RNA–Protein interactions for RNA: ENST00000412615.6

TRAFD1-202, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRAFD1, Length 2,697 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-202ENST00000412615 A0A1W2PR64 198 aa9.56□□□□□ -0.88
TRAFD1-202ENST00000412615 A0A1W2PRV1 198 aa9.56□□□□□ -0.88
TRAFD1-202ENST00000412615 ZNF98A6NK75 572 aa9.56□□□□□ -0.88
TRAFD1-202ENST00000412615 ZG16O60844 167 aa9.56□□□□□ -0.88
TRAFD1-202ENST00000412615 IFNA1P01562 189 aa9.56□□□□□ -0.88
TRAFD1-202ENST00000412615 CRYABP02511 175 aaKnown RBP9.56□□□□□ -0.88
TRAFD1-202ENST00000412615 TIMP3P35625 211 aa9.56□□□□□ -0.88
TRAFD1-202ENST00000412615 ELLP55199 621 aaPredicted RBP9.56□□□□□ -0.88
TRAFD1-202ENST00000412615 SNRPEP62304 92 aaKnown RBP9.56□□□□□ -0.88
TRAFD1-202ENST00000412615 RTP5Q14D33 572 aa9.56□□□□□ -0.88
TRAFD1-202ENST00000412615 LTC4SQ16873 150 aa9.56□□□□□ -0.88
TRAFD1-202ENST00000412615 C1orf185Q5T7R7 199 aa9.56□□□□□ -0.88
TRAFD1-202ENST00000412615 MRGPRGQ86SM5 289 aa9.56□□□□□ -0.88
TRAFD1-202ENST00000412615 MEGF10Q96KG7 1140 aa9.56□□□□□ -0.88
TRAFD1-202ENST00000412615 SLC39A9Q9NUM3 307 aa9.56□□□□□ -0.88
TRAFD1-202ENST00000412615 MAP1LC3B2A6NCE7 125 aa9.56□□□□□ -0.88
TRAFD1-202ENST00000412615 MARCH11A6NNE9 402 aa9.56□□□□□ -0.88
TRAFD1-202ENST00000412615 CEBPZOSA8MTT3 80 aa9.56□□□□□ -0.88
TRAFD1-202ENST00000412615 YPEL1O60688 119 aa9.56□□□□□ -0.88
TRAFD1-202ENST00000412615 DUTP33316 252 aaKnown RBP9.56□□□□□ -0.88
TRAFD1-202ENST00000412615 FGF8P55075 233 aaPredicted RBP9.56□□□□□ -0.88
TRAFD1-202ENST00000412615 RAB11AP62491 216 aa9.56□□□□□ -0.88
TRAFD1-202ENST00000412615 MORN2Q502X0 79 aa9.56□□□□□ -0.88
TRAFD1-202ENST00000412615 YPEL2Q96QA6 119 aa9.56□□□□□ -0.88
TRAFD1-202ENST00000412615 MAP1LC3BQ9GZQ8 125 aa9.56□□□□□ -0.88
TRAFD1-202ENST00000412615 VAX2Q9UIW0 290 aa9.56□□□□□ -0.88
TRAFD1-202ENST00000412615 CXorf65A6NEN9 183 aa9.55□□□□□ -0.88
TRAFD1-202ENST00000412615 C5orf52A6NGY3 159 aa9.55□□□□□ -0.88
TRAFD1-202ENST00000412615 PMS2P5A8MQ11 134 aa9.55□□□□□ -0.88
TRAFD1-202ENST00000412615 B4DEV8 164 aa9.55□□□□□ -0.88
TRAFD1-202ENST00000412615 LY86O95711 162 aa9.55□□□□□ -0.88
TRAFD1-202ENST00000412615 MBP02144 154 aa9.55□□□□□ -0.88
TRAFD1-202ENST00000412615 CD55P08174 381 aa9.55□□□□□ -0.88
TRAFD1-202ENST00000412615 NKX6-1P78426 367 aaPredicted RBP9.55□□□□□ -0.88
TRAFD1-202ENST00000412615 PMS2P11Q13670 270 aa9.55□□□□□ -0.88
TRAFD1-202ENST00000412615 NCR3LG1Q68D85 454 aa9.55□□□□□ -0.88
TRAFD1-202ENST00000412615 RBMS3Q6XE24 437 aaKnown RBP9.55□□□□□ -0.88
TRAFD1-202ENST00000412615 MOGAT3Q86VF5 341 aa9.55□□□□□ -0.88
TRAFD1-202ENST00000412615 R3HDM4Q96D70 268 aa9.55□□□□□ -0.88
TRAFD1-202ENST00000412615 YPEL4Q96NS1 127 aa9.55□□□□□ -0.88
TRAFD1-202ENST00000412615 SIRT7Q9NRC8 400 aa9.55□□□□□ -0.88
TRAFD1-202ENST00000412615 HPRT1P00492 218 aa9.55□□□□□ -0.88
TRAFD1-202ENST00000412615 LHBP01229 141 aa9.55□□□□□ -0.88
TRAFD1-202ENST00000412615 IFNA17P01571 189 aa9.55□□□□□ -0.88
TRAFD1-202ENST00000412615 LINC00205P59089 165 aa9.55□□□□□ -0.88
TRAFD1-202ENST00000412615 VHLLQ6RSH7 139 aa9.55□□□□□ -0.88
TRAFD1-202ENST00000412615 FAM180AQ6UWF9 173 aa9.55□□□□□ -0.88
TRAFD1-202ENST00000412615 HEPN1Q6WQI6 88 aa9.55□□□□□ -0.88
TRAFD1-202ENST00000412615 SSX7Q7RTT5 188 aa9.55□□□□□ -0.88
TRAFD1-202ENST00000412615 LHX4Q969G2 390 aa9.55□□□□□ -0.88
TRAFD1-202ENST00000412615 ZDHHC16Q969W1 377 aa9.55□□□□□ -0.88
TRAFD1-202ENST00000412615 OR6C3Q9NZP0 311 aa9.55□□□□□ -0.88
TRAFD1-202ENST00000412615 INTS1Q8N201 2190 aaKnown RBP9.54□□□□□ -0.88
TRAFD1-202ENST00000412615 IGLV3-9A0A075B6K5 115 aa9.54□□□□□ -0.88
TRAFD1-202ENST00000412615 IGHV3OR15-7A0A075B7D8 119 aa9.54□□□□□ -0.88
TRAFD1-202ENST00000412615 ZNF727A8MUV8 499 aa9.54□□□□□ -0.88
TRAFD1-202ENST00000412615 SPRY3O43610 288 aa9.54□□□□□ -0.88
TRAFD1-202ENST00000412615 SELENOVP59797 346 aa9.54□□□□□ -0.88
TRAFD1-202ENST00000412615 GNB2P62879 340 aa9.54□□□□□ -0.88
TRAFD1-202ENST00000412615 PNRC1Q12796 327 aaPredicted RBP9.54□□□□□ -0.88
TRAFD1-202ENST00000412615 FAM90A2PQ658T7 463 aa9.54□□□□□ -0.88
TRAFD1-202ENST00000412615 C1QL4Q86Z23 238 aa9.54□□□□□ -0.88
TRAFD1-202ENST00000412615 RPRMLQ8N4K4 120 aa9.54□□□□□ -0.88
TRAFD1-202ENST00000412615 RPP25LQ8N5L8 163 aaKnown RBP9.54□□□□□ -0.88
TRAFD1-202ENST00000412615 ZNRF1Q8ND25 227 aa9.54□□□□□ -0.88
TRAFD1-202ENST00000412615 SFXN3Q9BWM7 321 aa9.54□□□□□ -0.88
TRAFD1-202ENST00000412615 RAB9BQ9NP90 201 aa9.54□□□□□ -0.88
TRAFD1-202ENST00000412615 PTPRBP23467 1997 aa9.54□□□□□ -0.88
TRAFD1-202ENST00000412615 EP300Q09472 2414 aaPredicted RBP9.54□□□□□ -0.88
TRAFD1-202ENST00000412615 FAM90A9PA6NNJ1 464 aa9.54□□□□□ -0.88
TRAFD1-202ENST00000412615 F2RL2O00254 374 aa9.54□□□□□ -0.88
TRAFD1-202ENST00000412615 FCGR3BO75015 233 aa9.54□□□□□ -0.88
TRAFD1-202ENST00000412615 PROP1O75360 226 aa9.54□□□□□ -0.88
TRAFD1-202ENST00000412615 FGF7P21781 194 aa9.54□□□□□ -0.88
TRAFD1-202ENST00000412615 EDDM3BP56851 147 aa9.54□□□□□ -0.88
TRAFD1-202ENST00000412615 ZNF709Q8N972 641 aa9.54□□□□□ -0.88
TRAFD1-202ENST00000412615 CA5BP1Q8WTZ4 195 aa9.54□□□□□ -0.88
TRAFD1-202ENST00000412615 C12orf57Q99622 126 aa9.54□□□□□ -0.88
TRAFD1-202ENST00000412615 NCOR1P1Q9H4R4 102 aa9.54□□□□□ -0.88
TRAFD1-202ENST00000412615 CACNA1DQ01668 2161 aa9.54□□□□□ -0.88
TRAFD1-202ENST00000412615 PRR14LQ5THK1 2151 aa9.54□□□□□ -0.88
TRAFD1-202ENST00000412615 M0R1X1 148 aa9.53□□□□□ -0.88
TRAFD1-202ENST00000412615 UBE2CO00762 179 aa9.53□□□□□ -0.88
TRAFD1-202ENST00000412615 RBFOX2O43251 390 aaKnown RBP eCLIP9.53□□□□□ -0.881e-5■■■■□ 20.3
TRAFD1-202ENST00000412615 IGKV1D-33P01593 117 aa9.53□□□□□ -0.88
TRAFD1-202ENST00000412615 IGKV1-33P01594 117 aa9.53□□□□□ -0.88
TRAFD1-202ENST00000412615 LOXL3P58215 753 aa9.53□□□□□ -0.88
TRAFD1-202ENST00000412615 OR2B8PP59922 312 aa9.53□□□□□ -0.88
TRAFD1-202ENST00000412615 VWC2Q2TAL6 325 aa9.53□□□□□ -0.88
TRAFD1-202ENST00000412615 KRTCAP3Q53RY4 240 aa9.53□□□□□ -0.88
TRAFD1-202ENST00000412615 ACSM6Q6P461 480 aa9.53□□□□□ -0.88
TRAFD1-202ENST00000412615 RBMXL3Q8N7X1 1067 aaKnown RBP9.53□□□□□ -0.88
TRAFD1-202ENST00000412615 ITLN1Q8WWA0 313 aa9.53□□□□□ -0.88
TRAFD1-202ENST00000412615 PLPPR2Q96GM1 343 aa9.53□□□□□ -0.88
TRAFD1-202ENST00000412615 CTXND1A0A1B0GTU2 59 aa9.53□□□□□ -0.88
TRAFD1-202ENST00000412615 GATA4P43694 442 aa9.53□□□□□ -0.88
TRAFD1-202ENST00000412615 AARDQ4LEZ3 155 aa9.53□□□□□ -0.88
TRAFD1-202ENST00000412615 SPRNQ5BIV9 151 aa9.53□□□□□ -0.88
TRAFD1-202ENST00000412615 QTRT1Q9BXR0 403 aaKnown RBP9.53□□□□□ -0.88
TRAFD1-202ENST00000412615 HEATR1Q9H583 2144 aaKnown RBP9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms