RNA–Protein interactions for RNA: ENST00000396548.5

TRIM39-204, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-204ENST00000396548 CENPEQ02224 2701 aa10.35□□□□□ -0.75
TRIM39-204ENST00000396548 S1PR2O95136 353 aa10.35□□□□□ -0.75
TRIM39-204ENST00000396548 MBPP02686 304 aaPredicted RBP10.35□□□□□ -0.75
TRIM39-204ENST00000396548 RAB32Q13637 225 aa10.35□□□□□ -0.75
TRIM39-204ENST00000396548 SPAG16Q8N0X2 631 aa10.35□□□□□ -0.75
TRIM39-204ENST00000396548 C17orf50Q8WW18 174 aa10.35□□□□□ -0.75
TRIM39-204ENST00000396548 PIMREGQ9BSJ6 248 aa10.35□□□□□ -0.75
TRIM39-204ENST00000396548 UNKLQ9H9P5 680 aaKnown RBP10.35□□□□□ -0.75
TRIM39-204ENST00000396548 ZNF16P17020 682 aaPredicted RBP10.34□□□□□ -0.75
TRIM39-204ENST00000396548 SSTR2P30874 369 aa10.34□□□□□ -0.75
TRIM39-204ENST00000396548 FAM219AQ8IW50 185 aa10.34□□□□□ -0.75
TRIM39-204ENST00000396548 BEND2Q8NDZ0 799 aa10.34□□□□□ -0.75
TRIM39-204ENST00000396548 OR5AC2Q9NZP5 309 aa10.34□□□□□ -0.75
TRIM39-204ENST00000396548 AKAP9Q99996 3911 aa10.34□□□□□ -0.75
TRIM39-204ENST00000396548 APCP25054 2843 aa10.34□□□□□ -0.75
TRIM39-204ENST00000396548 IGHV4-30-2A0A087WSY4 118 aa10.34□□□□□ -0.75
TRIM39-204ENST00000396548 PIGBOS1A0A0B4J2F0 54 aa10.34□□□□□ -0.75
TRIM39-204ENST00000396548 LY6LH3BQJ8 138 aa10.34□□□□□ -0.75
TRIM39-204ENST00000396548 PRSS54Q6PEW0 395 aa10.34□□□□□ -0.75
TRIM39-204ENST00000396548 SPTAN1Q13813 2472 aaKnown RBP10.34□□□□□ -0.75
TRIM39-204ENST00000396548 A0A096LNT2 108 aa10.34□□□□□ -0.75
TRIM39-204ENST00000396548 IGHV4-61A0A0C4DH41 118 aa10.34□□□□□ -0.75
TRIM39-204ENST00000396548 IGHV2-70DA0A0C4DH43 119 aa10.34□□□□□ -0.75
TRIM39-204ENST00000396548 RNF222A6NCQ9 220 aa10.34□□□□□ -0.75
TRIM39-204ENST00000396548 THBS3P49746 956 aa10.34□□□□□ -0.75
TRIM39-204ENST00000396548 DIAPH2-AS1Q14236 149 aa10.34□□□□□ -0.75
TRIM39-204ENST00000396548 MIDNQ504T8 468 aa10.34□□□□□ -0.75
TRIM39-204ENST00000396548 OR11H6Q8NGC7 330 aa10.34□□□□□ -0.75
TRIM39-204ENST00000396548 CD300LFQ8TDQ1 290 aa10.34□□□□□ -0.75
TRIM39-204ENST00000396548 PERPQ96FX8 193 aa10.34□□□□□ -0.75
TRIM39-204ENST00000396548 SIRPDQ9H106 197 aa10.34□□□□□ -0.75
TRIM39-204ENST00000396548 HEXA-AS1Q9H8Q6 139 aa10.34□□□□□ -0.75
TRIM39-204ENST00000396548 SVEP1Q4LDE5 3571 aa10.34□□□□□ -0.75
TRIM39-204ENST00000396548 ARHGAP32A7KAX9 2087 aa10.33□□□□□ -0.76
TRIM39-204ENST00000396548 A0A1B0GU03 582 aa10.33□□□□□ -0.76
TRIM39-204ENST00000396548 FAM157AC9JC47 383 aa10.33□□□□□ -0.76
TRIM39-204ENST00000396548 DEDDO75618 318 aa10.33□□□□□ -0.76
TRIM39-204ENST00000396548 MMP9P14780 707 aa10.33□□□□□ -0.76
TRIM39-204ENST00000396548 ID3Q02535 119 aa10.33□□□□□ -0.76
TRIM39-204ENST00000396548 LRRC37A5PQ49AS3 106 aa10.33□□□□□ -0.76
TRIM39-204ENST00000396548 OR2B11Q5JQS5 317 aa10.33□□□□□ -0.76
TRIM39-204ENST00000396548 MARVELD3Q96A59 401 aa10.33□□□□□ -0.76
TRIM39-204ENST00000396548 PLEKHA2Q9HB19 425 aa10.33□□□□□ -0.76
TRIM39-204ENST00000396548 GSKIPQ9P0R6 139 aa10.33□□□□□ -0.76
TRIM39-204ENST00000396548 MBD2Q9UBB5 411 aa10.33□□□□□ -0.76
TRIM39-204ENST00000396548 ABCA2Q9BZC7 2435 aa10.33□□□□□ -0.76
TRIM39-204ENST00000396548 ODF3BA8MYP8 253 aa10.33□□□□□ -0.76
TRIM39-204ENST00000396548 K7EPK0 472 aa10.33□□□□□ -0.76
TRIM39-204ENST00000396548 KIR2DS2P43631 304 aa10.33□□□□□ -0.76
TRIM39-204ENST00000396548 DSCR9P59020 149 aa10.33□□□□□ -0.76
TRIM39-204ENST00000396548 ZNF816Q0VGE8 651 aaPredicted RBP10.33□□□□□ -0.76
TRIM39-204ENST00000396548 HLA-DRB5Q30154 266 aa10.33□□□□□ -0.76
TRIM39-204ENST00000396548 FAM71E2Q8N5Q1 922 aa10.33□□□□□ -0.76
TRIM39-204ENST00000396548 OR4P4Q8NGL7 312 aa10.33□□□□□ -0.76
TRIM39-204ENST00000396548 TMEM186Q96B77 213 aa10.33□□□□□ -0.76
TRIM39-204ENST00000396548 RRNAD1Q96FB5 475 aaKnown RBP10.33□□□□□ -0.76
TRIM39-204ENST00000396548 C1orf159Q96HA4 380 aa10.33□□□□□ -0.76
TRIM39-204ENST00000396548 ADTRPQ96IZ2 230 aa10.33□□□□□ -0.76
TRIM39-204ENST00000396548 COMMD9Q9P000 198 aa10.33□□□□□ -0.76
TRIM39-204ENST00000396548 ONECUT1Q9UBC0 465 aa10.33□□□□□ -0.76
TRIM39-204ENST00000396548 MMP24Q9Y5R2 645 aa10.33□□□□□ -0.76
TRIM39-204ENST00000396548 HPRT1P00492 218 aa10.32□□□□□ -0.76
TRIM39-204ENST00000396548 PRTN3P24158 256 aa10.32□□□□□ -0.76
TRIM39-204ENST00000396548 LDLRAD2Q5SZI1 272 aa10.32□□□□□ -0.76
TRIM39-204ENST00000396548 DMBX1Q8NFW5 382 aa10.32□□□□□ -0.76
TRIM39-204ENST00000396548 CLEC7AQ9BXN2 247 aa10.32□□□□□ -0.76
TRIM39-204ENST00000396548 MMP26Q9NRE1 261 aa10.32□□□□□ -0.76
TRIM39-204ENST00000396548 COA4Q9NYJ1 87 aa10.32□□□□□ -0.76
TRIM39-204ENST00000396548 RCL1Q9Y2P8 373 aaKnown RBP10.32□□□□□ -0.76
TRIM39-204ENST00000396548 HSPB11Q9Y547 144 aa10.32□□□□□ -0.76
TRIM39-204ENST00000396548 SNAPC5O75971 98 aa10.32□□□□□ -0.76
TRIM39-204ENST00000396548 IL6RP08887 468 aaPredicted RBP10.32□□□□□ -0.76
TRIM39-204ENST00000396548 ARF6P62330 175 aa10.32□□□□□ -0.76
TRIM39-204ENST00000396548 LCN2P80188 198 aa10.32□□□□□ -0.76
TRIM39-204ENST00000396548 IZUMO4Q1ZYL8 232 aa10.32□□□□□ -0.76
TRIM39-204ENST00000396548 AARDQ4LEZ3 155 aa10.32□□□□□ -0.76
TRIM39-204ENST00000396548 CLEC2AQ6UVW9 174 aa10.32□□□□□ -0.76
TRIM39-204ENST00000396548 ZNF546Q86UE3 836 aa10.32□□□□□ -0.76
TRIM39-204ENST00000396548 OR5AN1Q8NGI8 311 aa10.32□□□□□ -0.76
TRIM39-204ENST00000396548 OR1S1Q8NH92 325 aa10.32□□□□□ -0.76
TRIM39-204ENST00000396548 S1PR3Q99500 378 aa10.32□□□□□ -0.76
TRIM39-204ENST00000396548 KPTNQ9Y664 436 aa10.32□□□□□ -0.76
TRIM39-204ENST00000396548 POMT1Q9Y6A1 747 aa10.32□□□□□ -0.76
TRIM39-204ENST00000396548 FXYD6-FXYD2A0A087WZ82 144 aa10.32□□□□□ -0.76
TRIM39-204ENST00000396548 BUB1B-PAK6H3BSN5 160 aa10.32□□□□□ -0.76
TRIM39-204ENST00000396548 ENSAO43768 121 aaKnown RBP10.32□□□□□ -0.76
TRIM39-204ENST00000396548 FCGR3BO75015 233 aa10.32□□□□□ -0.76
TRIM39-204ENST00000396548 G6PCP35575 357 aa10.32□□□□□ -0.76
TRIM39-204ENST00000396548 PRB3Q04118 309 aaPredicted RBP10.32□□□□□ -0.76
TRIM39-204ENST00000396548 ZNF345Q14585 488 aa10.32□□□□□ -0.76
TRIM39-204ENST00000396548 MRPL20Q9BYC9 149 aaKnown RBP10.32□□□□□ -0.76
TRIM39-204ENST00000396548 BEX4Q9NWD9 120 aaPredicted RBP10.32□□□□□ -0.76
TRIM39-204ENST00000396548 GCN1Q92616 2671 aaKnown RBP10.31□□□□□ -0.76
TRIM39-204ENST00000396548 ARPC5O15511 151 aa10.31□□□□□ -0.76
TRIM39-204ENST00000396548 KCNAB3O43448 404 aa10.31□□□□□ -0.76
TRIM39-204ENST00000396548 SMCO1Q147U7 214 aa10.31□□□□□ -0.76
TRIM39-204ENST00000396548 CXorf66Q5JRM2 361 aaPredicted RBP10.31□□□□□ -0.76
TRIM39-204ENST00000396548 RBMXL1Q96E39 390 aaKnown RBP10.31□□□□□ -0.76
TRIM39-204ENST00000396548 SPIN2AQ99865 258 aa10.31□□□□□ -0.76
TRIM39-204ENST00000396548 SPIN2BQ9BPZ2 258 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms