RNA–Protein interactions for RNA: ENST00000394272.7

HDDC3-202, Transcript of HD domain containing 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene HDDC3, Length 1,880 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-202ENST00000394272 A0A1W2PR64 198 aa16.56■□□□□ 0.24
HDDC3-202ENST00000394272 A0A1W2PRV1 198 aa16.56■□□□□ 0.24
HDDC3-202ENST00000394272 KRTAP10-9P60411 292 aa16.56■□□□□ 0.24
HDDC3-202ENST00000394272 ZNF816Q0VGE8 651 aaPredicted RBP16.56■□□□□ 0.24
HDDC3-202ENST00000394272 FAM219AQ8IW50 185 aa16.56■□□□□ 0.24
HDDC3-202ENST00000394272 MBD2Q9UBB5 411 aa16.56■□□□□ 0.24
HDDC3-202ENST00000394272 IGHV2-26A0A0B4J1V2 119 aa16.56■□□□□ 0.24
HDDC3-202ENST00000394272 M0R1W7 72 aa16.56■□□□□ 0.24
HDDC3-202ENST00000394272 ARPC5O15511 151 aa16.56■□□□□ 0.24
HDDC3-202ENST00000394272 RBFOX2O43251 390 aaKnown RBP eCLIP16.56■□□□□ 0.24
HDDC3-202ENST00000394272 S1PR2O95136 353 aa16.56■□□□□ 0.24
HDDC3-202ENST00000394272 LYL1P12980 280 aa16.56■□□□□ 0.24
HDDC3-202ENST00000394272 CXCL2P19875 107 aa16.56■□□□□ 0.24
HDDC3-202ENST00000394272 THBS3P49746 956 aa16.56■□□□□ 0.24
HDDC3-202ENST00000394272 ZNF137PP52743 207 aa16.56■□□□□ 0.24
HDDC3-202ENST00000394272 DLX1P56177 255 aa16.56■□□□□ 0.24
HDDC3-202ENST00000394272 PAX2Q02962 417 aa16.56■□□□□ 0.24
HDDC3-202ENST00000394272 THAP6Q8TBB0 222 aa16.56■□□□□ 0.24
HDDC3-202ENST00000394272 TNFRSF14Q92956 283 aa16.56■□□□□ 0.24
HDDC3-202ENST00000394272 GPR146Q96CH1 333 aa16.56■□□□□ 0.24
HDDC3-202ENST00000394272 ANKRD17O75179 2603 aaKnown RBP16.55■□□□□ 0.24
HDDC3-202ENST00000394272 SLC25A6P12236 298 aa16.55■□□□□ 0.24
HDDC3-202ENST00000394272 FAM71F2Q6NXP2 309 aa16.55■□□□□ 0.24
HDDC3-202ENST00000394272 ZNF383Q8NA42 475 aa16.55■□□□□ 0.24
HDDC3-202ENST00000394272 OR10X1Q8NGY0 326 aa16.55■□□□□ 0.24
HDDC3-202ENST00000394272 ADTRPQ96IZ2 230 aa16.55■□□□□ 0.24
HDDC3-202ENST00000394272 PRELID3BQ9Y3B1 194 aa16.55■□□□□ 0.24
HDDC3-202ENST00000394272 FCGR3BO75015 233 aa16.54■□□□□ 0.24
HDDC3-202ENST00000394272 IGLV1-47P01700 117 aa16.54■□□□□ 0.24
HDDC3-202ENST00000394272 MBPP02686 304 aaPredicted RBP16.54■□□□□ 0.24
HDDC3-202ENST00000394272 CT45A6P0DMU7 189 aa16.54■□□□□ 0.24
HDDC3-202ENST00000394272 CT45A5P0DMU8 189 aa16.54■□□□□ 0.24
HDDC3-202ENST00000394272 CT45A7P0DMV0 189 aa16.54■□□□□ 0.24
HDDC3-202ENST00000394272 AKR1C2P52895 323 aa16.54■□□□□ 0.24
HDDC3-202ENST00000394272 ARF6P62330 175 aa16.54■□□□□ 0.24
HDDC3-202ENST00000394272 PRSS54Q6PEW0 395 aa16.54■□□□□ 0.24
HDDC3-202ENST00000394272 ZNF546Q86UE3 836 aa16.54■□□□□ 0.24
HDDC3-202ENST00000394272 ST6GALNAC6Q969X2 333 aa16.54■□□□□ 0.24
HDDC3-202ENST00000394272 TNFSF18Q9UNG2 199 aa16.54■□□□□ 0.24
HDDC3-202ENST00000394272 ABCA2Q9BZC7 2435 aa16.54■□□□□ 0.24
HDDC3-202ENST00000394272 A0A1B0GU03 582 aa16.54■□□□□ 0.24
HDDC3-202ENST00000394272 ENSAO43768 121 aaKnown RBP16.54■□□□□ 0.24
HDDC3-202ENST00000394272 PITX3O75364 302 aa16.54■□□□□ 0.24
HDDC3-202ENST00000394272 SNAPC5O75971 98 aa16.54■□□□□ 0.24
HDDC3-202ENST00000394272 P0C879 139 aa16.54■□□□□ 0.24
HDDC3-202ENST00000394272 PET100P0DJ07 73 aa16.54■□□□□ 0.24
HDDC3-202ENST00000394272 KIR2DS2P43631 304 aa16.54■□□□□ 0.24
HDDC3-202ENST00000394272 Q6ZRM9 215 aa16.54■□□□□ 0.24
HDDC3-202ENST00000394272 KIR3DL3Q8N743 410 aa16.54■□□□□ 0.24
HDDC3-202ENST00000394272 TMEM186Q96B77 213 aa16.54■□□□□ 0.24
HDDC3-202ENST00000394272 RRNAD1Q96FB5 475 aaKnown RBP16.54■□□□□ 0.24
HDDC3-202ENST00000394272 CLEC7AQ9BXN2 247 aa16.54■□□□□ 0.24
HDDC3-202ENST00000394272 PLEKHA2Q9HB19 425 aa16.54■□□□□ 0.24
HDDC3-202ENST00000394272 OR5AC2Q9NZP5 309 aa16.54■□□□□ 0.24
HDDC3-202ENST00000394272 POLQO75417 2590 aa16.53■□□□□ 0.24
HDDC3-202ENST00000394272 IGHV4-30-2A0A087WSY4 118 aa16.53■□□□□ 0.24
HDDC3-202ENST00000394272 IGHV4-61A0A0C4DH41 118 aa16.53■□□□□ 0.24
HDDC3-202ENST00000394272 HPRT1P00492 218 aa16.53■□□□□ 0.24
HDDC3-202ENST00000394272 S100A10P60903 97 aa16.53■□□□□ 0.24
HDDC3-202ENST00000394272 LCN2P80188 198 aa16.53■□□□□ 0.24
HDDC3-202ENST00000394272 THOC7Q6I9Y2 204 aaKnown RBP16.53■□□□□ 0.24
HDDC3-202ENST00000394272 C1orf122Q6ZSJ8 110 aa16.53■□□□□ 0.24
HDDC3-202ENST00000394272 BEND2Q8NDZ0 799 aa16.53■□□□□ 0.24
HDDC3-202ENST00000394272 MARVELD3Q96A59 401 aa16.53■□□□□ 0.24
HDDC3-202ENST00000394272 MMP24Q9Y5R2 645 aa16.53■□□□□ 0.24
HDDC3-202ENST00000394272 ABCA12Q86UK0 2595 aa16.53■□□□□ 0.24
HDDC3-202ENST00000394272 K7EPK0 472 aa16.52■□□□□ 0.24
HDDC3-202ENST00000394272 TOR1AO14656 332 aa16.52■□□□□ 0.24
HDDC3-202ENST00000394272 PRB3Q04118 309 aaPredicted RBP16.52■□□□□ 0.24
HDDC3-202ENST00000394272 IZUMO4Q1ZYL8 232 aa16.52■□□□□ 0.24
HDDC3-202ENST00000394272 HLA-DRB5Q30154 266 aa16.52■□□□□ 0.24
HDDC3-202ENST00000394272 FAM71E2Q8N5Q1 922 aa16.52■□□□□ 0.24
HDDC3-202ENST00000394272 OR1S1Q8NH92 325 aa16.52■□□□□ 0.24
HDDC3-202ENST00000394272 RNASE11Q8TAA1 199 aaKnown RBP16.52■□□□□ 0.24
HDDC3-202ENST00000394272 IGHV2-70DA0A0C4DH43 119 aa16.52■□□□□ 0.23
HDDC3-202ENST00000394272 DEDDO75618 318 aa16.52■□□□□ 0.23
HDDC3-202ENST00000394272 ATG12O94817 140 aa16.52■□□□□ 0.23
HDDC3-202ENST00000394272 SCGB1D2O95969 90 aa16.52■□□□□ 0.23
HDDC3-202ENST00000394272 KRASP01116 189 aa16.52■□□□□ 0.23
HDDC3-202ENST00000394272 EPHA1P21709 976 aa16.52■□□□□ 0.23
HDDC3-202ENST00000394272 PRTN3P24158 256 aa16.52■□□□□ 0.23
HDDC3-202ENST00000394272 G6PCP35575 357 aa16.52■□□□□ 0.23
HDDC3-202ENST00000394272 DSCR9P59020 149 aa16.52■□□□□ 0.23
HDDC3-202ENST00000394272 MFFQ9GZY8 342 aa16.52■□□□□ 0.23
HDDC3-202ENST00000394272 UNKLQ9H9P5 680 aaKnown RBP16.52■□□□□ 0.23
HDDC3-202ENST00000394272 ZFP57Q9NU63 452 aa16.52■□□□□ 0.23
HDDC3-202ENST00000394272 POLR3KQ9Y2Y1 108 aaPredicted RBP16.52■□□□□ 0.23
HDDC3-202ENST00000394272 KPTNQ9Y664 436 aa16.52■□□□□ 0.23
HDDC3-202ENST00000394272 RNF222A6NCQ9 220 aa16.51■□□□□ 0.23
HDDC3-202ENST00000394272 L7N2F9 121 aa16.51■□□□□ 0.23
HDDC3-202ENST00000394272 FOXH1O75593 365 aa16.51■□□□□ 0.23
HDDC3-202ENST00000394272 PRRX1P54821 245 aa16.51■□□□□ 0.23
HDDC3-202ENST00000394272 DIAPH2-AS1Q14236 149 aa16.51■□□□□ 0.23
HDDC3-202ENST00000394272 SMCO1Q147U7 214 aa16.51■□□□□ 0.23
HDDC3-202ENST00000394272 FOXRED2Q8IWF2 684 aa16.51■□□□□ 0.23
HDDC3-202ENST00000394272 OR4S2Q8NH73 311 aa16.51■□□□□ 0.23
HDDC3-202ENST00000394272 MRPL20Q9BYC9 149 aaKnown RBP16.51■□□□□ 0.23
HDDC3-202ENST00000394272 SIRT7Q9NRC8 400 aa16.51■□□□□ 0.23
HDDC3-202ENST00000394272 MMP26Q9NRE1 261 aa16.51■□□□□ 0.23
HDDC3-202ENST00000394272 CACNG5Q9UF02 275 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms