RNA–Protein interactions for RNA: ENST00000416538.5

UBXN4-203, Transcript of UBX domain protein 4, humanhuman

TSL 5

Gene UBXN4, Length 1,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-203ENST00000416538 VAX1Q5SQQ9 334 aa11.68□□□□□ -0.54
UBXN4-203ENST00000416538 ZNF660Q6AZW8 331 aaPredicted RBP11.68□□□□□ -0.54
UBXN4-203ENST00000416538 OR4A4PQ8NGN8 299 aa11.68□□□□□ -0.54
UBXN4-203ENST00000416538 OR1N2Q8NGR9 330 aa11.68□□□□□ -0.54
UBXN4-203ENST00000416538 OR10R2Q8NGX6 335 aa11.68□□□□□ -0.54
UBXN4-203ENST00000416538 OR2D2Q9H210 308 aa11.68□□□□□ -0.54
UBXN4-203ENST00000416538 BLOC1S6Q9UL45 172 aa11.68□□□□□ -0.54
UBXN4-203ENST00000416538 STAB2Q8WWQ8 2551 aa11.68□□□□□ -0.54
UBXN4-203ENST00000416538 IGHV4OR15-8A0A075B7B6 117 aa11.67□□□□□ -0.54
UBXN4-203ENST00000416538 A0A087WW49 117 aa11.67□□□□□ -0.54
UBXN4-203ENST00000416538 TRBV6-7A0A0A0MS04 114 aa11.67□□□□□ -0.54
UBXN4-203ENST00000416538 BET1O15155 118 aa11.67□□□□□ -0.54
UBXN4-203ENST00000416538 SLC25A17O43808 307 aa11.67□□□□□ -0.54
UBXN4-203ENST00000416538 TFAP2AP05549 437 aa11.67□□□□□ -0.54
UBXN4-203ENST00000416538 RAB3BP20337 219 aa11.67□□□□□ -0.54
UBXN4-203ENST00000416538 MC5RP33032 325 aa11.67□□□□□ -0.54
UBXN4-203ENST00000416538 ECI1P42126 302 aa11.67□□□□□ -0.54
UBXN4-203ENST00000416538 CD69Q07108 199 aa11.67□□□□□ -0.54
UBXN4-203ENST00000416538 PLGLAQ15195 96 aa11.67□□□□□ -0.54
UBXN4-203ENST00000416538 MRGPRG-AS1Q2M3A8 158 aa11.67□□□□□ -0.54
UBXN4-203ENST00000416538 ZNF260Q3ZCT1 412 aa11.67□□□□□ -0.54
UBXN4-203ENST00000416538 UBE2UQ5VVX9 321 aa11.67□□□□□ -0.54
UBXN4-203ENST00000416538 TMEM65Q6PI78 240 aa11.67□□□□□ -0.54
UBXN4-203ENST00000416538 LFNGQ8NES3 379 aa11.67□□□□□ -0.54
UBXN4-203ENST00000416538 ABHD5Q8WTS1 349 aa11.67□□□□□ -0.54
UBXN4-203ENST00000416538 DCUN1D4Q92564 292 aa11.67□□□□□ -0.54
UBXN4-203ENST00000416538 SDHAF2Q9NX18 166 aa11.67□□□□□ -0.54
UBXN4-203ENST00000416538 ZNF221Q9UK13 617 aa11.67□□□□□ -0.54
UBXN4-203ENST00000416538 PDCD5O14737 125 aa11.66□□□□□ -0.54
UBXN4-203ENST00000416538 SPDEFO95238 335 aa11.66□□□□□ -0.54
UBXN4-203ENST00000416538 IGHV3-11P01762 117 aa11.66□□□□□ -0.54
UBXN4-203ENST00000416538 CRYGBP07316 175 aa11.66□□□□□ -0.54
UBXN4-203ENST00000416538 LGALS1P09382 135 aaKnown RBP11.66□□□□□ -0.54
UBXN4-203ENST00000416538 OR8U8P0C7N1 319 aa11.66□□□□□ -0.54
UBXN4-203ENST00000416538 OR8U9P0C7N5 309 aa11.66□□□□□ -0.54
UBXN4-203ENST00000416538 RAB6AP20340 208 aa11.66□□□□□ -0.54
UBXN4-203ENST00000416538 MYL9P24844 172 aa11.66□□□□□ -0.54
UBXN4-203ENST00000416538 PJVKQ0ZLH3 352 aa11.66□□□□□ -0.54
UBXN4-203ENST00000416538 UNQ5815/PRO19632Q6UWF5 114 aa11.66□□□□□ -0.54
UBXN4-203ENST00000416538 PPP1R27Q86WC6 154 aa11.66□□□□□ -0.54
UBXN4-203ENST00000416538 PDPNQ86YL7 162 aa11.66□□□□□ -0.54
UBXN4-203ENST00000416538 SPARTQ8N0X7 666 aa11.66□□□□□ -0.54
UBXN4-203ENST00000416538 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.66□□□□□ -0.54
UBXN4-203ENST00000416538 GHITMQ9H3K2 345 aa11.66□□□□□ -0.54
UBXN4-203ENST00000416538 SLC35D1Q9NTN3 355 aa11.66□□□□□ -0.54
UBXN4-203ENST00000416538 KMT2CQ8NEZ4 4911 aaKnown RBP11.65□□□□□ -0.54
UBXN4-203ENST00000416538 RAMP3O60896 148 aa11.65□□□□□ -0.54
UBXN4-203ENST00000416538 PSMD7P51665 324 aa11.65□□□□□ -0.54
UBXN4-203ENST00000416538 RPS16P62249 146 aaKnown RBP11.65□□□□□ -0.54
UBXN4-203ENST00000416538 DEFA5Q01523 94 aa11.65□□□□□ -0.54
UBXN4-203ENST00000416538 ACTBL2Q562R1 376 aa11.65□□□□□ -0.54
UBXN4-203ENST00000416538 TCTEX1D1Q8N7M0 179 aa11.65□□□□□ -0.54
UBXN4-203ENST00000416538 GRPEL2Q8TAA5 225 aa11.65□□□□□ -0.54
UBXN4-203ENST00000416538 ARPC1AQ92747 370 aa11.65□□□□□ -0.54
UBXN4-203ENST00000416538 DLX4Q92988 240 aaPredicted RBP11.65□□□□□ -0.54
UBXN4-203ENST00000416538 MS4A10Q96PG2 267 aa11.65□□□□□ -0.54
UBXN4-203ENST00000416538 RNF5Q99942 180 aa11.65□□□□□ -0.54
UBXN4-203ENST00000416538 TXNL4BQ9NX01 149 aaKnown RBP11.65□□□□□ -0.54
UBXN4-203ENST00000416538 HUWE1Q7Z6Z7 4374 aaKnown RBP11.65□□□□□ -0.54
UBXN4-203ENST00000416538 SRRM4A7MD48 611 aaKnown RBP11.64□□□□□ -0.55
UBXN4-203ENST00000416538 APOA2P02652 100 aa11.64□□□□□ -0.55
UBXN4-203ENST00000416538 GALP22466 123 aa11.64□□□□□ -0.55
UBXN4-203ENST00000416538 PSMB9P28065 219 aa11.64□□□□□ -0.55
UBXN4-203ENST00000416538 SERPINB10P48595 397 aa11.64□□□□□ -0.55
UBXN4-203ENST00000416538 ZNF562Q6V9R5 426 aa11.64□□□□□ -0.55
UBXN4-203ENST00000416538 Q6ZS49 121 aa11.64□□□□□ -0.55
UBXN4-203ENST00000416538 H1FOOQ8IZA3 346 aaPredicted RBP11.64□□□□□ -0.55
UBXN4-203ENST00000416538 DDB2Q92466 427 aa11.64□□□□□ -0.55
UBXN4-203ENST00000416538 TSNAXQ99598 290 aaKnown RBP11.64□□□□□ -0.55
UBXN4-203ENST00000416538 TENM3Q9P273 2699 aa11.63□□□□□ -0.55
UBXN4-203ENST00000416538 LINC00473A8K010 186 aa11.63□□□□□ -0.55
UBXN4-203ENST00000416538 OVOL1O14753 267 aa11.63□□□□□ -0.55
UBXN4-203ENST00000416538 RBMXL2O75526 392 aaKnown RBP11.63□□□□□ -0.55
UBXN4-203ENST00000416538 DIRAS3O95661 229 aa11.63□□□□□ -0.55
UBXN4-203ENST00000416538 GADD45AP24522 165 aa11.63□□□□□ -0.55
UBXN4-203ENST00000416538 FGF9P31371 208 aaPredicted RBP11.63□□□□□ -0.55
UBXN4-203ENST00000416538 TPPP2P59282 170 aa11.63□□□□□ -0.55
UBXN4-203ENST00000416538 FXYD3Q14802 87 aa11.63□□□□□ -0.55
UBXN4-203ENST00000416538 AKIRIN2Q53H80 203 aa11.63□□□□□ -0.55
UBXN4-203ENST00000416538 BVESQ8NE79 360 aa11.63□□□□□ -0.55
UBXN4-203ENST00000416538 OR10J5Q8NHC4 309 aa11.63□□□□□ -0.55
UBXN4-203ENST00000416538 LGALS14Q8TCE9 139 aa11.63□□□□□ -0.55
UBXN4-203ENST00000416538 NUDCD2Q8WVJ2 157 aa11.63□□□□□ -0.55
UBXN4-203ENST00000416538 FLYWCH2Q96CP2 140 aaKnown RBP11.63□□□□□ -0.55
UBXN4-203ENST00000416538 HARBI1Q96MB7 349 aa11.63□□□□□ -0.55
UBXN4-203ENST00000416538 RNF167Q9H6Y7 350 aa11.63□□□□□ -0.55
UBXN4-203ENST00000416538 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.63□□□□□ -0.55
UBXN4-203ENST00000416538 ZNF256Q9Y2P7 627 aaPredicted RBP11.63□□□□□ -0.55
UBXN4-203ENST00000416538 LINC01619G3V211 115 aa11.62□□□□□ -0.55
UBXN4-203ENST00000416538 MRPS14O60783 128 aaKnown RBP11.62□□□□□ -0.55
UBXN4-203ENST00000416538 CLEC2LP0C7M8 214 aa11.62□□□□□ -0.55
UBXN4-203ENST00000416538 MRPS15P82914 257 aaKnown RBP11.62□□□□□ -0.55
UBXN4-203ENST00000416538 ARFRP1Q13795 201 aa11.62□□□□□ -0.55
UBXN4-203ENST00000416538 TMEM177Q53S58 311 aa11.62□□□□□ -0.55
UBXN4-203ENST00000416538 HAPLN4Q86UW8 402 aa11.62□□□□□ -0.55
UBXN4-203ENST00000416538 RHOVQ96L33 236 aa11.62□□□□□ -0.55
UBXN4-203ENST00000416538 ATG5Q9H1Y0 275 aa11.62□□□□□ -0.55
UBXN4-203ENST00000416538 OR51E2Q9H255 320 aa11.62□□□□□ -0.55
UBXN4-203ENST00000416538 STUB1Q9UNE7 303 aa11.62□□□□□ -0.55
UBXN4-203ENST00000416538 NBEAL2Q6ZNJ1 2754 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms