RNA–Protein interactions for RNA: ENST00000415298.5

AP1S3-205, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 1 (best)

Gene AP1S3, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-205ENST00000415298 OR5H2Q8NGV7 314 aa17.35■□□□□ 0.37
AP1S3-205ENST00000415298 ZNRF4Q8WWF5 429 aa17.35■□□□□ 0.37
AP1S3-205ENST00000415298 ZDHHC11Q9H8X9 412 aa17.35■□□□□ 0.37
AP1S3-205ENST00000415298 SFTPDP35247 375 aa17.34■□□□□ 0.37
AP1S3-205ENST00000415298 OPRM1P35372 400 aa17.34■□□□□ 0.37
AP1S3-205ENST00000415298 EWSR1Q01844 656 aaKnown RBP eCLIP17.34■□□□□ 0.37
AP1S3-205ENST00000415298 MFGE8Q08431 387 aaPredicted RBP17.34■□□□□ 0.37
AP1S3-205ENST00000415298 MRPL24Q96A35 216 aaKnown RBP17.34■□□□□ 0.37
AP1S3-205ENST00000415298 RTN4RQ9BZR6 473 aa17.34■□□□□ 0.37
AP1S3-205ENST00000415298 KLHL13Q9P2N7 655 aa17.34■□□□□ 0.37
AP1S3-205ENST00000415298 IGF2RP11717 2491 aa17.34■□□□□ 0.37
AP1S3-205ENST00000415298 HIST1H1CP16403 213 aaKnown RBP17.34■□□□□ 0.37
AP1S3-205ENST00000415298 FBXW4P57775 412 aa17.34■□□□□ 0.37
AP1S3-205ENST00000415298 POU3F1Q03052 451 aaPredicted RBP17.34■□□□□ 0.37
AP1S3-205ENST00000415298 Q0VG73 95 aa17.34■□□□□ 0.37
AP1S3-205ENST00000415298 FAM78BQ5VT40 261 aa17.34■□□□□ 0.37
AP1S3-205ENST00000415298 STUMQ69YW2 141 aa17.34■□□□□ 0.37
AP1S3-205ENST00000415298 OR10V1Q8NGI7 309 aa17.34■□□□□ 0.37
AP1S3-205ENST00000415298 OR6K6Q8NGW6 343 aa17.34■□□□□ 0.37
AP1S3-205ENST00000415298 HHLA2Q9UM44 414 aa17.34■□□□□ 0.37
AP1S3-205ENST00000415298 TRAV9-2A0A087WT02 112 aa17.33■□□□□ 0.36
AP1S3-205ENST00000415298 C1QTNF9BB2RNN3 333 aa17.33■□□□□ 0.36
AP1S3-205ENST00000415298 IFNA5P01569 189 aa17.33■□□□□ 0.36
AP1S3-205ENST00000415298 OR10P1Q8NGE3 313 aa17.33■□□□□ 0.36
AP1S3-205ENST00000415298 OR13G1Q8NGZ3 307 aa17.33■□□□□ 0.36
AP1S3-205ENST00000415298 RAB1CQ92928 201 aa17.33■□□□□ 0.36
AP1S3-205ENST00000415298 EMG1Q92979 244 aaKnown RBP17.33■□□□□ 0.36
AP1S3-205ENST00000415298 ZNF665Q9H7R5 613 aa17.33■□□□□ 0.36
AP1S3-205ENST00000415298 EML6Q6ZMW3 1958 aa17.33■□□□□ 0.36
AP1S3-205ENST00000415298 A0A1W2PR80 420 aa17.32■□□□□ 0.36
AP1S3-205ENST00000415298 PITX3O75364 302 aa17.32■□□□□ 0.36
AP1S3-205ENST00000415298 ABHD16AO95870 558 aa17.32■□□□□ 0.36
AP1S3-205ENST00000415298 RRADP55042 308 aa17.32■□□□□ 0.36
AP1S3-205ENST00000415298 PLAURQ03405 335 aa17.32■□□□□ 0.36
AP1S3-205ENST00000415298 LHFPL1Q86WI0 220 aa17.32■□□□□ 0.36
AP1S3-205ENST00000415298 GATSQ8NAP1 163 aa17.32■□□□□ 0.36
AP1S3-205ENST00000415298 CEBPZOSA8MTT3 80 aa17.32■□□□□ 0.36
AP1S3-205ENST00000415298 ID1P41134 155 aa17.32■□□□□ 0.36
AP1S3-205ENST00000415298 PPP1CBP62140 327 aa17.32■□□□□ 0.36
AP1S3-205ENST00000415298 ADIPOQQ15848 244 aa17.32■□□□□ 0.36
AP1S3-205ENST00000415298 CPEB4Q17RY0 729 aaKnown RBP eCLIP17.32■□□□□ 0.36
AP1S3-205ENST00000415298 RPS19BP1Q86WX3 136 aaKnown RBP17.32■□□□□ 0.36
AP1S3-205ENST00000415298 BLNKQ8WV28 456 aa17.32■□□□□ 0.36
AP1S3-205ENST00000415298 NPFFR1Q9GZQ6 430 aa17.32■□□□□ 0.36
AP1S3-205ENST00000415298 C17orf112F2Z3M2 114 aa17.31■□□□□ 0.36
AP1S3-205ENST00000415298 TNFSF12O43508 249 aa17.31■□□□□ 0.36
AP1S3-205ENST00000415298 REG1AP05451 166 aa17.31■□□□□ 0.36
AP1S3-205ENST00000415298 AESQ08117 197 aa17.31■□□□□ 0.36
AP1S3-205ENST00000415298 CD226Q15762 336 aa17.31■□□□□ 0.36
AP1S3-205ENST00000415298 FAM46BQ96A09 425 aa17.31■□□□□ 0.36
AP1S3-205ENST00000415298 YAE1D1Q9NRH1 226 aa17.31■□□□□ 0.36
AP1S3-205ENST00000415298 ZNF443Q9Y2A4 671 aaPredicted RBP17.31■□□□□ 0.36
AP1S3-205ENST00000415298 B3GALT5Q9Y2C3 310 aa17.31■□□□□ 0.36
AP1S3-205ENST00000415298 PCNX3Q9H6A9 2034 aa17.31■□□□□ 0.36
AP1S3-205ENST00000415298 BOD1L1Q8NFC6 3051 aa17.31■□□□□ 0.36
AP1S3-205ENST00000415298 CHD8Q9HCK8 2581 aa17.31■□□□□ 0.36
AP1S3-205ENST00000415298 NPIPA5E9PKD4 350 aa17.31■□□□□ 0.36
AP1S3-205ENST00000415298 NPIPA3F8WFD2 350 aa17.31■□□□□ 0.36
AP1S3-205ENST00000415298 ARPC3O15145 178 aa17.31■□□□□ 0.36
AP1S3-205ENST00000415298 UTS2O95399 124 aa17.31■□□□□ 0.36
AP1S3-205ENST00000415298 C3orf79P0CE67 100 aa17.31■□□□□ 0.36
AP1S3-205ENST00000415298 ZNF787Q6DD87 383 aa17.31■□□□□ 0.36
AP1S3-205ENST00000415298 SPATA25Q9BR10 227 aa17.31■□□□□ 0.36
AP1S3-205ENST00000415298 NPIPA1Q9UND3 350 aa17.31■□□□□ 0.36
AP1S3-205ENST00000415298 P2RY10O00398 339 aa17.3■□□□□ 0.36
AP1S3-205ENST00000415298 MRPL2Q5T653 305 aaKnown RBP17.3■□□□□ 0.36
AP1S3-205ENST00000415298 RBM24Q9BX46 236 aaKnown RBP17.3■□□□□ 0.36
AP1S3-205ENST00000415298 CGAP01215 116 aa17.3■□□□□ 0.36
AP1S3-205ENST00000415298 ASPHD2Q6ICH7 369 aa17.3■□□□□ 0.36
AP1S3-205ENST00000415298 OR4A5Q8NH83 315 aa17.3■□□□□ 0.36
AP1S3-205ENST00000415298 TNFRSF13CQ96RJ3 184 aa17.3■□□□□ 0.36
AP1S3-205ENST00000415298 TSSC4Q9Y5U2 329 aaPredicted RBP17.3■□□□□ 0.36
AP1S3-205ENST00000415298 CACNA1AO00555 2505 aa17.3■□□□□ 0.36
AP1S3-205ENST00000415298 WNT2P09544 360 aa17.29■□□□□ 0.36
AP1S3-205ENST00000415298 H2BFMP0C1H6 154 aa17.29■□□□□ 0.36
AP1S3-205ENST00000415298 ATOH7Q8N100 152 aa17.29■□□□□ 0.36
AP1S3-205ENST00000415298 EXPH5Q8NEV8 1989 aa17.29■□□□□ 0.36
AP1S3-205ENST00000415298 ZZEF1O43149 2961 aa17.29■□□□□ 0.36
AP1S3-205ENST00000415298 ZNF207O43670 478 aaKnown RBP17.29■□□□□ 0.36
AP1S3-205ENST00000415298 DBIP07108 87 aaKnown RBP17.29■□□□□ 0.36
AP1S3-205ENST00000415298 GATA3P23771 443 aa17.29■□□□□ 0.36
AP1S3-205ENST00000415298 NPBWR2P48146 333 aa17.29■□□□□ 0.36
AP1S3-205ENST00000415298 ALG10Q5BKT4 473 aa17.29■□□□□ 0.36
AP1S3-205ENST00000415298 MARCH3Q86UD3 253 aa17.29■□□□□ 0.36
AP1S3-205ENST00000415298 HARBI1Q96MB7 349 aa17.29■□□□□ 0.36
AP1S3-205ENST00000415298 MRPL16Q9NX20 251 aaKnown RBP17.29■□□□□ 0.36
AP1S3-205ENST00000415298 MED31Q9Y3C7 131 aa17.29■□□□□ 0.36
AP1S3-205ENST00000415298 ATMQ13315 3056 aa17.29■□□□□ 0.36
AP1S3-205ENST00000415298 K7EP34 96 aa17.28■□□□□ 0.36
AP1S3-205ENST00000415298 ST8SIA3O43173 380 aa17.28■□□□□ 0.36
AP1S3-205ENST00000415298 IFNA1P01562 189 aa17.28■□□□□ 0.36
AP1S3-205ENST00000415298 AMTP48728 403 aa17.28■□□□□ 0.36
AP1S3-205ENST00000415298 FOXL1Q12952 345 aa17.28■□□□□ 0.36
AP1S3-205ENST00000415298 ZNF141Q15928 474 aa17.28■□□□□ 0.36
AP1S3-205ENST00000415298 C1QL3Q5VWW1 255 aa17.28■□□□□ 0.36
AP1S3-205ENST00000415298 OR2M3Q8NG83 312 aa17.28■□□□□ 0.36
AP1S3-205ENST00000415298 NEUROG1Q92886 237 aa17.28■□□□□ 0.36
AP1S3-205ENST00000415298 CENPMQ9NSP4 180 aa17.28■□□□□ 0.36
AP1S3-205ENST00000415298 ANAPC10Q9UM13 185 aa17.28■□□□□ 0.36
AP1S3-205ENST00000415298 FAM231BA6NCW3 169 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms