RNA–Protein interactions for RNA: ENST00000400060.8

PTPRM-203, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 5 BASIC

Gene PTPRM, Length 5,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-203ENST00000400060 TMEM256Q8N2U0 113 aa8.59□□□□□ -1.03
PTPRM-203ENST00000400060 FAM169BQ8N8A8 192 aa8.59□□□□□ -1.03
PTPRM-203ENST00000400060 LRRC75AQ8NAA5 344 aa8.59□□□□□ -1.03
PTPRM-203ENST00000400060 FGF22Q9HCT0 170 aa8.59□□□□□ -1.03
PTPRM-203ENST00000400060 A0A0G2JLM5 398 aa8.58□□□□□ -1.04
PTPRM-203ENST00000400060 TNFSF14O43557 240 aa8.58□□□□□ -1.04
PTPRM-203ENST00000400060 CEACAM8P31997 349 aaPredicted RBP8.58□□□□□ -1.04
PTPRM-203ENST00000400060 RAB9AP51151 201 aa8.58□□□□□ -1.04
PTPRM-203ENST00000400060 METAP1P53582 386 aa8.58□□□□□ -1.04
PTPRM-203ENST00000400060 UBE2L3P68036 154 aaKnown RBP8.58□□□□□ -1.04
PTPRM-203ENST00000400060 MRGPRFQ96AM1 343 aa8.58□□□□□ -1.04
PTPRM-203ENST00000400060 NPVFQ9HCQ7 196 aa8.58□□□□□ -1.04
PTPRM-203ENST00000400060 CENPVL1A0A0U1RR11 272 aa8.58□□□□□ -1.04
PTPRM-203ENST00000400060 FAM157AC9JC47 383 aa8.58□□□□□ -1.04
PTPRM-203ENST00000400060 TMPRSS2O15393 492 aa8.58□□□□□ -1.04
PTPRM-203ENST00000400060 MPZL1O95297 269 aa8.58□□□□□ -1.04
PTPRM-203ENST00000400060 CD38P28907 300 aa8.58□□□□□ -1.04
PTPRM-203ENST00000400060 CA7P43166 264 aa8.58□□□□□ -1.04
PTPRM-203ENST00000400060 NMUP48645 174 aa8.58□□□□□ -1.04
PTPRM-203ENST00000400060 HERVK_113P61574 105 aa8.58□□□□□ -1.04
PTPRM-203ENST00000400060 ARL16Q0P5N6 197 aa8.58□□□□□ -1.04
PTPRM-203ENST00000400060 LINC01559Q495D7 138 aa8.58□□□□□ -1.04
PTPRM-203ENST00000400060 ZNF611Q8N823 705 aa8.58□□□□□ -1.04
PTPRM-203ENST00000400060 FOXQ1Q9C009 403 aa8.58□□□□□ -1.04
PTPRM-203ENST00000400060 K7EP34 96 aa8.58□□□□□ -1.04
PTPRM-203ENST00000400060 P04436 131 aa8.58□□□□□ -1.04
PTPRM-203ENST00000400060 SAXO1Q8IYX7 474 aa8.58□□□□□ -1.04
PTPRM-203ENST00000400060 MUC15Q8N387 334 aa8.58□□□□□ -1.04
PTPRM-203ENST00000400060 LRRC61Q9BV99 259 aa8.58□□□□□ -1.04
PTPRM-203ENST00000400060 GEMIN7Q9H840 131 aaKnown RBP8.58□□□□□ -1.04
PTPRM-203ENST00000400060 MCM3APO60318 1980 aa8.58□□□□□ -1.04
PTPRM-203ENST00000400060 A0A1B0GWB2 263 aa8.58□□□□□ -1.04
PTPRM-203ENST00000400060 ZNF205O95201 554 aa8.58□□□□□ -1.04
PTPRM-203ENST00000400060 SRSF7Q16629 238 aaKnown RBP eCLIP8.58□□□□□ -1.04
PTPRM-203ENST00000400060 OR8A1Q8NGG7 326 aa8.58□□□□□ -1.04
PTPRM-203ENST00000400060 HSD17B10Q99714 261 aaKnown RBP8.58□□□□□ -1.04
PTPRM-203ENST00000400060 AURKAIP1Q9NWT8 199 aaPredicted RBP8.58□□□□□ -1.04
PTPRM-203ENST00000400060 FBLL1A6NHQ2 334 aaKnown RBP8.57□□□□□ -1.04
PTPRM-203ENST00000400060 CT62P0C5K7 136 aa8.57□□□□□ -1.04
PTPRM-203ENST00000400060 C3orf79P0CE67 100 aa8.57□□□□□ -1.04
PTPRM-203ENST00000400060 RBX1P62877 108 aa8.57□□□□□ -1.04
PTPRM-203ENST00000400060 SAMD5Q5TGI4 173 aa8.57□□□□□ -1.04
PTPRM-203ENST00000400060 GNB4Q9HAV0 340 aa8.57□□□□□ -1.04
PTPRM-203ENST00000400060 MRPL16Q9NX20 251 aaKnown RBP8.57□□□□□ -1.04
PTPRM-203ENST00000400060 COL4A5P29400 1685 aa8.57□□□□□ -1.04
PTPRM-203ENST00000400060 COL9A2Q14055 689 aaPredicted RBP8.57□□□□□ -1.04
PTPRM-203ENST00000400060 PDPNQ86YL7 162 aa8.57□□□□□ -1.04
PTPRM-203ENST00000400060 ABHD14AQ9BUJ0 271 aa8.57□□□□□ -1.04
PTPRM-203ENST00000400060 RTN4RQ9BZR6 473 aa8.57□□□□□ -1.04
PTPRM-203ENST00000400060 CLEC5AQ9NY25 188 aa8.57□□□□□ -1.04
PTPRM-203ENST00000400060 C2orf72A6NCS6 295 aa8.57□□□□□ -1.04
PTPRM-203ENST00000400060 IL4P05112 153 aa8.57□□□□□ -1.04
PTPRM-203ENST00000400060 TIMP3P35625 211 aa8.57□□□□□ -1.04
PTPRM-203ENST00000400060 MYBPHQ13203 477 aa8.57□□□□□ -1.04
PTPRM-203ENST00000400060 CD300EQ496F6 205 aaPredicted RBP8.57□□□□□ -1.04
PTPRM-203ENST00000400060 NDFIP1Q9BT67 221 aa8.57□□□□□ -1.04
PTPRM-203ENST00000400060 TPPP3Q9BW30 176 aa8.57□□□□□ -1.04
PTPRM-203ENST00000400060 NPCDR1Q9BY65 106 aa8.57□□□□□ -1.04
PTPRM-203ENST00000400060 MRPL32Q9BYC8 188 aaKnown RBP8.57□□□□□ -1.04
PTPRM-203ENST00000400060 IL36GQ9NZH8 169 aa8.57□□□□□ -1.04
PTPRM-203ENST00000400060 NINQ8N4C6 2090 aa8.57□□□□□ -1.04
PTPRM-203ENST00000400060 PLXNA1Q9UIW2 1896 aa8.57□□□□□ -1.04
PTPRM-203ENST00000400060 TTC3P53804 2025 aa8.57□□□□□ -1.04
PTPRM-203ENST00000400060 IGLC7A0M8Q6 106 aa8.57□□□□□ -1.04
PTPRM-203ENST00000400060 PSMB11A5LHX3 300 aa8.57□□□□□ -1.04
PTPRM-203ENST00000400060 PGPEP1LA6NFU8 196 aa8.57□□□□□ -1.04
PTPRM-203ENST00000400060 C9orf118A6NHY6 69 aa8.57□□□□□ -1.04
PTPRM-203ENST00000400060 GCHFRP30047 84 aa8.57□□□□□ -1.04
PTPRM-203ENST00000400060 OPRK1P41145 380 aa8.57□□□□□ -1.04
PTPRM-203ENST00000400060 DEFB133Q30KQ1 61 aa8.57□□□□□ -1.04
PTPRM-203ENST00000400060 STPG4Q8N801 248 aa8.57□□□□□ -1.04
PTPRM-203ENST00000400060 RDH5Q92781 318 aa8.57□□□□□ -1.04
PTPRM-203ENST00000400060 ATP23Q9Y6H3 246 aa8.57□□□□□ -1.04
PTPRM-203ENST00000400060 ARL14EPLP0DKL9 152 aa8.56□□□□□ -1.04
PTPRM-203ENST00000400060 LYSMD4Q5XG99 296 aa8.56□□□□□ -1.04
PTPRM-203ENST00000400060 HDHD3Q9BSH5 251 aaPredicted RBP8.56□□□□□ -1.04
PTPRM-203ENST00000400060 TBC1D29Q9UFV1 150 aa8.56□□□□□ -1.04
PTPRM-203ENST00000400060 DOCK5Q9H7D0 1870 aa8.56□□□□□ -1.04
PTPRM-203ENST00000400060 NRXN2Q9P2S2 1712 aa8.56□□□□□ -1.04
PTPRM-203ENST00000400060 SAA2-SAA4A0A096LPE2 208 aa8.56□□□□□ -1.04
PTPRM-203ENST00000400060 TRGV10A0A0A0MS01 117 aa8.56□□□□□ -1.04
PTPRM-203ENST00000400060 LILRA6Q6PI73 481 aa8.56□□□□□ -1.04
PTPRM-203ENST00000400060 BATF2Q8N1L9 274 aa8.56□□□□□ -1.04
PTPRM-203ENST00000400060 OR52E5Q8NH55 327 aa8.56□□□□□ -1.04
PTPRM-203ENST00000400060 ELSPBP1Q96BH3 223 aa8.56□□□□□ -1.04
PTPRM-203ENST00000400060 GNG3P63215 75 aa8.56□□□□□ -1.04
PTPRM-203ENST00000400060 CSRP2Q16527 193 aa8.56□□□□□ -1.04
PTPRM-203ENST00000400060 PSG3Q16557 428 aa8.56□□□□□ -1.04
PTPRM-203ENST00000400060 MPV17L2Q567V2 206 aa8.56□□□□□ -1.04
PTPRM-203ENST00000400060 ZNF766Q5HY98 468 aa8.56□□□□□ -1.04
PTPRM-203ENST00000400060 KCNK17Q96T54 332 aa8.56□□□□□ -1.04
PTPRM-203ENST00000400060 GTSF1LQ9H1H1 148 aa8.56□□□□□ -1.04
PTPRM-203ENST00000400060 IGKV1D-42A0A075B6H8 117 aa8.56□□□□□ -1.04
PTPRM-203ENST00000400060 MRPL33O75394 65 aaKnown RBP8.56□□□□□ -1.04
PTPRM-203ENST00000400060 CER1O95813 267 aa8.56□□□□□ -1.04
PTPRM-203ENST00000400060 PRSS1P07477 247 aa8.56□□□□□ -1.04
PTPRM-203ENST00000400060 CRYBB3P26998 211 aa8.56□□□□□ -1.04
PTPRM-203ENST00000400060 TWIST1Q15672 202 aa8.56□□□□□ -1.04
PTPRM-203ENST00000400060 Q1RN00 199 aa8.56□□□□□ -1.04
PTPRM-203ENST00000400060 CEACAM16Q2WEN9 425 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms