RNA–Protein interactions for RNA: ENST00000414057.6

SCAMP4-204, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 1 (best)

Gene SCAMP4, Length 1,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-204ENST00000414057 IGKV1D-13A0A0B4J2D9 117 aa13.73□□□□□ -0.21
SCAMP4-204ENST00000414057 TEX13DA0A0J9YY54 714 aaPredicted RBP13.73□□□□□ -0.21
SCAMP4-204ENST00000414057 YPEL1O60688 119 aa13.73□□□□□ -0.21
SCAMP4-204ENST00000414057 IGKV1-13P0DP09 117 aa13.73□□□□□ -0.21
SCAMP4-204ENST00000414057 CD34P28906 385 aa13.73□□□□□ -0.21
SCAMP4-204ENST00000414057 RELBQ01201 579 aa13.73□□□□□ -0.21
SCAMP4-204ENST00000414057 C17orf58Q2M2W7 97 aa13.73□□□□□ -0.21
SCAMP4-204ENST00000414057 TREML4Q6UXN2 200 aa13.73□□□□□ -0.21
SCAMP4-204ENST00000414057 KCTD9Q7L273 389 aa13.73□□□□□ -0.21
SCAMP4-204ENST00000414057 TCTE3Q8IZS6 198 aa13.73□□□□□ -0.21
SCAMP4-204ENST00000414057 ZBTB34Q8NCN2 500 aa13.73□□□□□ -0.21
SCAMP4-204ENST00000414057 BVESQ8NE79 360 aa13.73□□□□□ -0.21
SCAMP4-204ENST00000414057 OR2AK2Q8NG84 335 aa13.73□□□□□ -0.21
SCAMP4-204ENST00000414057 OR5R1Q8NH85 324 aa13.73□□□□□ -0.21
SCAMP4-204ENST00000414057 WFDC12Q8WWY7 111 aa13.73□□□□□ -0.21
SCAMP4-204ENST00000414057 ST6GAL2Q96JF0 529 aa13.73□□□□□ -0.21
SCAMP4-204ENST00000414057 YPEL2Q96QA6 119 aa13.73□□□□□ -0.21
SCAMP4-204ENST00000414057 NAA60Q9H7X0 242 aa13.73□□□□□ -0.21
SCAMP4-204ENST00000414057 RBM7Q9Y580 266 aaKnown RBP13.73□□□□□ -0.21
SCAMP4-204ENST00000414057 PIGBOS1A0A0B4J2F0 54 aa13.72□□□□□ -0.21
SCAMP4-204ENST00000414057 HNRNPCP07910 306 aaKnown RBP eCLIP13.72□□□□□ -0.21
SCAMP4-204ENST00000414057 SUPT4H1P63272 117 aaKnown RBP13.72□□□□□ -0.21
SCAMP4-204ENST00000414057 KIAA2026Q5HYC2 2103 aa13.72□□□□□ -0.21
SCAMP4-204ENST00000414057 ZNF818PQ6ZRF7 136 aa13.72□□□□□ -0.21
SCAMP4-204ENST00000414057 TCF23Q7RTU1 214 aa13.72□□□□□ -0.21
SCAMP4-204ENST00000414057 OR11H7Q8NGC8 314 aa13.72□□□□□ -0.21
SCAMP4-204ENST00000414057 OR52L2PQ8NGH6 319 aa13.72□□□□□ -0.21
SCAMP4-204ENST00000414057 TNFRSF14Q92956 283 aa13.72□□□□□ -0.21
SCAMP4-204ENST00000414057 ZNF714Q96N38 554 aa13.72□□□□□ -0.21
SCAMP4-204ENST00000414057 GNG12Q9UBI6 72 aa13.72□□□□□ -0.21
SCAMP4-204ENST00000414057 VPREB3Q9UKI3 123 aa13.72□□□□□ -0.21
SCAMP4-204ENST00000414057 RNF114Q9Y508 228 aa13.72□□□□□ -0.21
SCAMP4-204ENST00000414057 TIMM23O14925 209 aa13.71□□□□□ -0.21
SCAMP4-204ENST00000414057 HLA-GP17693 338 aa13.71□□□□□ -0.21
SCAMP4-204ENST00000414057 SAA4P35542 130 aa13.71□□□□□ -0.21
SCAMP4-204ENST00000414057 SRPXP78539 464 aa13.71□□□□□ -0.21
SCAMP4-204ENST00000414057 Q3ZCU0 254 aa13.71□□□□□ -0.21
SCAMP4-204ENST00000414057 MIDNQ504T8 468 aa13.71□□□□□ -0.21
SCAMP4-204ENST00000414057 DHRS7BQ6IAN0 325 aaPredicted RBP13.71□□□□□ -0.21
SCAMP4-204ENST00000414057 RFESDQ8TAC1 157 aa13.71□□□□□ -0.21
SCAMP4-204ENST00000414057 UBALD1Q8TB05 177 aa13.71□□□□□ -0.21
SCAMP4-204ENST00000414057 C19orf12Q9NSK7 152 aa13.71□□□□□ -0.21
SCAMP4-204ENST00000414057 IDI2-AS1Q9NZ38 188 aa13.71□□□□□ -0.21
SCAMP4-204ENST00000414057 MGAT4CQ9UBM8 478 aa13.71□□□□□ -0.21
SCAMP4-204ENST00000414057 A0A1W2PRD5 423 aa13.7□□□□□ -0.22
SCAMP4-204ENST00000414057 A0A1W2PRF3 423 aa13.7□□□□□ -0.22
SCAMP4-204ENST00000414057 A0A1W2PRM7 423 aa13.7□□□□□ -0.22
SCAMP4-204ENST00000414057 M0QZ24 198 aa13.7□□□□□ -0.22
SCAMP4-204ENST00000414057 MPPED1O15442 326 aa13.7□□□□□ -0.22
SCAMP4-204ENST00000414057 RAB7AP51149 207 aa13.7□□□□□ -0.22
SCAMP4-204ENST00000414057 LOXL3P58215 753 aa13.7□□□□□ -0.22
SCAMP4-204ENST00000414057 CD83Q01151 205 aa13.7□□□□□ -0.22
SCAMP4-204ENST00000414057 KLRD1Q13241 179 aa13.7□□□□□ -0.22
SCAMP4-204ENST00000414057 MORN2Q502X0 79 aa13.7□□□□□ -0.22
SCAMP4-204ENST00000414057 PHLDA2Q53GA4 152 aa13.7□□□□□ -0.22
SCAMP4-204ENST00000414057 LIN54Q6MZP7 749 aa13.7□□□□□ -0.22
SCAMP4-204ENST00000414057 ZNF645Q8N7E2 425 aa13.7□□□□□ -0.22
SCAMP4-204ENST00000414057 BEND2Q8NDZ0 799 aa13.7□□□□□ -0.22
SCAMP4-204ENST00000414057 CASTOR1Q8WTX7 329 aa13.7□□□□□ -0.22
SCAMP4-204ENST00000414057 ZNF436Q9C0F3 470 aaPredicted RBP13.7□□□□□ -0.22
SCAMP4-204ENST00000414057 HEXA-AS1Q9H8Q6 139 aa13.7□□□□□ -0.22
SCAMP4-204ENST00000414057 CCL28Q9NRJ3 127 aa13.7□□□□□ -0.22
SCAMP4-204ENST00000414057 GFOD1Q9NXC2 390 aa13.7□□□□□ -0.22
SCAMP4-204ENST00000414057 DBX1A6NMT0 343 aa13.69□□□□□ -0.22
SCAMP4-204ENST00000414057 GIPP09681 153 aaPredicted RBP13.69□□□□□ -0.22
SCAMP4-204ENST00000414057 OR8U9P0C7N5 309 aa13.69□□□□□ -0.22
SCAMP4-204ENST00000414057 CXCL3P19876 107 aa13.69□□□□□ -0.22
SCAMP4-204ENST00000414057 PPP1CCP36873 323 aaKnown RBP13.69□□□□□ -0.22
SCAMP4-204ENST00000414057 TMEM200BQ69YZ2 307 aa13.69□□□□□ -0.22
SCAMP4-204ENST00000414057 HEPN1Q6WQI6 88 aa13.69□□□□□ -0.22
SCAMP4-204ENST00000414057 UXS1Q8NBZ7 420 aa13.69□□□□□ -0.22
SCAMP4-204ENST00000414057 OR8U1Q8NH10 309 aa13.69□□□□□ -0.22
SCAMP4-204ENST00000414057 LINC01006Q8NI28 216 aa13.69□□□□□ -0.22
SCAMP4-204ENST00000414057 CITED1Q99966 193 aa13.69□□□□□ -0.22
SCAMP4-204ENST00000414057 RANGRFQ9HD47 186 aaPredicted RBP13.69□□□□□ -0.22
SCAMP4-204ENST00000414057 HSD17B6O14756 317 aa13.68□□□□□ -0.22
SCAMP4-204ENST00000414057 OR2A4O95047 310 aa13.68□□□□□ -0.22
SCAMP4-204ENST00000414057 RBP4P02753 201 aa13.68□□□□□ -0.22
SCAMP4-204ENST00000414057 PRB3Q04118 309 aaPredicted RBP13.68□□□□□ -0.22
SCAMP4-204ENST00000414057 ZNF273Q14593 569 aa13.68□□□□□ -0.22
SCAMP4-204ENST00000414057 GNMTQ14749 295 aa13.68□□□□□ -0.22
SCAMP4-204ENST00000414057 LRTM2Q8N967 370 aa13.68□□□□□ -0.22
SCAMP4-204ENST00000414057 OR5M8Q8NGP6 311 aa13.68□□□□□ -0.22
SCAMP4-204ENST00000414057 OR2A7Q96R45 310 aa13.68□□□□□ -0.22
SCAMP4-204ENST00000414057 C16orf95Q9H693 158 aa13.68□□□□□ -0.22
SCAMP4-204ENST00000414057 RAB18Q9NP72 206 aa13.68□□□□□ -0.22
SCAMP4-204ENST00000414057 IGHV3-43A0A0B4J1X8 118 aa13.67□□□□□ -0.22
SCAMP4-204ENST00000414057 C3orf85A0A1B0GTC6 90 aa13.67□□□□□ -0.22
SCAMP4-204ENST00000414057 GOSR2O14653 212 aa13.67□□□□□ -0.22
SCAMP4-204ENST00000414057 IGHV3-43DP0DP04 118 aa13.67□□□□□ -0.22
SCAMP4-204ENST00000414057 DLX1P56177 255 aa13.67□□□□□ -0.22
SCAMP4-204ENST00000414057 ERVFRD-1P60508 538 aa13.67□□□□□ -0.22
SCAMP4-204ENST00000414057 RAP2BP61225 183 aa13.67□□□□□ -0.22
SCAMP4-204ENST00000414057 TBC1D26Q86UD7 250 aa13.67□□□□□ -0.22
SCAMP4-204ENST00000414057 OR2D2Q9H210 308 aa13.67□□□□□ -0.22
SCAMP4-204ENST00000414057 GAB2Q9UQC2 676 aa13.67□□□□□ -0.22
SCAMP4-204ENST00000414057 H0Y980 276 aa13.67□□□□□ -0.22
SCAMP4-204ENST00000414057 PGLYRP1O75594 196 aaPredicted RBP13.67□□□□□ -0.22
SCAMP4-204ENST00000414057 TSPAN9O75954 239 aa13.67□□□□□ -0.22
SCAMP4-204ENST00000414057 IGLV2-14P01704 120 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 321.7 ms