RNA–Protein interactions for RNA: ENST00000409285.6

VSX1-203, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best)

Gene VSX1, Length 1,486 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-203ENST00000409285 OR5AN1Q8NGI8 311 aa16.5■□□□□ 0.23
VSX1-203ENST00000409285 BEX2Q9BXY8 128 aa16.5■□□□□ 0.23
VSX1-203ENST00000409285 NUBP2Q9Y5Y2 271 aa16.5■□□□□ 0.23
VSX1-203ENST00000409285 LINC00473A8K010 186 aa16.49■□□□□ 0.23
VSX1-203ENST00000409285 PGLYRP1O75594 196 aaPredicted RBP16.49■□□□□ 0.23
VSX1-203ENST00000409285 PI3P19957 117 aa16.49■□□□□ 0.23
VSX1-203ENST00000409285 MECP2P51608 486 aaKnown RBP16.49■□□□□ 0.23
VSX1-203ENST00000409285 UBE2MP61081 183 aaKnown RBP16.49■□□□□ 0.23
VSX1-203ENST00000409285 CATR1Q13166 79 aa16.49■□□□□ 0.23
VSX1-203ENST00000409285 PHLDA2Q53GA4 152 aa16.49■□□□□ 0.23
VSX1-203ENST00000409285 KCTD9Q7L273 389 aa16.49■□□□□ 0.23
VSX1-203ENST00000409285 BCL6BQ8N143 479 aaPredicted RBP16.49■□□□□ 0.23
VSX1-203ENST00000409285 TCTEX1D1Q8N7M0 179 aa16.49■□□□□ 0.23
VSX1-203ENST00000409285 ZNF383Q8NA42 475 aa16.49■□□□□ 0.23
VSX1-203ENST00000409285 CHPT1Q8WUD6 406 aa16.49■□□□□ 0.23
VSX1-203ENST00000409285 FAM212BQ9NTI7 297 aaPredicted RBP16.49■□□□□ 0.23
VSX1-203ENST00000409285 NUDT15Q9NV35 164 aa16.49■□□□□ 0.23
VSX1-203ENST00000409285 TIMM23O14925 209 aa16.48■□□□□ 0.23
VSX1-203ENST00000409285 RLN1P04808 185 aa16.48■□□□□ 0.23
VSX1-203ENST00000409285 TAS2R31P59538 309 aa16.48■□□□□ 0.23
VSX1-203ENST00000409285 CENPSQ8N2Z9 138 aa16.48■□□□□ 0.23
VSX1-203ENST00000409285 LIN7CQ9NUP9 197 aaKnown RBP16.48■□□□□ 0.23
VSX1-203ENST00000409285 CRYM-AS1A6NIL9 109 aa16.48■□□□□ 0.23
VSX1-203ENST00000409285 FAM90A9PA6NNJ1 464 aa16.48■□□□□ 0.23
VSX1-203ENST00000409285 INAFM1C9JVW0 142 aa16.48■□□□□ 0.23
VSX1-203ENST00000409285 H0YJW9 148 aa16.48■□□□□ 0.23
VSX1-203ENST00000409285 MPPED1O15442 326 aa16.48■□□□□ 0.23
VSX1-203ENST00000409285 TNFSF12O43508 249 aa16.48■□□□□ 0.23
VSX1-203ENST00000409285 B3GALNT1O75752 331 aa16.48■□□□□ 0.23
VSX1-203ENST00000409285 SRD5A1P18405 259 aa16.48■□□□□ 0.23
VSX1-203ENST00000409285 F2RP25116 425 aa16.48■□□□□ 0.23
VSX1-203ENST00000409285 CD1BP29016 333 aa16.48■□□□□ 0.23
VSX1-203ENST00000409285 BRS3P32247 399 aa16.48■□□□□ 0.23
VSX1-203ENST00000409285 MC5RP33032 325 aa16.48■□□□□ 0.23
VSX1-203ENST00000409285 RAB13P51153 203 aa16.48■□□□□ 0.23
VSX1-203ENST00000409285 RAG2P55895 527 aa16.48■□□□□ 0.23
VSX1-203ENST00000409285 OXA1LQ15070 435 aa16.48■□□□□ 0.23
VSX1-203ENST00000409285 DEFB112Q30KQ8 113 aa16.48■□□□□ 0.23
VSX1-203ENST00000409285 TMEM128Q5BJH2 165 aa16.48■□□□□ 0.23
VSX1-203ENST00000409285 TBC1D26Q86UD7 250 aa16.48■□□□□ 0.23
VSX1-203ENST00000409285 DRAXINQ8NBI3 349 aaPredicted RBP16.48■□□□□ 0.23
VSX1-203ENST00000409285 TMEM230Q96A57 120 aa16.48■□□□□ 0.23
VSX1-203ENST00000409285 SOX21Q9Y651 276 aaPredicted RBP16.48■□□□□ 0.23
VSX1-203ENST00000409285 C2CD3Q4AC94 2353 aa16.47■□□□□ 0.23
VSX1-203ENST00000409285 RBFOX2O43251 390 aaKnown RBP eCLIP16.47■□□□□ 0.23
VSX1-203ENST00000409285 SPNP16150 400 aa16.47■□□□□ 0.23
VSX1-203ENST00000409285 RPL30P62888 115 aaKnown RBP16.47■□□□□ 0.23
VSX1-203ENST00000409285 DHODHQ02127 395 aa16.47■□□□□ 0.23
VSX1-203ENST00000409285 LRRC75BQ2VPJ9 315 aa16.47■□□□□ 0.23
VSX1-203ENST00000409285 PLET1Q6UQ28 207 aa16.47■□□□□ 0.23
VSX1-203ENST00000409285 SLC25A42Q86VD7 318 aa16.47■□□□□ 0.23
VSX1-203ENST00000409285 MINDY2Q8NBR6 621 aa16.47■□□□□ 0.23
VSX1-203ENST00000409285 ADAD2Q8NCV1 583 aaKnown RBP16.47■□□□□ 0.23
VSX1-203ENST00000409285 C22orf15Q8WYQ4 148 aa16.47■□□□□ 0.23
VSX1-203ENST00000409285 MARVELD1Q9BSK0 173 aa16.47■□□□□ 0.23
VSX1-203ENST00000409285 ALX4Q9H161 411 aaPredicted RBP16.47■□□□□ 0.23
VSX1-203ENST00000409285 PRELID3BQ9Y3B1 194 aa16.47■□□□□ 0.23
VSX1-203ENST00000409285 ARPC1BO15143 372 aaKnown RBP16.46■□□□□ 0.23
VSX1-203ENST00000409285 APOA2P02652 100 aa16.46■□□□□ 0.23
VSX1-203ENST00000409285 RRASP10301 218 aa16.46■□□□□ 0.23
VSX1-203ENST00000409285 KIR2DS2P43631 304 aa16.46■□□□□ 0.23
VSX1-203ENST00000409285 DHRS7BQ6IAN0 325 aaPredicted RBP16.46■□□□□ 0.23
VSX1-203ENST00000409285 TMED4Q7Z7H5 227 aa16.46■□□□□ 0.23
VSX1-203ENST00000409285 MOB3BQ86TA1 216 aa16.46■□□□□ 0.23
VSX1-203ENST00000409285 THNSL2Q86YJ6 484 aa16.46■□□□□ 0.23
VSX1-203ENST00000409285 PDPNQ86YL7 162 aa16.46■□□□□ 0.23
VSX1-203ENST00000409285 CD300LFQ8TDQ1 290 aa16.46■□□□□ 0.23
VSX1-203ENST00000409285 TCTEX1D2Q8WW35 142 aa16.46■□□□□ 0.23
VSX1-203ENST00000409285 GALNT14Q96FL9 552 aa16.46■□□□□ 0.23
VSX1-203ENST00000409285 ZNF48Q96MX3 618 aaPredicted RBP16.46■□□□□ 0.23
VSX1-203ENST00000409285 GPHA2Q96T91 129 aa16.46■□□□□ 0.23
VSX1-203ENST00000409285 NAA60Q9H7X0 242 aa16.46■□□□□ 0.23
VSX1-203ENST00000409285 FLVCR2Q9UPI3 526 aa16.46■□□□□ 0.23
VSX1-203ENST00000409285 WASHC3Q9Y3C0 194 aa16.46■□□□□ 0.23
VSX1-203ENST00000409285 NF1P21359 2839 aa16.45■□□□□ 0.22
VSX1-203ENST00000409285 H0Y980 276 aa16.45■□□□□ 0.22
VSX1-203ENST00000409285 PEX14O75381 377 aa16.45■□□□□ 0.22
VSX1-203ENST00000409285 CRLF1O75462 422 aa16.45■□□□□ 0.22
VSX1-203ENST00000409285 PAX6P26367 422 aa16.45■□□□□ 0.22
VSX1-203ENST00000409285 LINC00205P59089 165 aa16.45■□□□□ 0.22
VSX1-203ENST00000409285 EBI3Q14213 229 aa16.45■□□□□ 0.22
VSX1-203ENST00000409285 RTL8BQ17RB0 113 aa16.45■□□□□ 0.22
VSX1-203ENST00000409285 Q6YL49 198 aa16.45■□□□□ 0.22
VSX1-203ENST00000409285 GLDNQ6ZMI3 551 aaPredicted RBP16.45■□□□□ 0.22
VSX1-203ENST00000409285 SGPP2Q8IWX5 399 aa16.45■□□□□ 0.22
VSX1-203ENST00000409285 OR51H1Q8NH63 302 aa16.45■□□□□ 0.22
VSX1-203ENST00000409285 TRAV6A0A075B6T7 132 aa16.44■□□□□ 0.22
VSX1-203ENST00000409285 MDFIC2A0A1B0GVS7 189 aa16.44■□□□□ 0.22
VSX1-203ENST00000409285 VENTXO95231 258 aa16.44■□□□□ 0.22
VSX1-203ENST00000409285 H2AFB2P0C5Z0 115 aa16.44■□□□□ 0.22
VSX1-203ENST00000409285 FAM157CP0CG43 387 aa16.44■□□□□ 0.22
VSX1-203ENST00000409285 BRWD1-AS2P59051 145 aa16.44■□□□□ 0.22
VSX1-203ENST00000409285 SUPT4H1P63272 117 aaKnown RBP16.44■□□□□ 0.22
VSX1-203ENST00000409285 C11orf88Q6PI97 169 aa16.44■□□□□ 0.22
VSX1-203ENST00000409285 CCBE1Q6UXH8 406 aaPredicted RBP16.44■□□□□ 0.22
VSX1-203ENST00000409285 PIFOQ8TCI5 191 aa16.44■□□□□ 0.22
VSX1-203ENST00000409285 SLC35D1Q9NTN3 355 aa16.44■□□□□ 0.22
VSX1-203ENST00000409285 C3orf85A0A1B0GTC6 90 aa16.43■□□□□ 0.22
VSX1-203ENST00000409285 IER3P46695 156 aa16.43■□□□□ 0.22
VSX1-203ENST00000409285 OR4S2Q8NH73 311 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms