RNA–Protein interactions for RNA: ENST00000403073.1

PTCHD3P3-201, Transcript of patched domain containing 3 pseudogene 3, humanhuman

BASIC

Gene PTCHD3P3, Length 906 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P3-201ENST00000403073 HERV-K104P61576 105 aa13.68□□□□□ -0.22
PTCHD3P3-201ENST00000403073 ZNF79Q15937 498 aa13.68□□□□□ -0.22
PTCHD3P3-201ENST00000403073 ACTBL2Q562R1 376 aa13.68□□□□□ -0.22
PTCHD3P3-201ENST00000403073 C11orf88Q6PI97 169 aa13.68□□□□□ -0.22
PTCHD3P3-201ENST00000403073 C12orf54Q6X4T0 127 aa13.68□□□□□ -0.22
PTCHD3P3-201ENST00000403073 C5orf56Q8N8D9 126 aa13.68□□□□□ -0.22
PTCHD3P3-201ENST00000403073 OR4D10Q8NGI6 311 aa13.68□□□□□ -0.22
PTCHD3P3-201ENST00000403073 RANBP3Q9H6Z4 567 aaPredicted RBP13.68□□□□□ -0.22
PTCHD3P3-201ENST00000403073 BATF3Q9NR55 127 aa13.68□□□□□ -0.22
PTCHD3P3-201ENST00000403073 WASHC3Q9Y3C0 194 aa13.68□□□□□ -0.22
PTCHD3P3-201ENST00000403073 LINC00473A8K010 186 aa13.67□□□□□ -0.22
PTCHD3P3-201ENST00000403073 DUTP33316 252 aaKnown RBP13.67□□□□□ -0.22
PTCHD3P3-201ENST00000403073 THBS3P49746 956 aa13.67□□□□□ -0.22
PTCHD3P3-201ENST00000403073 TAS2R19P59542 299 aa13.67□□□□□ -0.22
PTCHD3P3-201ENST00000403073 SSBP1Q04837 148 aaKnown RBP13.67□□□□□ -0.22
PTCHD3P3-201ENST00000403073 RNASE10Q5GAN6 216 aaKnown RBP13.67□□□□□ -0.22
PTCHD3P3-201ENST00000403073 C9orf152Q5JTZ5 239 aa13.67□□□□□ -0.22
PTCHD3P3-201ENST00000403073 SPANXN2Q5MJ10 180 aa13.67□□□□□ -0.22
PTCHD3P3-201ENST00000403073 VAX1Q5SQQ9 334 aa13.67□□□□□ -0.22
PTCHD3P3-201ENST00000403073 TMEM17Q86X19 198 aa13.67□□□□□ -0.22
PTCHD3P3-201ENST00000403073 Q8N9W7 124 aa13.67□□□□□ -0.22
PTCHD3P3-201ENST00000403073 BVESQ8NE79 360 aa13.67□□□□□ -0.22
PTCHD3P3-201ENST00000403073 MOB3AQ96BX8 217 aa13.67□□□□□ -0.22
PTCHD3P3-201ENST00000403073 GPHA2Q96T91 129 aa13.67□□□□□ -0.22
PTCHD3P3-201ENST00000403073 THAP7Q9BT49 309 aaPredicted RBP13.67□□□□□ -0.22
PTCHD3P3-201ENST00000403073 SLC35D1Q9NTN3 355 aa13.67□□□□□ -0.22
PTCHD3P3-201ENST00000403073 M0QZK8 103 aa13.66□□□□□ -0.22
PTCHD3P3-201ENST00000403073 HAX1O00165 279 aa13.66□□□□□ -0.22
PTCHD3P3-201ENST00000403073 TNFSF12O43508 249 aa13.66□□□□□ -0.22
PTCHD3P3-201ENST00000403073 PEX14O75381 377 aa13.66□□□□□ -0.22
PTCHD3P3-201ENST00000403073 RAB3DO95716 219 aa13.66□□□□□ -0.22
PTCHD3P3-201ENST00000403073 APOA2P02652 100 aa13.66□□□□□ -0.22
PTCHD3P3-201ENST00000403073 CD74P04233 296 aa13.66□□□□□ -0.22
PTCHD3P3-201ENST00000403073 IGKV1-16P04430 117 aa13.66□□□□□ -0.22
PTCHD3P3-201ENST00000403073 IFNA6P05013 189 aa13.66□□□□□ -0.22
PTCHD3P3-201ENST00000403073 ETV6P41212 452 aa13.66□□□□□ -0.22
PTCHD3P3-201ENST00000403073 RPL30P62888 115 aaKnown RBP13.66□□□□□ -0.22
PTCHD3P3-201ENST00000403073 EIF4EBP1Q13541 118 aaPredicted RBP13.66□□□□□ -0.22
PTCHD3P3-201ENST00000403073 STEAP1BQ6NZ63 245 aa13.66□□□□□ -0.22
PTCHD3P3-201ENST00000403073 ZNF818PQ6ZRF7 136 aa13.66□□□□□ -0.22
PTCHD3P3-201ENST00000403073 Q8N2B8 174 aa13.66□□□□□ -0.22
PTCHD3P3-201ENST00000403073 OR2T6Q8NHC8 308 aa13.66□□□□□ -0.22
PTCHD3P3-201ENST00000403073 DDB2Q92466 427 aa13.66□□□□□ -0.22
PTCHD3P3-201ENST00000403073 TAS2R8Q9NYW2 309 aa13.66□□□□□ -0.22
PTCHD3P3-201ENST00000403073 ZNF107Q9UII5 783 aaPredicted RBP13.66□□□□□ -0.22
PTCHD3P3-201ENST00000403073 RNF114Q9Y508 228 aa13.66□□□□□ -0.22
PTCHD3P3-201ENST00000403073 MMP24Q9Y5R2 645 aa13.66□□□□□ -0.22
PTCHD3P3-201ENST00000403073 FGF16O43320 207 aa13.65□□□□□ -0.22
PTCHD3P3-201ENST00000403073 CSF1P09603 554 aa13.65□□□□□ -0.22
PTCHD3P3-201ENST00000403073 TBPP20226 339 aa13.65□□□□□ -0.22
PTCHD3P3-201ENST00000403073 PTBP1P26599 531 aaKnown RBP eCLIP13.65□□□□□ -0.22
PTCHD3P3-201ENST00000403073 GNRHRP30968 328 aa13.65□□□□□ -0.22
PTCHD3P3-201ENST00000403073 MMDQ15546 238 aa13.65□□□□□ -0.22
PTCHD3P3-201ENST00000403073 ARSJQ5FYB0 599 aaPredicted RBP13.65□□□□□ -0.22
PTCHD3P3-201ENST00000403073 FAAP20Q6NZ36 180 aa13.65□□□□□ -0.22
PTCHD3P3-201ENST00000403073 PDPNQ86YL7 162 aa13.65□□□□□ -0.22
PTCHD3P3-201ENST00000403073 Q8N402 240 aa13.65□□□□□ -0.22
PTCHD3P3-201ENST00000403073 MFSD4AQ8N468 514 aa13.65□□□□□ -0.22
PTCHD3P3-201ENST00000403073 OR8H1Q8NGG4 311 aa13.65□□□□□ -0.22
PTCHD3P3-201ENST00000403073 ADTRPQ96IZ2 230 aa13.65□□□□□ -0.22
PTCHD3P3-201ENST00000403073 FXYD6Q9H0Q3 95 aa13.65□□□□□ -0.22
PTCHD3P3-201ENST00000403073 SERTAD4Q9NUC0 356 aa13.65□□□□□ -0.22
PTCHD3P3-201ENST00000403073 A0A1B0GUS0 222 aa13.64□□□□□ -0.23
PTCHD3P3-201ENST00000403073 ANKRD20A5PA0PJZ0 165 aa13.64□□□□□ -0.23
PTCHD3P3-201ENST00000403073 RPS16P62249 146 aaKnown RBP13.64□□□□□ -0.23
PTCHD3P3-201ENST00000403073 MSMO1Q15800 293 aa13.64□□□□□ -0.23
PTCHD3P3-201ENST00000403073 TMEM95Q3KNT9 176 aa13.64□□□□□ -0.23
PTCHD3P3-201ENST00000403073 OR2B11Q5JQS5 317 aa13.64□□□□□ -0.23
PTCHD3P3-201ENST00000403073 AADACL3Q5VUY0 350 aa13.64□□□□□ -0.23
PTCHD3P3-201ENST00000403073 C3orf56Q8N813 242 aa13.64□□□□□ -0.23
PTCHD3P3-201ENST00000403073 ZBTB34Q8NCN2 500 aa13.64□□□□□ -0.23
PTCHD3P3-201ENST00000403073 NPBQ8NG41 125 aa13.64□□□□□ -0.23
PTCHD3P3-201ENST00000403073 FLYWCH2Q96CP2 140 aaKnown RBP13.64□□□□□ -0.23
PTCHD3P3-201ENST00000403073 HSD17B10Q99714 261 aaKnown RBP13.64□□□□□ -0.23
PTCHD3P3-201ENST00000403073 RASL11BQ9BPW5 248 aa13.64□□□□□ -0.23
PTCHD3P3-201ENST00000403073 LINC01548A6NM66 108 aa13.63□□□□□ -0.23
PTCHD3P3-201ENST00000403073 NBR2O15453 112 aa13.63□□□□□ -0.23
PTCHD3P3-201ENST00000403073 FCGR3BO75015 233 aa13.63□□□□□ -0.23
PTCHD3P3-201ENST00000403073 ZNF735P0CB33 412 aa13.63□□□□□ -0.23
PTCHD3P3-201ENST00000403073 AKAIN1P0CW23 69 aa13.63□□□□□ -0.23
PTCHD3P3-201ENST00000403073 PROK1P58294 105 aa13.63□□□□□ -0.23
PTCHD3P3-201ENST00000403073 TAGLNQ01995 201 aaKnown RBP13.63□□□□□ -0.23
PTCHD3P3-201ENST00000403073 RTL8BQ17RB0 113 aa13.63□□□□□ -0.23
PTCHD3P3-201ENST00000403073 ZNF66Q6ZN08 573 aa13.63□□□□□ -0.23
PTCHD3P3-201ENST00000403073 KCTD9Q7L273 389 aa13.63□□□□□ -0.23
PTCHD3P3-201ENST00000403073 ARRDC1Q8N5I2 433 aa13.63□□□□□ -0.23
PTCHD3P3-201ENST00000403073 FAM71E2Q8N5Q1 922 aa13.63□□□□□ -0.23
PTCHD3P3-201ENST00000403073 SPATA3Q8NHX4 192 aa13.63□□□□□ -0.23
PTCHD3P3-201ENST00000403073 TCTEX1D2Q8WW35 142 aa13.63□□□□□ -0.23
PTCHD3P3-201ENST00000403073 RNF5Q99942 180 aa13.63□□□□□ -0.23
PTCHD3P3-201ENST00000403073 SRRQ9GZT4 340 aa13.63□□□□□ -0.23
PTCHD3P3-201ENST00000403073 LIN7CQ9NUP9 197 aaKnown RBP13.63□□□□□ -0.23
PTCHD3P3-201ENST00000403073 RRASP10301 218 aa13.62□□□□□ -0.23
PTCHD3P3-201ENST00000403073 VDAC2P45880 294 aaPredicted RBP13.62□□□□□ -0.23
PTCHD3P3-201ENST00000403073 BRWD1-AS2P59051 145 aa13.62□□□□□ -0.23
PTCHD3P3-201ENST00000403073 KRTAP10-3P60369 221 aa13.62□□□□□ -0.23
PTCHD3P3-201ENST00000403073 SRSF4Q08170 494 aaKnown RBP13.62□□□□□ -0.23
PTCHD3P3-201ENST00000403073 MEF2DQ14814 521 aa13.62□□□□□ -0.23
PTCHD3P3-201ENST00000403073 PSG5Q15238 335 aa13.62□□□□□ -0.23
PTCHD3P3-201ENST00000403073 SCGB2B2Q4G0G5 96 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms