF3-202ENST00000421340 LHFPL4Q7Z7J7 247 aa17.41■□□□□ 0.38
ABCF3-202ENST00000421340 CADM3Q8N126 398 aa17.41■□□□□ 0.38
ABCF3-202ENST00000421340 PIP4P2Q8N4L2 257 aa17.41■□□□□ 0.38
ABCF3-202ENST00000421340 AJUBAQ96IF1 538 aa17.41■□□□□ 0.38
ABCF3-202ENST00000421340 MED28Q9H204 178 aa17.41■□□□□ 0.38
ABCF3-202ENST00000421340 TRAV40A0A0B4J280 105 aa17.4■□□□□ 0.38
ABCF3-202ENST00000421340 DUXBA0A1W2PPF3 345 aa17.4■□□□□ 0.38
ABCF3-202ENST00000421340 A0A1W2PRD5 423 aa17.4■□□□□ 0.38
ABCF3-202ENST00000421340 A0A1W2PRF3 423 aa17.4■□□□□ 0.38
ABCF3-202ENST00000421340 A0A1W2PRM7 423 aa17.4■□□□□ 0.38
ABCF3-202ENST00000421340 H0YJW9 148 aa17.4■□□□□ 0.38
ABCF3-202ENST00000421340 HPRT1P00492 218 aa17.4■□□□□ 0.38
ABCF3-202ENST00000421340 APOA2P02652 100 aa17.4■□□□□ 0.38
ABCF3-202ENST00000421340 TRAPPC2P0DI81 140 aa17.4■□□□□ 0.38
ABCF3-202ENST00000421340 TRAPPC2BP0DI82 140 aa17.4■□□□□ 0.38
ABCF3-202ENST00000421340 FOSL1P15407 271 aa17.4■□□□□ 0.38
ABCF3-202ENST00000421340 SAA4P35542 130 aa17.4■□□□□ 0.38
ABCF3-202ENST00000421340 REG1BP48304 166 aa17.4■□□□□ 0.38
ABCF3-202ENST00000421340 LINC00205P59089 165 aa17.4■□□□□ 0.38
ABCF3-202ENST00000421340 RRAS2P62070 204 aaPredicted RBP17.4■□□□□ 0.38
ABCF3-202ENST00000421340 KRTAP1-1Q07627 177 aa17.4■□□□□ 0.38
ABCF3-202ENST00000421340 RTL8BQ17RB0 113 aa17.4■□□□□ 0.38
ABCF3-202ENST00000421340 OR4S2Q8NH73 311 aa17.4■□□□□ 0.38
ABCF3-202ENST00000421340 NANPQ8TBE9 248 aa17.4■□□□□ 0.38
ABCF3-202ENST00000421340 PLEKHA2Q9HB19 425 aa17.4■□□□□ 0.38
ABCF3-202ENST00000421340 A0A1W2PPI3 338 aa17.39■□□□□ 0.37
ABCF3-202ENST00000421340 HMX3A6NHT5 357 aa17.39■□□□□ 0.37
ABCF3-202ENST00000421340 FCGR3BO75015 233 aa17.39■□□□□ 0.37
ABCF3-202ENST00000421340 ATG12O94817 140 aa17.39■□□□□ 0.37
ABCF3-202ENST00000421340 IGHV4-38-2P0DP08 117 aa17.39■□□□□ 0.37
ABCF3-202ENST00000421340 CD1BP29016 333 aa17.39■□□□□ 0.37
ABCF3-202ENST00000421340 LPAR6P43657 344 aa17.39■□□□□ 0.37
ABCF3-202ENST00000421340 RAB13P51153 203 aa17.39■□□□□ 0.37
ABCF3-202ENST00000421340 BCAP31P51572 246 aa17.39■□□□□ 0.37
ABCF3-202ENST00000421340 PDPNQ86YL7 162 aa17.39■□□□□ 0.37
ABCF3-202ENST00000421340 ZNF695Q8IW36 515 aa17.39■□□□□ 0.37
ABCF3-202ENST00000421340 SELENOHQ8IZQ5 122 aaKnown RBP17.39■□□□□ 0.37
ABCF3-202ENST00000421340 RBPMSQ93062 196 aaKnown RBP17.39■□□□□ 0.37
ABCF3-202ENST00000421340 RAB18Q9NP72 206 aa17.39■□□□□ 0.37
ABCF3-202ENST00000421340 SLC35D1Q9NTN3 355 aa17.39■□□□□ 0.37
ABCF3-202ENST00000421340 WASHC3Q9Y3C0 194 aa17.39■□□□□ 0.37
ABCF3-202ENST00000421340 CSMD1Q96PZ7 3565 aa17.39■□□□□ 0.37
ABCF3-202ENST00000421340 BAHCC1Q9P281 2608 aa17.38■□□□□ 0.37
ABCF3-202ENST00000421340 RAMP3O60896 148 aa17.38■□□□□ 0.37
ABCF3-202ENST00000421340 ARHGDIBP52566 201 aa17.38■□□□□ 0.37
ABCF3-202ENST00000421340 SSX2Q16385 188 aa17.38■□□□□ 0.37
ABCF3-202ENST00000421340 AIFM2Q9BRQ8 373 aa17.38■□□□□ 0.37
ABCF3-202ENST00000421340 MEGF9Q9H1U4 602 aa17.38■□□□□ 0.37
ABCF3-202ENST00000421340 COMMD9Q9P000 198 aa17.38■□□□□ 0.37
ABCF3-202ENST00000421340 NUP50Q9UKX7 468 aa17.38■□□□□ 0.37
ABCF3-202ENST00000421340 HILPDAQ9Y5L2 63 aa17.38■□□□□ 0.37
ABCF3-202ENST00000421340 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP17.37■□□□□ 0.372e-7■■■■□ 25.3
ABCF3-202ENST00000421340 CREBBPQ92793 2442 aa17.37■□□□□ 0.37
ABCF3-202ENST00000421340 hCG_2014768A0A024R1R8 64 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms