RNA–Protein interactions for RNA: ENST00000414700.7

SHMT2-202, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 2,006 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-202ENST00000414700 TMEM30CPA0ZSE6 113 aa12.84□□□□□ -0.35
SHMT2-202ENST00000414700 NDUFB7P17568 137 aa12.84□□□□□ -0.35
SHMT2-202ENST00000414700 MAS1LP35410 378 aa12.84□□□□□ -0.35
SHMT2-202ENST00000414700 RHEBQ15382 184 aa12.84□□□□□ -0.35
SHMT2-202ENST00000414700 PYY3Q5JQD4 70 aa12.84□□□□□ -0.35
SHMT2-202ENST00000414700 SSX9Q7RTT3 188 aa12.84□□□□□ -0.35
SHMT2-202ENST00000414700 ZNF383Q8NA42 475 aa12.84□□□□□ -0.35
SHMT2-202ENST00000414700 MRGPRDQ8TDS7 321 aa12.84□□□□□ -0.35
SHMT2-202ENST00000414700 C14orf144Q96I85 54 aa12.84□□□□□ -0.35
SHMT2-202ENST00000414700 TAF9BQ9HBM6 251 aa12.84□□□□□ -0.35
SHMT2-202ENST00000414700 MBNL3Q9NUK0 354 aaKnown RBP12.84□□□□□ -0.35
SHMT2-202ENST00000414700 ABCA2Q9BZC7 2435 aa12.83□□□□□ -0.35
SHMT2-202ENST00000414700 A0A1B0GV90 55 aa12.83□□□□□ -0.36
SHMT2-202ENST00000414700 M0R036 132 aa12.83□□□□□ -0.36
SHMT2-202ENST00000414700 LY86O95711 162 aa12.83□□□□□ -0.36
SHMT2-202ENST00000414700 OR2B8PP59922 312 aa12.83□□□□□ -0.36
SHMT2-202ENST00000414700 PAX5Q02548 391 aa12.83□□□□□ -0.36
SHMT2-202ENST00000414700 HERPUD1Q15011 391 aa12.83□□□□□ -0.36
SHMT2-202ENST00000414700 ZNF841Q6ZN19 808 aa12.83□□□□□ -0.36
SHMT2-202ENST00000414700 PPP1R35Q8TAP8 253 aa12.83□□□□□ -0.36
SHMT2-202ENST00000414700 FAM234AQ9H0X4 552 aa12.83□□□□□ -0.36
SHMT2-202ENST00000414700 RIMS4Q9H426 269 aaPredicted RBP12.83□□□□□ -0.36
SHMT2-202ENST00000414700 ZNF286AQ9HBT8 521 aa12.83□□□□□ -0.36
SHMT2-202ENST00000414700 GFOD1Q9NXC2 390 aa12.83□□□□□ -0.36
SHMT2-202ENST00000414700 OR5AC2Q9NZP5 309 aa12.83□□□□□ -0.36
SHMT2-202ENST00000414700 IGKV1-6A0A0C4DH72 117 aa12.83□□□□□ -0.36
SHMT2-202ENST00000414700 ODAMA1E959 279 aa12.83□□□□□ -0.36
SHMT2-202ENST00000414700 IFNA2P01563 188 aa12.83□□□□□ -0.36
SHMT2-202ENST00000414700 RPS2P15880 293 aaKnown RBP12.83□□□□□ -0.36
SHMT2-202ENST00000414700 S100A2P29034 98 aa12.83□□□□□ -0.36
SHMT2-202ENST00000414700 SSTR5P35346 364 aa12.83□□□□□ -0.36
SHMT2-202ENST00000414700 CDX1P47902 265 aaPredicted RBP12.83□□□□□ -0.36
SHMT2-202ENST00000414700 CHRFAM7AQ494W8 412 aa12.83□□□□□ -0.36
SHMT2-202ENST00000414700 Q6ZRG5 221 aa12.83□□□□□ -0.36
SHMT2-202ENST00000414700 TCF23Q7RTU1 214 aa12.83□□□□□ -0.36
SHMT2-202ENST00000414700 FAM24BQ8N5W8 94 aa12.83□□□□□ -0.36
SHMT2-202ENST00000414700 COMMD1Q8N668 190 aa12.83□□□□□ -0.36
SHMT2-202ENST00000414700 OR5D13Q8NGL4 314 aa12.83□□□□□ -0.36
SHMT2-202ENST00000414700 LYPD6BQ8NI32 183 aa12.83□□□□□ -0.36
SHMT2-202ENST00000414700 RAB18Q9NP72 206 aa12.83□□□□□ -0.36
SHMT2-202ENST00000414700 AKAP9Q99996 3911 aa12.82□□□□□ -0.36
SHMT2-202ENST00000414700 SLC31A2O15432 143 aa12.82□□□□□ -0.36
SHMT2-202ENST00000414700 OR8U9P0C7N5 309 aa12.82□□□□□ -0.36
SHMT2-202ENST00000414700 PET100P0DJ07 73 aa12.82□□□□□ -0.36
SHMT2-202ENST00000414700 TBPP20226 339 aa12.82□□□□□ -0.36
SHMT2-202ENST00000414700 TMEM155Q4W5P6 130 aa12.82□□□□□ -0.36
SHMT2-202ENST00000414700 ARRDC1Q8N5I2 433 aa12.82□□□□□ -0.36
SHMT2-202ENST00000414700 OR5H2Q8NGV7 314 aa12.82□□□□□ -0.36
SHMT2-202ENST00000414700 OR8U1Q8NH10 309 aa12.82□□□□□ -0.36
SHMT2-202ENST00000414700 C19orf12Q9NSK7 152 aa12.82□□□□□ -0.36
SHMT2-202ENST00000414700 EHFQ9NZC4 300 aa12.82□□□□□ -0.36
SHMT2-202ENST00000414700 TRDCB7Z8K6 153 aa12.81□□□□□ -0.36
SHMT2-202ENST00000414700 C12orf77C9JDV5 145 aa12.81□□□□□ -0.36
SHMT2-202ENST00000414700 NDUFB3O43676 98 aa12.81□□□□□ -0.36
SHMT2-202ENST00000414700 WNT2P09544 360 aa12.81□□□□□ -0.36
SHMT2-202ENST00000414700 LRRC10Q5BKY1 277 aa12.81□□□□□ -0.36
SHMT2-202ENST00000414700 DNLZQ5SXM8 178 aa12.81□□□□□ -0.36
SHMT2-202ENST00000414700 TMEM268Q5VZI3 342 aa12.81□□□□□ -0.36
SHMT2-202ENST00000414700 RPL7L1Q6DKI1 246 aaKnown RBP12.81□□□□□ -0.36
SHMT2-202ENST00000414700 FAM53AQ6NSI3 398 aaPredicted RBP12.81□□□□□ -0.36
SHMT2-202ENST00000414700 Q6ZS49 121 aa12.81□□□□□ -0.36
SHMT2-202ENST00000414700 REC114Q7Z4M0 266 aa12.81□□□□□ -0.36
SHMT2-202ENST00000414700 H7C1Q1 480 aa12.81□□□□□ -0.36
SHMT2-202ENST00000414700 PAX1P15863 534 aa12.81□□□□□ -0.36
SHMT2-202ENST00000414700 SULT1A1P50225 295 aa12.81□□□□□ -0.36
SHMT2-202ENST00000414700 PDLIM4P50479 330 aa12.81□□□□□ -0.36
SHMT2-202ENST00000414700 TAS2R60P59551 318 aa12.81□□□□□ -0.36
SHMT2-202ENST00000414700 HLA-DRB3P79483 266 aa12.81□□□□□ -0.36
SHMT2-202ENST00000414700 KIAA0141Q14154 515 aaPredicted RBP12.81□□□□□ -0.36
SHMT2-202ENST00000414700 SRSF7Q16629 238 aaKnown RBP eCLIP12.81□□□□□ -0.36
SHMT2-202ENST00000414700 RNASE11Q8TAA1 199 aaKnown RBP12.81□□□□□ -0.36
SHMT2-202ENST00000414700 RFESDQ8TAC1 157 aa12.81□□□□□ -0.36
SHMT2-202ENST00000414700 IL1F10Q8WWZ1 152 aa12.81□□□□□ -0.36
SHMT2-202ENST00000414700 H1FXQ92522 213 aaKnown RBP12.81□□□□□ -0.36
SHMT2-202ENST00000414700 FAM168AQ92567 244 aa12.81□□□□□ -0.36
SHMT2-202ENST00000414700 IGHV4-30-2A0A087WSY4 118 aa12.8□□□□□ -0.36
SHMT2-202ENST00000414700 IFITM10A6NMD0 228 aa12.8□□□□□ -0.36
SHMT2-202ENST00000414700 PHF1O43189 567 aaPredicted RBP12.8□□□□□ -0.36
SHMT2-202ENST00000414700 YIF1AO95070 293 aa12.8□□□□□ -0.36
SHMT2-202ENST00000414700 IFNA6P05013 189 aa12.8□□□□□ -0.36
SHMT2-202ENST00000414700 OMGP23515 440 aa12.8□□□□□ -0.36
SHMT2-202ENST00000414700 TAS2R46P59540 309 aa12.8□□□□□ -0.36
SHMT2-202ENST00000414700 ERVFRD-1P60508 538 aa12.8□□□□□ -0.36
SHMT2-202ENST00000414700 OR1L1Q8NH94 360 aa12.8□□□□□ -0.36
SHMT2-202ENST00000414700 PRDM13Q9H4Q3 707 aa12.8□□□□□ -0.36
SHMT2-202ENST00000414700 GAR1Q9NY12 217 aaKnown RBP12.8□□□□□ -0.36
SHMT2-202ENST00000414700 NOTCH2Q04721 2471 aa12.8□□□□□ -0.36
SHMT2-202ENST00000414700 TSPAN15O95858 294 aa12.79□□□□□ -0.36
SHMT2-202ENST00000414700 IFNA10P01566 189 aa12.79□□□□□ -0.36
SHMT2-202ENST00000414700 HKR1P10072 659 aa12.79□□□□□ -0.36
SHMT2-202ENST00000414700 RPL31P62899 125 aaKnown RBP12.79□□□□□ -0.36
SHMT2-202ENST00000414700 TMEM128Q5BJH2 165 aa12.79□□□□□ -0.36
SHMT2-202ENST00000414700 VAX1Q5SQQ9 334 aa12.79□□□□□ -0.36
SHMT2-202ENST00000414700 MOB1BQ7L9L4 216 aa12.79□□□□□ -0.36
SHMT2-202ENST00000414700 ZNF565Q8N9K5 539 aa12.79□□□□□ -0.36
SHMT2-202ENST00000414700 MARCH1Q8TCQ1 289 aa12.79□□□□□ -0.36
SHMT2-202ENST00000414700 C10orf105Q8TEF2 133 aa12.79□□□□□ -0.36
SHMT2-202ENST00000414700 RHOVQ96L33 236 aa12.79□□□□□ -0.36
SHMT2-202ENST00000414700 PATZ1Q9HBE1 687 aaKnown RBP12.79□□□□□ -0.36
SHMT2-202ENST00000414700 FLNBO75369 2602 aaKnown RBP12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms