RNA–Protein interactions for RNA: ENST00000404008.6

USP42-202, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 1,380 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-202ENST00000404008 TMEM11P17152 192 aa23.47■■□□□ 1.35
USP42-202ENST00000404008 MC5RP33032 325 aa23.47■■□□□ 1.35
USP42-202ENST00000404008 THBS3P49746 956 aa23.47■■□□□ 1.35
USP42-202ENST00000404008 SCGB2B2Q4G0G5 96 aa23.47■■□□□ 1.35
USP42-202ENST00000404008 ZBTB34Q8NCN2 500 aa23.47■■□□□ 1.35
USP42-202ENST00000404008 OR2T10Q8NGZ9 312 aa23.47■■□□□ 1.35
USP42-202ENST00000404008 DEDD2Q8WXF8 326 aa23.47■■□□□ 1.35
USP42-202ENST00000404008 MOSP00540 346 aa23.46■■□□□ 1.35
USP42-202ENST00000404008 UCP3P55916 312 aa23.46■■□□□ 1.35
USP42-202ENST00000404008 RPL15P61313 204 aaKnown RBP23.46■■□□□ 1.35
USP42-202ENST00000404008 ZNF57Q68EA5 555 aaPredicted RBP23.46■■□□□ 1.35
USP42-202ENST00000404008 Q8N6K4 173 aa23.46■■□□□ 1.35
USP42-202ENST00000404008 TERB2Q8NHR7 220 aa23.46■■□□□ 1.35
USP42-202ENST00000404008 BORCS5Q969J3 196 aa23.46■■□□□ 1.35
USP42-202ENST00000404008 ADTRPQ96IZ2 230 aa23.46■■□□□ 1.35
USP42-202ENST00000404008 AKR1E2Q96JD6 320 aa23.46■■□□□ 1.35
USP42-202ENST00000404008 RBM14Q96PK6 669 aaKnown RBP23.46■■□□□ 1.35
USP42-202ENST00000404008 WDR12Q9GZL7 423 aaKnown RBP23.46■■□□□ 1.35
USP42-202ENST00000404008 HRASLSQ9HDD0 168 aa23.46■■□□□ 1.35
USP42-202ENST00000404008 RAB18Q9NP72 206 aa23.46■■□□□ 1.35
USP42-202ENST00000404008 WASHC3Q9Y3C0 194 aa23.46■■□□□ 1.35
USP42-202ENST00000404008 LINC00473A8K010 186 aa23.45■■□□□ 1.34
USP42-202ENST00000404008 OR2F2O95006 317 aa23.45■■□□□ 1.34
USP42-202ENST00000404008 FAUP35544 74 aaKnown RBP23.45■■□□□ 1.34
USP42-202ENST00000404008 PPP5CP53041 499 aa23.45■■□□□ 1.34
USP42-202ENST00000404008 HNF4GQ14541 408 aa23.45■■□□□ 1.34
USP42-202ENST00000404008 ZNF846Q147U1 533 aa23.45■■□□□ 1.34
USP42-202ENST00000404008 C16orf82Q7Z2V1 217 aa23.45■■□□□ 1.34
USP42-202ENST00000404008 BVESQ8NE79 360 aa23.45■■□□□ 1.34
USP42-202ENST00000404008 DDB2Q92466 427 aa23.45■■□□□ 1.34
USP42-202ENST00000404008 HSD17B10Q99714 261 aaKnown RBP23.45■■□□□ 1.34
USP42-202ENST00000404008 SLC25A33Q9BSK2 321 aa23.45■■□□□ 1.34
USP42-202ENST00000404008 CCDC32Q9BV29 185 aa23.45■■□□□ 1.34
USP42-202ENST00000404008 SLC2A8Q9NY64 477 aa23.45■■□□□ 1.34
USP42-202ENST00000404008 APOA2P02652 100 aa23.44■■□□□ 1.34
USP42-202ENST00000404008 CD40LGP29965 261 aa23.44■■□□□ 1.34
USP42-202ENST00000404008 INPP1P49441 399 aa23.44■■□□□ 1.34
USP42-202ENST00000404008 LPCAT3Q6P1A2 487 aa23.44■■□□□ 1.34
USP42-202ENST00000404008 OR51S1Q8NGJ8 323 aa23.44■■□□□ 1.34
USP42-202ENST00000404008 MRGPRFQ96AM1 343 aa23.44■■□□□ 1.34
USP42-202ENST00000404008 PRRT1Q99946 306 aa23.44■■□□□ 1.34
USP42-202ENST00000404008 RSRP1Q9BUV0 290 aa23.44■■□□□ 1.34
USP42-202ENST00000404008 MCUBQ9NWR8 336 aa23.44■■□□□ 1.34
USP42-202ENST00000404008 H7C2Y5 167 aa23.43■■□□□ 1.34
USP42-202ENST00000404008 TNFSF12O43508 249 aa23.43■■□□□ 1.34
USP42-202ENST00000404008 RPL30P62888 115 aaKnown RBP23.43■■□□□ 1.34
USP42-202ENST00000404008 TAGLNQ01995 201 aaKnown RBP23.43■■□□□ 1.34
USP42-202ENST00000404008 ZNF66Q6ZN08 573 aa23.43■■□□□ 1.34
USP42-202ENST00000404008 KCTD9Q7L273 389 aa23.43■■□□□ 1.34
USP42-202ENST00000404008 SLC38A6Q8IZM9 456 aa23.43■■□□□ 1.34
USP42-202ENST00000404008 GPHA2Q96T91 129 aa23.43■■□□□ 1.34
USP42-202ENST00000404008 DHRS7BQ6IAN0 325 aaPredicted RBP23.42■■□□□ 1.34
USP42-202ENST00000404008 PDPNQ86YL7 162 aa23.42■■□□□ 1.34
USP42-202ENST00000404008 SLC35D1Q9NTN3 355 aa23.42■■□□□ 1.34
USP42-202ENST00000404008 GPR31O00270 319 aa23.41■■□□□ 1.34
USP42-202ENST00000404008 IGKV1-16P04430 117 aa23.41■■□□□ 1.34
USP42-202ENST00000404008 IDO2Q6ZQW0 420 aa23.41■■□□□ 1.34
USP42-202ENST00000404008 RITA1Q96K30 269 aa23.41■■□□□ 1.34
USP42-202ENST00000404008 SCP2D1Q9UJQ7 156 aa23.41■■□□□ 1.34
USP42-202ENST00000404008 ECI1P42126 302 aa23.4■■□□□ 1.34
USP42-202ENST00000404008 KRTAP24-1Q3LI83 254 aa23.4■■□□□ 1.34
USP42-202ENST00000404008 CMTM1Q8IZ96 169 aa23.4■■□□□ 1.34
USP42-202ENST00000404008 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP23.4■■□□□ 1.34
USP42-202ENST00000404008 OR13C8Q8NGS7 320 aa23.4■■□□□ 1.34
USP42-202ENST00000404008 MOB4Q9Y3A3 225 aa23.4■■□□□ 1.34
USP42-202ENST00000404008 CRYBA1P05813 215 aa23.4■■□□□ 1.34
USP42-202ENST00000404008 PGAM2P15259 253 aa23.4■■□□□ 1.34
USP42-202ENST00000404008 RTL8BQ17RB0 113 aa23.4■■□□□ 1.34
USP42-202ENST00000404008 MARCH1Q8TCQ1 289 aa23.4■■□□□ 1.34
USP42-202ENST00000404008 TCTEX1D2Q8WW35 142 aa23.4■■□□□ 1.34
USP42-202ENST00000404008 PLSCR3Q9NRY6 295 aa23.4■■□□□ 1.34
USP42-202ENST00000404008 C1RLQ9NZP8 487 aa23.4■■□□□ 1.34
USP42-202ENST00000404008 PRELID3BQ9Y3B1 194 aa23.4■■□□□ 1.34
USP42-202ENST00000404008 RRASP10301 218 aa23.39■■□□□ 1.33
USP42-202ENST00000404008 PHLDA2Q53GA4 152 aa23.39■■□□□ 1.33
USP42-202ENST00000404008 OR8H1Q8NGG4 311 aa23.39■■□□□ 1.33
USP42-202ENST00000404008 TAF15Q92804 592 aaKnown RBP eCLIP23.39■■□□□ 1.33
USP42-202ENST00000404008 ZNF486Q96H40 463 aaPredicted RBP23.39■■□□□ 1.33
USP42-202ENST00000404008 PGLYRP1O75594 196 aaPredicted RBP23.38■■□□□ 1.33
USP42-202ENST00000404008 AMY1AP04745 511 aa23.38■■□□□ 1.33
USP42-202ENST00000404008 F2RL1P55085 397 aa23.38■■□□□ 1.33
USP42-202ENST00000404008 RELBQ01201 579 aa23.38■■□□□ 1.33
USP42-202ENST00000404008 SURF2Q15527 256 aaPredicted RBP23.38■■□□□ 1.33
USP42-202ENST00000404008 OR2B11Q5JQS5 317 aa23.38■■□□□ 1.33
USP42-202ENST00000404008 OR4C13Q8NGP0 309 aa23.38■■□□□ 1.33
USP42-202ENST00000404008 NPFFR1Q9GZQ6 430 aa23.38■■□□□ 1.33
USP42-202ENST00000404008 LINC00854A0A1B0GVQ3 168 aa23.37■■□□□ 1.33
USP42-202ENST00000404008 M0QZK8 103 aa23.37■■□□□ 1.33
USP42-202ENST00000404008 RLN1P04808 185 aa23.37■■□□□ 1.33
USP42-202ENST00000404008 BRWD1-AS2P59051 145 aa23.37■■□□□ 1.33
USP42-202ENST00000404008 CATR1Q13166 79 aa23.37■■□□□ 1.33
USP42-202ENST00000404008 CBX3Q13185 183 aa23.37■■□□□ 1.33
USP42-202ENST00000404008 C5orf56Q8N8D9 126 aa23.37■■□□□ 1.33
USP42-202ENST00000404008 ZFAND1Q8TCF1 268 aa23.37■■□□□ 1.33
USP42-202ENST00000404008 FLYWCH2Q96CP2 140 aaKnown RBP23.37■■□□□ 1.33
USP42-202ENST00000404008 RNF5Q99942 180 aa23.37■■□□□ 1.33
USP42-202ENST00000404008 SLC2A9Q9NRM0 540 aa23.37■■□□□ 1.33
USP42-202ENST00000404008 NAP1L6A6NFF2 107 aa23.36■■□□□ 1.33
USP42-202ENST00000404008 NCBP2LA6PVI3 153 aaKnown RBP23.36■■□□□ 1.33
USP42-202ENST00000404008 FGF16O43320 207 aa23.36■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 93.5 ms