RNA–Protein interactions for RNA: ENST00000409937.1

CNGA3-204, Transcript of cyclic nucleotide gated channel alpha 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CNGA3, Length 2,615 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA3-204ENST00000409937 MSL2Q9HCI7 577 aa11.8□□□□□ -0.52
CNGA3-204ENST00000409937 MBNL3Q9NUK0 354 aaKnown RBP11.8□□□□□ -0.52
CNGA3-204ENST00000409937 TREM2Q9NZC2 230 aa11.8□□□□□ -0.52
CNGA3-204ENST00000409937 B4DEV8 164 aa11.79□□□□□ -0.52
CNGA3-204ENST00000409937 SERF2P84101 59 aa11.79□□□□□ -0.52
CNGA3-204ENST00000409937 PNRC1Q12796 327 aaPredicted RBP11.79□□□□□ -0.52
CNGA3-204ENST00000409937 Q3ZCU0 254 aa11.79□□□□□ -0.52
CNGA3-204ENST00000409937 DHRS13Q6UX07 377 aa11.79□□□□□ -0.52
CNGA3-204ENST00000409937 HEATR1Q9H583 2144 aaKnown RBP11.79□□□□□ -0.52
CNGA3-204ENST00000409937 HCFC1P51610 2035 aa11.79□□□□□ -0.52
CNGA3-204ENST00000409937 PGPEP1LA6NFU8 196 aa11.79□□□□□ -0.52
CNGA3-204ENST00000409937 PTBP3O95758 552 aaKnown RBP11.79□□□□□ -0.52
CNGA3-204ENST00000409937 MPLP40238 635 aa11.79□□□□□ -0.52
CNGA3-204ENST00000409937 EDDM3AQ14507 147 aa11.79□□□□□ -0.52
CNGA3-204ENST00000409937 MOB1BQ7L9L4 216 aa11.79□□□□□ -0.52
CNGA3-204ENST00000409937 ZNF645Q8N7E2 425 aa11.79□□□□□ -0.52
CNGA3-204ENST00000409937 DTD1Q8TEA8 209 aa11.79□□□□□ -0.52
CNGA3-204ENST00000409937 HIPK2Q9H2X6 1198 aa11.79□□□□□ -0.52
CNGA3-204ENST00000409937 LRRC30A6NM36 301 aa11.78□□□□□ -0.52
CNGA3-204ENST00000409937 RAC2P15153 192 aa11.78□□□□□ -0.52
CNGA3-204ENST00000409937 DEFA6Q01524 100 aa11.78□□□□□ -0.52
CNGA3-204ENST00000409937 TMEM241Q24JQ0 296 aa11.78□□□□□ -0.52
CNGA3-204ENST00000409937 BSXQ3C1V8 233 aa11.78□□□□□ -0.52
CNGA3-204ENST00000409937 VKORC1L1Q8N0U8 176 aa11.78□□□□□ -0.52
CNGA3-204ENST00000409937 OR13A1Q8NGR1 328 aa11.78□□□□□ -0.52
CNGA3-204ENST00000409937 GALMQ96C23 342 aa11.78□□□□□ -0.52
CNGA3-204ENST00000409937 HSPB7Q9UBY9 170 aa11.78□□□□□ -0.52
CNGA3-204ENST00000409937 NAT8Q9UHE5 227 aa11.78□□□□□ -0.52
CNGA3-204ENST00000409937 PSG11Q9UQ72 335 aa11.78□□□□□ -0.52
CNGA3-204ENST00000409937 POLDIP2Q9Y2S7 368 aa11.78□□□□□ -0.52
CNGA3-204ENST00000409937 WIPI2Q9Y4P8 454 aa11.78□□□□□ -0.52
CNGA3-204ENST00000409937 TRAV38-1A0A0B4J264 116 aa11.78□□□□□ -0.52
CNGA3-204ENST00000409937 IFNA1P01562 189 aa11.78□□□□□ -0.52
CNGA3-204ENST00000409937 CHRNA7P36544 502 aa11.78□□□□□ -0.52
CNGA3-204ENST00000409937 GALR1P47211 349 aa11.78□□□□□ -0.52
CNGA3-204ENST00000409937 UBE2NP61088 152 aaKnown RBP11.78□□□□□ -0.52
CNGA3-204ENST00000409937 ZNF146Q15072 292 aa11.78□□□□□ -0.52
CNGA3-204ENST00000409937 CNEP1R1Q8N9A8 125 aa11.78□□□□□ -0.52
CNGA3-204ENST00000409937 OR10A7Q8NGE5 316 aa11.78□□□□□ -0.52
CNGA3-204ENST00000409937 NANOS1Q8WY41 292 aaKnown RBP11.78□□□□□ -0.52
CNGA3-204ENST00000409937 RAB24Q969Q5 203 aa11.78□□□□□ -0.52
CNGA3-204ENST00000409937 MEGF10Q96KG7 1140 aa11.78□□□□□ -0.52
CNGA3-204ENST00000409937 DERL1Q9BUN8 251 aa11.78□□□□□ -0.52
CNGA3-204ENST00000409937 GFOD1Q9NXC2 390 aa11.78□□□□□ -0.52
CNGA3-204ENST00000409937 KCNIP1Q9NZI2 227 aa11.78□□□□□ -0.52
CNGA3-204ENST00000409937 TRGV5A0A0B4J1U4 118 aa11.77□□□□□ -0.52
CNGA3-204ENST00000409937 PMS2P5A8MQ11 134 aa11.77□□□□□ -0.52
CNGA3-204ENST00000409937 GATCO43716 136 aaKnown RBP11.77□□□□□ -0.52
CNGA3-204ENST00000409937 KBTBD11O94819 623 aa11.77□□□□□ -0.52
CNGA3-204ENST00000409937 HIST1H1BP16401 226 aaKnown RBP11.77□□□□□ -0.52
CNGA3-204ENST00000409937 NPPCP23582 126 aa11.77□□□□□ -0.52
CNGA3-204ENST00000409937 SRSF6Q13247 344 aaKnown RBP11.77□□□□□ -0.52
CNGA3-204ENST00000409937 MDS2Q8NDY4 140 aa11.77□□□□□ -0.52
CNGA3-204ENST00000409937 OR13D1Q8NGV5 346 aa11.77□□□□□ -0.52
CNGA3-204ENST00000409937 KLF14Q8TD94 323 aaPredicted RBP11.77□□□□□ -0.52
CNGA3-204ENST00000409937 DMXL1Q9Y485 3027 aa11.77□□□□□ -0.52
CNGA3-204ENST00000409937 RP1L1Q8IWN7 2480 aaPredicted RBP11.77□□□□□ -0.53
CNGA3-204ENST00000409937 A0A1B0GUS0 222 aa11.77□□□□□ -0.53
CNGA3-204ENST00000409937 TMEM30CPA0ZSE6 113 aa11.77□□□□□ -0.53
CNGA3-204ENST00000409937 OPN1MWP04001 364 aa11.77□□□□□ -0.53
CNGA3-204ENST00000409937 PFN1P07737 140 aaKnown RBP11.77□□□□□ -0.53
CNGA3-204ENST00000409937 OPN1MW2P0DN77 364 aa11.77□□□□□ -0.53
CNGA3-204ENST00000409937 OPN1MW3P0DN78 364 aa11.77□□□□□ -0.53
CNGA3-204ENST00000409937 HNF1AP20823 631 aa11.77□□□□□ -0.53
CNGA3-204ENST00000409937 FABP6P51161 128 aa11.77□□□□□ -0.53
CNGA3-204ENST00000409937 CYP2G1PQ6ZSU1 146 aa11.77□□□□□ -0.53
CNGA3-204ENST00000409937 TMEM37Q8WXS4 190 aa11.77□□□□□ -0.53
CNGA3-204ENST00000409937 PINX1Q96BK5 328 aaKnown RBP11.77□□□□□ -0.53
CNGA3-204ENST00000409937 SDSLQ96GA7 329 aa11.77□□□□□ -0.53
CNGA3-204ENST00000409937 C14orf144Q96I85 54 aa11.77□□□□□ -0.53
CNGA3-204ENST00000409937 P2RX4Q99571 388 aa11.77□□□□□ -0.53
CNGA3-204ENST00000409937 QTRT1Q9BXR0 403 aaKnown RBP11.77□□□□□ -0.53
CNGA3-204ENST00000409937 NPCDR1Q9BY65 106 aa11.77□□□□□ -0.53
CNGA3-204ENST00000409937 TRBV24-1A0A075B6N3 115 aa11.76□□□□□ -0.53
CNGA3-204ENST00000409937 SMCO3A2RU48 225 aa11.76□□□□□ -0.53
CNGA3-204ENST00000409937 H7BYZ3 331 aa11.76□□□□□ -0.53
CNGA3-204ENST00000409937 PSMB3P49720 205 aa11.76□□□□□ -0.53
CNGA3-204ENST00000409937 FAM3BP58499 235 aaPredicted RBP11.76□□□□□ -0.53
CNGA3-204ENST00000409937 ZNF766Q5HY98 468 aa11.76□□□□□ -0.53
CNGA3-204ENST00000409937 UTF1Q5T230 341 aa11.76□□□□□ -0.53
CNGA3-204ENST00000409937 C11orf53Q8IXP5 236 aa11.76□□□□□ -0.53
CNGA3-204ENST00000409937 TMEM147Q9BVK8 224 aa11.76□□□□□ -0.53
CNGA3-204ENST00000409937 DDA1Q9BW61 102 aa11.76□□□□□ -0.53
CNGA3-204ENST00000409937 ELOA3CA0A087WX78 387 aaPredicted RBP11.76□□□□□ -0.53
CNGA3-204ENST00000409937 TNFSF15O95150 251 aa11.76□□□□□ -0.53
CNGA3-204ENST00000409937 GYPAP02724 150 aa11.76□□□□□ -0.53
CNGA3-204ENST00000409937 P0C879 139 aa11.76□□□□□ -0.53
CNGA3-204ENST00000409937 ATP5G3P48201 142 aa11.76□□□□□ -0.53
CNGA3-204ENST00000409937 EDDM3BP56851 147 aa11.76□□□□□ -0.53
CNGA3-204ENST00000409937 OR10P1Q8NGE3 313 aa11.76□□□□□ -0.53
CNGA3-204ENST00000409937 GPR87Q9BY21 358 aa11.76□□□□□ -0.53
CNGA3-204ENST00000409937 PATZ1Q9HBE1 687 aaKnown RBP11.76□□□□□ -0.53
CNGA3-204ENST00000409937 FUT9Q9Y231 359 aa11.76□□□□□ -0.53
CNGA3-204ENST00000409937 KLF13Q9Y2Y9 288 aaPredicted RBP11.76□□□□□ -0.53
CNGA3-204ENST00000409937 TET2Q6N021 2002 aaPredicted RBP11.76□□□□□ -0.53
CNGA3-204ENST00000409937 CTXND1A0A1B0GTU2 59 aa11.75□□□□□ -0.53
CNGA3-204ENST00000409937 XKRY2A2RUG3 117 aa11.75□□□□□ -0.53
CNGA3-204ENST00000409937 KLRC4-KLRK1H3BQV0 150 aa11.75□□□□□ -0.53
CNGA3-204ENST00000409937 AMBPP02760 352 aa11.75□□□□□ -0.53
CNGA3-204ENST00000409937 OR9G9P0C7N8 305 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms