RNA–Protein interactions for RNA: ENST00000397102.5

SEC13-206, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-206ENST00000397102 TMPRSS11AQ6ZMR5 421 aa11.21□□□□□ -0.61
SEC13-206ENST00000397102 MOB1BQ7L9L4 216 aa11.21□□□□□ -0.61
SEC13-206ENST00000397102 LYG2Q86SG7 212 aa11.21□□□□□ -0.61
SEC13-206ENST00000397102 ADAD2Q8NCV1 583 aaKnown RBP11.21□□□□□ -0.61
SEC13-206ENST00000397102 FAAP24Q9BTP7 215 aa11.21□□□□□ -0.61
SEC13-206ENST00000397102 FGF20Q9NP95 211 aaPredicted RBP11.21□□□□□ -0.61
SEC13-206ENST00000397102 GHRLQ9UBU3 117 aa11.21□□□□□ -0.61
SEC13-206ENST00000397102 TRBV5-7A0A0A0MS05 114 aa11.2□□□□□ -0.62
SEC13-206ENST00000397102 C2orf70A6NJV1 201 aa11.2□□□□□ -0.62
SEC13-206ENST00000397102 FAM223BA6NKX1 122 aa11.2□□□□□ -0.62
SEC13-206ENST00000397102 OR9G9P0C7N8 305 aa11.2□□□□□ -0.62
SEC13-206ENST00000397102 FOLR2P14207 255 aa11.2□□□□□ -0.62
SEC13-206ENST00000397102 ATF4P18848 351 aaPredicted RBP11.2□□□□□ -0.62
SEC13-206ENST00000397102 ZBTB25P24278 435 aa11.2□□□□□ -0.62
SEC13-206ENST00000397102 CEACAM6P40199 344 aa11.2□□□□□ -0.62
SEC13-206ENST00000397102 ETV1P50549 477 aa11.2□□□□□ -0.62
SEC13-206ENST00000397102 C1orf146Q5VVC0 180 aa11.2□□□□□ -0.62
SEC13-206ENST00000397102 C6orf201Q7Z4U5 140 aa11.2□□□□□ -0.62
SEC13-206ENST00000397102 FAM223AQ8IWN6 122 aa11.2□□□□□ -0.62
SEC13-206ENST00000397102 SETD6Q8TBK2 473 aa11.2□□□□□ -0.62
SEC13-206ENST00000397102 PTX4Q96A99 478 aa11.2□□□□□ -0.62
SEC13-206ENST00000397102 PHB2Q99623 299 aa11.2□□□□□ -0.62
SEC13-206ENST00000397102 CHMP1AQ9HD42 196 aaPredicted RBP11.2□□□□□ -0.62
SEC13-206ENST00000397102 AKIP1Q9NQ31 210 aa11.2□□□□□ -0.62
SEC13-206ENST00000397102 SLC35D1Q9NTN3 355 aa11.2□□□□□ -0.62
SEC13-206ENST00000397102 BABAM2Q9NXR7 383 aa11.2□□□□□ -0.62
SEC13-206ENST00000397102 OR1A1Q9P1Q5 309 aa11.2□□□□□ -0.62
SEC13-206ENST00000397102 ZNF230Q9UIE0 474 aaPredicted RBP11.2□□□□□ -0.62
SEC13-206ENST00000397102 ZNF221Q9UK13 617 aa11.2□□□□□ -0.62
SEC13-206ENST00000397102 TP53TG1Q9Y2A0 90 aa11.2□□□□□ -0.62
SEC13-206ENST00000397102 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.19□□□□□ -0.62
SEC13-206ENST00000397102 A0A1W2PPK0 400 aa11.19□□□□□ -0.62
SEC13-206ENST00000397102 TUSC2O75896 110 aa11.19□□□□□ -0.62
SEC13-206ENST00000397102 LALBAP00709 142 aa11.19□□□□□ -0.62
SEC13-206ENST00000397102 APELAP0DMC3 54 aa11.19□□□□□ -0.62
SEC13-206ENST00000397102 EDN2P20800 178 aa11.19□□□□□ -0.62
SEC13-206ENST00000397102 RHOGP84095 191 aa11.19□□□□□ -0.62
SEC13-206ENST00000397102 NKAIN3Q8N8D7 197 aa11.19□□□□□ -0.62
SEC13-206ENST00000397102 THRSPQ92748 146 aa11.19□□□□□ -0.62
SEC13-206ENST00000397102 PGLYRP3Q96LB9 341 aa11.19□□□□□ -0.62
SEC13-206ENST00000397102 UQCC2Q9BRT2 126 aa11.19□□□□□ -0.62
SEC13-206ENST00000397102 RYR1P21817 5038 aa11.19□□□□□ -0.62
SEC13-206ENST00000397102 TRBV6-6A0A0A6YYG2 114 aa11.18□□□□□ -0.62
SEC13-206ENST00000397102 LGALS9O00182 355 aa11.18□□□□□ -0.62
SEC13-206ENST00000397102 DCKP27707 260 aa11.18□□□□□ -0.62
SEC13-206ENST00000397102 BMI1P35226 326 aa11.18□□□□□ -0.62
SEC13-206ENST00000397102 HLA-DRB3P79483 266 aa11.18□□□□□ -0.62
SEC13-206ENST00000397102 ATP5G2Q06055 141 aa11.18□□□□□ -0.62
SEC13-206ENST00000397102 FAM209BQ5JX69 171 aa11.18□□□□□ -0.62
SEC13-206ENST00000397102 OR52B4Q8NGK2 314 aa11.18□□□□□ -0.62
SEC13-206ENST00000397102 KCNG3Q8TAE7 436 aa11.18□□□□□ -0.62
SEC13-206ENST00000397102 HARBI1Q96MB7 349 aa11.18□□□□□ -0.62
SEC13-206ENST00000397102 SLC29A1Q99808 456 aa11.18□□□□□ -0.62
SEC13-206ENST00000397102 TRBV9A0A0B4J1U6 114 aa11.17□□□□□ -0.62
SEC13-206ENST00000397102 MSGN1A6NI15 193 aa11.17□□□□□ -0.62
SEC13-206ENST00000397102 M0R1X1 148 aa11.17□□□□□ -0.62
SEC13-206ENST00000397102 DYNC1I1O14576 645 aa11.17□□□□□ -0.62
SEC13-206ENST00000397102 UBBP0CG47 229 aa11.17□□□□□ -0.62
SEC13-206ENST00000397102 MRGPRG-AS1Q2M3A8 158 aa11.17□□□□□ -0.62
SEC13-206ENST00000397102 Q6ZWC4 215 aa11.17□□□□□ -0.62
SEC13-206ENST00000397102 TMEM61Q8N0U2 210 aa11.17□□□□□ -0.62
SEC13-206ENST00000397102 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.17□□□□□ -0.62
SEC13-206ENST00000397102 APH1BQ8WW43 257 aa11.17□□□□□ -0.62
SEC13-206ENST00000397102 RIMS4Q9H426 269 aaPredicted RBP11.17□□□□□ -0.62
SEC13-206ENST00000397102 MGAT4AQ9UM21 535 aa11.17□□□□□ -0.62
SEC13-206ENST00000397102 SPRY2O43597 315 aa11.16□□□□□ -0.62
SEC13-206ENST00000397102 CBLN1P23435 193 aa11.16□□□□□ -0.62
SEC13-206ENST00000397102 RPS27AP62979 156 aaKnown RBP11.16□□□□□ -0.62
SEC13-206ENST00000397102 ZNF45Q02386 682 aa11.16□□□□□ -0.62
SEC13-206ENST00000397102 ANKRD55Q3KP44 614 aa11.16□□□□□ -0.62
SEC13-206ENST00000397102 ZNF57Q68EA5 555 aaPredicted RBP11.16□□□□□ -0.62
SEC13-206ENST00000397102 ZFP41Q8N8Y5 198 aa11.16□□□□□ -0.62
SEC13-206ENST00000397102 SRSF12Q8WXF0 261 aaKnown RBP11.16□□□□□ -0.62
SEC13-206ENST00000397102 DERL3Q96Q80 235 aa11.16□□□□□ -0.62
SEC13-206ENST00000397102 TMEM59Q9BXS4 323 aa11.16□□□□□ -0.62
SEC13-206ENST00000397102 DMRT1Q9Y5R6 373 aa11.16□□□□□ -0.62
SEC13-206ENST00000397102 PPP5D1E7EU14 171 aa11.15□□□□□ -0.62
SEC13-206ENST00000397102 SHOXO15266 292 aa11.15□□□□□ -0.62
SEC13-206ENST00000397102 MPPED1O15442 326 aa11.15□□□□□ -0.62
SEC13-206ENST00000397102 GGCTO75223 188 aaKnown RBP11.15□□□□□ -0.62
SEC13-206ENST00000397102 PRH1P02810 166 aa11.15□□□□□ -0.62
SEC13-206ENST00000397102 MYL12AP19105 171 aa11.15□□□□□ -0.62
SEC13-206ENST00000397102 HTR2CP28335 458 aa11.15□□□□□ -0.62
SEC13-206ENST00000397102 APOC4P55056 127 aa11.15□□□□□ -0.62
SEC13-206ENST00000397102 CBX3Q13185 183 aa11.15□□□□□ -0.62
SEC13-206ENST00000397102 TNXAQ16473 311 aa11.15□□□□□ -0.62
SEC13-206ENST00000397102 SMN1Q16637 294 aaKnown RBP11.15□□□□□ -0.62
SEC13-206ENST00000397102 TMEM177Q53S58 311 aa11.15□□□□□ -0.62
SEC13-206ENST00000397102 OR10K2Q6IF99 312 aa11.15□□□□□ -0.62
SEC13-206ENST00000397102 CBR4Q8N4T8 237 aa11.15□□□□□ -0.62
SEC13-206ENST00000397102 TMEM217Q8N7C4 229 aa11.15□□□□□ -0.62
SEC13-206ENST00000397102 NECAP1Q8NC96 275 aa11.15□□□□□ -0.62
SEC13-206ENST00000397102 PHLDA1Q8WV24 401 aaPredicted RBP11.15□□□□□ -0.62
SEC13-206ENST00000397102 CACNG8Q8WXS5 425 aa11.15□□□□□ -0.62
SEC13-206ENST00000397102 NICN1Q9BSH3 213 aa11.15□□□□□ -0.62
SEC13-206ENST00000397102 TM2D1Q9BX74 207 aa11.15□□□□□ -0.62
SEC13-206ENST00000397102 PLEKHJ1Q9NW61 149 aa11.15□□□□□ -0.62
SEC13-206ENST00000397102 EXOSC1Q9Y3B2 195 aaKnown RBP11.15□□□□□ -0.62
SEC13-206ENST00000397102 LOC100130705A0A1B0GUX0 176 aa11.14□□□□□ -0.63
SEC13-206ENST00000397102 IRGMA1A4Y4 181 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms