RNA–Protein interactions for RNA: ENST00000399617.5

CACNA1C-211, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1C, Length 7,482 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-211ENST00000399617 S1PR2O95136 353 aa11.78□□□□□ -0.52
CACNA1C-211ENST00000399617 PRB1P04280 392 aa11.78□□□□□ -0.52
CACNA1C-211ENST00000399617 RNF212Q495C1 297 aa11.78□□□□□ -0.52
CACNA1C-211ENST00000399617 NPPCP23582 126 aa11.78□□□□□ -0.52
CACNA1C-211ENST00000399617 KIR3DL3Q8N743 410 aa11.78□□□□□ -0.52
CACNA1C-211ENST00000399617 CACNA1CQ13936 2221 aa11.78□□□□□ -0.52
CACNA1C-211ENST00000399617 PGPA6NDG6 321 aa11.78□□□□□ -0.52
CACNA1C-211ENST00000399617 TGFBR3LH3BV60 316 aa11.78□□□□□ -0.52
CACNA1C-211ENST00000399617 MDKP21741 143 aaPredicted RBP11.78□□□□□ -0.52
CACNA1C-211ENST00000399617 HMGA2P52926 109 aa11.78□□□□□ -0.52
CACNA1C-211ENST00000399617 UNC119Q13432 240 aa11.78□□□□□ -0.52
CACNA1C-211ENST00000399617 BRD3OSQ6XYD6 125 aa11.78□□□□□ -0.52
CACNA1C-211ENST00000399617 APCDD1LQ8NCL9 501 aa11.78□□□□□ -0.52
CACNA1C-211ENST00000399617 GSX2Q9BZM3 304 aa11.78□□□□□ -0.52
CACNA1C-211ENST00000399617 AKIP1Q9NQ31 210 aa11.78□□□□□ -0.52
CACNA1C-211ENST00000399617 ATP6V1FQ16864 119 aa11.78□□□□□ -0.52
CACNA1C-211ENST00000399617 MIC13Q5XKP0 118 aa11.78□□□□□ -0.52
CACNA1C-211ENST00000399617 SYT8Q8NBV8 401 aa11.78□□□□□ -0.52
CACNA1C-211ENST00000399617 C10orf35Q96D05 121 aa11.78□□□□□ -0.52
CACNA1C-211ENST00000399617 DUX3Q96PT4 197 aa11.78□□□□□ -0.52
CACNA1C-211ENST00000399617 PXMP4Q9Y6I8 212 aa11.78□□□□□ -0.52
CACNA1C-211ENST00000399617 ZNF883P0CG24 379 aa11.78□□□□□ -0.52
CACNA1C-211ENST00000399617 C8orf46Q8TAG6 207 aa11.78□□□□□ -0.52
CACNA1C-211ENST00000399617 CYB5R1Q9UHQ9 305 aa11.78□□□□□ -0.52
CACNA1C-211ENST00000399617 FOXD3Q9UJU5 478 aaPredicted RBP11.78□□□□□ -0.52
CACNA1C-211ENST00000399617 HSF4Q9ULV5 492 aa11.78□□□□□ -0.52
CACNA1C-211ENST00000399617 NPIPB11E5RHQ5 1161 aa11.77□□□□□ -0.52
CACNA1C-211ENST00000399617 MAS1LP35410 378 aa11.77□□□□□ -0.52
CACNA1C-211ENST00000399617 MEOX2P50222 304 aa11.77□□□□□ -0.52
CACNA1C-211ENST00000399617 CD300LDQ6UXZ3 194 aa11.77□□□□□ -0.52
CACNA1C-211ENST00000399617 LHFPL4Q7Z7J7 247 aa11.77□□□□□ -0.52
CACNA1C-211ENST00000399617 CALHM1Q8IU99 346 aa11.77□□□□□ -0.52
CACNA1C-211ENST00000399617 LINC00596Q86U02 117 aa11.77□□□□□ -0.52
CACNA1C-211ENST00000399617 C3orf56Q8N813 242 aa11.77□□□□□ -0.52
CACNA1C-211ENST00000399617 UNC13CQ8NB66 2214 aa11.77□□□□□ -0.53
CACNA1C-211ENST00000399617 THBDP07204 575 aa11.77□□□□□ -0.53
CACNA1C-211ENST00000399617 LINC01587Q99440 93 aa11.77□□□□□ -0.53
CACNA1C-211ENST00000399617 NEURL2Q9BR09 285 aa11.77□□□□□ -0.53
CACNA1C-211ENST00000399617 DEPPQ9NTK1 212 aa11.77□□□□□ -0.53
CACNA1C-211ENST00000399617 SCN2AQ99250 2005 aa11.77□□□□□ -0.53
CACNA1C-211ENST00000399617 M0R3E3 92 aa11.77□□□□□ -0.53
CACNA1C-211ENST00000399617 KLF4O43474 513 aa11.77□□□□□ -0.53
CACNA1C-211ENST00000399617 IL24Q13007 206 aa11.77□□□□□ -0.53
CACNA1C-211ENST00000399617 FAM24BQ8N5W8 94 aa11.77□□□□□ -0.53
CACNA1C-211ENST00000399617 OR1N2Q8NGR9 330 aa11.77□□□□□ -0.53
CACNA1C-211ENST00000399617 FOXA2Q9Y261 457 aaPredicted RBP11.77□□□□□ -0.53
CACNA1C-211ENST00000399617 NDUFA2O43678 99 aa11.77□□□□□ -0.53
CACNA1C-211ENST00000399617 C1QL2Q7Z5L3 287 aa11.77□□□□□ -0.53
CACNA1C-211ENST00000399617 NEU4Q8WWR8 484 aaPredicted RBP11.77□□□□□ -0.53
CACNA1C-211ENST00000399617 COL25A1Q9BXS0 654 aaPredicted RBP11.77□□□□□ -0.53
CACNA1C-211ENST00000399617 PHLDA3Q9Y5J5 127 aa11.77□□□□□ -0.53
CACNA1C-211ENST00000399617 PPP1R27Q86WC6 154 aa11.77□□□□□ -0.53
CACNA1C-211ENST00000399617 PRSS23O95084 383 aa11.76□□□□□ -0.53
CACNA1C-211ENST00000399617 IER3P46695 156 aa11.76□□□□□ -0.53
CACNA1C-211ENST00000399617 CLDN18P56856 261 aa11.76□□□□□ -0.53
CACNA1C-211ENST00000399617 KLRD1Q13241 179 aa11.76□□□□□ -0.53
CACNA1C-211ENST00000399617 OR5AU1Q8NGC0 362 aa11.76□□□□□ -0.53
CACNA1C-211ENST00000399617 SNRPD3P62318 126 aaKnown RBP11.76□□□□□ -0.53
CACNA1C-211ENST00000399617 RPL24P83731 157 aaKnown RBP11.76□□□□□ -0.53
CACNA1C-211ENST00000399617 RIGQ13278 110 aa11.76□□□□□ -0.53
CACNA1C-211ENST00000399617 C1QL1O75973 258 aa11.76□□□□□ -0.53
CACNA1C-211ENST00000399617 IL4P05112 153 aa11.76□□□□□ -0.53
CACNA1C-211ENST00000399617 CCKARP32238 428 aa11.76□□□□□ -0.53
CACNA1C-211ENST00000399617 DLX1P56177 255 aa11.76□□□□□ -0.53
CACNA1C-211ENST00000399617 PRSS54Q6PEW0 395 aa11.76□□□□□ -0.53
CACNA1C-211ENST00000399617 MMD2Q8IY49 270 aa11.76□□□□□ -0.53
CACNA1C-211ENST00000399617 MYOZ3Q8TDC0 251 aa11.76□□□□□ -0.53
CACNA1C-211ENST00000399617 QTRT1Q9BXR0 403 aaKnown RBP11.76□□□□□ -0.53
CACNA1C-211ENST00000399617 CBLN4Q9NTU7 201 aa11.76□□□□□ -0.53
CACNA1C-211ENST00000399617 FBXL7Q9UJT9 491 aa11.76□□□□□ -0.53
CACNA1C-211ENST00000399617 HIST1H1BP16401 226 aaKnown RBP11.76□□□□□ -0.53
CACNA1C-211ENST00000399617 Q0VFX4 171 aa11.76□□□□□ -0.53
CACNA1C-211ENST00000399617 TAS2R60P59551 318 aa11.76□□□□□ -0.53
CACNA1C-211ENST00000399617 LYRM7Q5U5X0 104 aa11.76□□□□□ -0.53
CACNA1C-211ENST00000399617 RHOVQ96L33 236 aa11.76□□□□□ -0.53
CACNA1C-211ENST00000399617 PGLYRP4Q96LB8 373 aa11.76□□□□□ -0.53
CACNA1C-211ENST00000399617 COL24A1Q17RW2 1714 aa11.76□□□□□ -0.53
CACNA1C-211ENST00000399617 IGF2P01344 180 aa11.76□□□□□ -0.53
CACNA1C-211ENST00000399617 IL17RELQ6ZVW7 336 aa11.76□□□□□ -0.53
CACNA1C-211ENST00000399617 MIEN1Q9BRT3 115 aa11.76□□□□□ -0.53
CACNA1C-211ENST00000399617 IGKV1D-43A0A0B4J1Z2 117 aa11.75□□□□□ -0.53
CACNA1C-211ENST00000399617 EIF4EBP2Q13542 120 aaPredicted RBP11.75□□□□□ -0.53
CACNA1C-211ENST00000399617 TBX15Q96SF7 602 aa11.75□□□□□ -0.53
CACNA1C-211ENST00000399617 MFAP2P55001 183 aa11.75□□□□□ -0.53
CACNA1C-211ENST00000399617 WFIKKN1Q96NZ8 548 aa11.75□□□□□ -0.53
CACNA1C-211ENST00000399617 GPX7Q96SL4 187 aaPredicted RBP11.75□□□□□ -0.53
CACNA1C-211ENST00000399617 SLC25A33Q9BSK2 321 aa11.75□□□□□ -0.53
CACNA1C-211ENST00000399617 RP1L1Q8IWN7 2480 aaPredicted RBP11.75□□□□□ -0.53
CACNA1C-211ENST00000399617 IGKV3D-20A0A0C4DH25 116 aa11.75□□□□□ -0.53
CACNA1C-211ENST00000399617 DEFB104AQ8WTQ1 72 aa11.75□□□□□ -0.53
CACNA1C-211ENST00000399617 SIPA1L3O60292 1781 aaPredicted RBP11.75□□□□□ -0.53
CACNA1C-211ENST00000399617 UBE2V2Q15819 145 aa11.75□□□□□ -0.53
CACNA1C-211ENST00000399617 EIF4E3Q8N5X7 224 aaKnown RBP11.75□□□□□ -0.53
CACNA1C-211ENST00000399617 KCNK7Q9Y2U2 307 aa11.75□□□□□ -0.53
CACNA1C-211ENST00000399617 PMS2P11Q13670 270 aa11.75□□□□□ -0.53
CACNA1C-211ENST00000399617 LHFPL5Q8TAF8 219 aa11.75□□□□□ -0.53
CACNA1C-211ENST00000399617 TOLLIPQ9H0E2 274 aa11.75□□□□□ -0.53
CACNA1C-211ENST00000399617 IFT22Q9H7X7 185 aa11.75□□□□□ -0.53
CACNA1C-211ENST00000399617 MDC1Q14676 2089 aaKnown RBP11.74□□□□□ -0.53
CACNA1C-211ENST00000399617 RNASE4P34096 147 aaKnown RBP11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms